RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 GOLGA6L2Q8N9W4 650 aaPredicted RBP1.22□□□□□ -2.21
UBXN4-207ENST00000471246 OR11H4Q8NGC9 324 aa1.22□□□□□ -2.21
UBXN4-207ENST00000471246 OR5M8Q8NGP6 311 aa1.22□□□□□ -2.21
UBXN4-207ENST00000471246 OR52N5Q8NH56 324 aa1.22□□□□□ -2.21
UBXN4-207ENST00000471246 MOSPD2Q8NHP6 518 aa1.22□□□□□ -2.21
UBXN4-207ENST00000471246 VANGL1Q8TAA9 524 aaPredicted RBP1.22□□□□□ -2.21
UBXN4-207ENST00000471246 SMAP2Q8WU79 429 aaPredicted RBP1.22□□□□□ -2.21
UBXN4-207ENST00000471246 PHLDA1Q8WV24 401 aaPredicted RBP1.22□□□□□ -2.21
UBXN4-207ENST00000471246 IRGQQ8WZA9 623 aa1.22□□□□□ -2.21
UBXN4-207ENST00000471246 HDAC2Q92769 488 aaKnown RBP1.22□□□□□ -2.21
UBXN4-207ENST00000471246 AZIN2Q96A70 460 aa1.22□□□□□ -2.21
UBXN4-207ENST00000471246 LRRC59Q96AG4 307 aaKnown RBP1.22□□□□□ -2.21
UBXN4-207ENST00000471246 OMA1Q96E52 524 aa1.22□□□□□ -2.21
UBXN4-207ENST00000471246 SAT2Q96F10 170 aaPredicted RBP1.22□□□□□ -2.21
UBXN4-207ENST00000471246 USP28Q96RU2 1077 aa1.22□□□□□ -2.21
UBXN4-207ENST00000471246 KRT12Q99456 494 aa1.22□□□□□ -2.21
UBXN4-207ENST00000471246 PAFAH2Q99487 392 aa1.22□□□□□ -2.21
UBXN4-207ENST00000471246 GPATCH1Q9BRR8 931 aaKnown RBP1.22□□□□□ -2.21
UBXN4-207ENST00000471246 BTBD10Q9BSF8 475 aa1.22□□□□□ -2.21
UBXN4-207ENST00000471246 SPATC1LQ9H0A9 340 aa1.22□□□□□ -2.21
UBXN4-207ENST00000471246 UPF3AQ9H1J1 476 aaKnown RBP1.22□□□□□ -2.21
UBXN4-207ENST00000471246 KCNK15Q9H427 330 aa1.22□□□□□ -2.21
UBXN4-207ENST00000471246 ATP13A3Q9H7F0 1226 aa1.22□□□□□ -2.21
UBXN4-207ENST00000471246 TBC1D17Q9HA65 648 aa1.22□□□□□ -2.21
UBXN4-207ENST00000471246 CCDC177Q9NQR7 707 aaPredicted RBP1.22□□□□□ -2.21
UBXN4-207ENST00000471246 EIF2B3Q9NR50 452 aaKnown RBP1.22□□□□□ -2.21
UBXN4-207ENST00000471246 FGF21Q9NSA1 209 aa1.22□□□□□ -2.21
UBXN4-207ENST00000471246 ZNF701Q9NV72 531 aaPredicted RBP1.22□□□□□ -2.21
UBXN4-207ENST00000471246 P4HTMQ9NXG6 502 aa1.22□□□□□ -2.21
UBXN4-207ENST00000471246 WSB2Q9NYS7 404 aaPredicted RBP1.22□□□□□ -2.21
UBXN4-207ENST00000471246 CACNG4Q9UBN1 327 aa1.22□□□□□ -2.21
UBXN4-207ENST00000471246 SEC63Q9UGP8 760 aaKnown RBP1.22□□□□□ -2.21
UBXN4-207ENST00000471246 DAPK2Q9UIK4 370 aa1.22□□□□□ -2.21
UBXN4-207ENST00000471246 GRID1Q9ULK0 1009 aa1.22□□□□□ -2.21
UBXN4-207ENST00000471246 PLAGL1Q9UM63 463 aa1.22□□□□□ -2.21
UBXN4-207ENST00000471246 PPP1R3CQ9UQK1 317 aa1.22□□□□□ -2.21
UBXN4-207ENST00000471246 CSAG2Q9Y5P2 127 aa1.22□□□□□ -2.21
UBXN4-207ENST00000471246 ZHX2Q9Y6X8 837 aa1.22□□□□□ -2.21
UBXN4-207ENST00000471246 FER1L5A0AVI2 2057 aa1.22□□□□□ -2.21
UBXN4-207ENST00000471246 PRRC2AP48634 2157 aaKnown RBP1.21□□□□□ -2.22
UBXN4-207ENST00000471246 ZNF644Q9H582 1327 aaPredicted RBP1.21□□□□□ -2.22
UBXN4-207ENST00000471246 IGHV3OR16-10A0A075B7F0 116 aa1.21□□□□□ -2.22
UBXN4-207ENST00000471246 FEZF1A0PJY2 475 aa1.21□□□□□ -2.22
UBXN4-207ENST00000471246 ANKUB1A6NFN9 424 aa1.21□□□□□ -2.22
UBXN4-207ENST00000471246 ANKRD61A6NGH8 418 aa1.21□□□□□ -2.22
UBXN4-207ENST00000471246 C15orf61A6NNL5 157 aa1.21□□□□□ -2.22
UBXN4-207ENST00000471246 AGAP14A8MT82 685 aa1.21□□□□□ -2.22
UBXN4-207ENST00000471246 KPNA7A9QM74 516 aa1.21□□□□□ -2.22
UBXN4-207ENST00000471246 PTGES3LE9PB15 166 aa1.21□□□□□ -2.22
UBXN4-207ENST00000471246 SOCS3O14543 225 aa1.21□□□□□ -2.22
UBXN4-207ENST00000471246 CTDSP2O14595 271 aa1.21□□□□□ -2.22
UBXN4-207ENST00000471246 VILLO15195 856 aa1.21□□□□□ -2.22
UBXN4-207ENST00000471246 MAGEC1O60732 1142 aa1.21□□□□□ -2.22
UBXN4-207ENST00000471246 MED24O75448 989 aa1.21□□□□□ -2.22
UBXN4-207ENST00000471246 SRSF10O75494 262 aaKnown RBP1.21□□□□□ -2.22
UBXN4-207ENST00000471246 BAIAP3O94812 1187 aa1.21□□□□□ -2.22
UBXN4-207ENST00000471246 ZWINTO95229 277 aa1.21□□□□□ -2.22
UBXN4-207ENST00000471246 C22orf31O95567 290 aa1.21□□□□□ -2.22
UBXN4-207ENST00000471246 CYP2A7P20853 494 aa1.21□□□□□ -2.22
UBXN4-207ENST00000471246 TNFAIP3P21580 790 aa1.21□□□□□ -2.22
UBXN4-207ENST00000471246 PTPN3P26045 913 aa1.21□□□□□ -2.22
UBXN4-207ENST00000471246 SHC1P29353 583 aa1.21□□□□□ -2.22
UBXN4-207ENST00000471246 HNF4AP41235 474 aa1.21□□□□□ -2.22
UBXN4-207ENST00000471246 LEPRP48357 1165 aaKnown RBP1.21□□□□□ -2.22
UBXN4-207ENST00000471246 PAX9P55771 341 aa1.21□□□□□ -2.22
UBXN4-207ENST00000471246 HUNKP57058 714 aa1.21□□□□□ -2.22
UBXN4-207ENST00000471246 GUCY2DQ02846 1103 aa1.21□□□□□ -2.22
UBXN4-207ENST00000471246 LMOD3Q0VAK6 560 aa1.21□□□□□ -2.22
UBXN4-207ENST00000471246 RIGQ13278 110 aa1.21□□□□□ -2.22
UBXN4-207ENST00000471246 NECTIN1Q15223 517 aa1.21□□□□□ -2.22
UBXN4-207ENST00000471246 TAF1BQ53T94 588 aaPredicted RBP1.21□□□□□ -2.22
UBXN4-207ENST00000471246 RAB41Q5JT25 222 aa1.21□□□□□ -2.22
UBXN4-207ENST00000471246 WLSQ5T9L3 541 aa1.21□□□□□ -2.22
UBXN4-207ENST00000471246 KRT79Q5XKE5 535 aa1.21□□□□□ -2.22
UBXN4-207ENST00000471246 DHRS7BQ6IAN0 325 aaPredicted RBP1.21□□□□□ -2.22
UBXN4-207ENST00000471246 TMEM211Q6ICI0 200 aa1.21□□□□□ -2.22
UBXN4-207ENST00000471246 TMEM207Q6UWW9 146 aa1.21□□□□□ -2.22
UBXN4-207ENST00000471246 GPRIN3Q6ZVF9 776 aa1.21□□□□□ -2.22
UBXN4-207ENST00000471246 RSRC2Q7L4I2 434 aaKnown RBP1.21□□□□□ -2.22
UBXN4-207ENST00000471246 SZRD1Q7Z422 152 aa1.21□□□□□ -2.22
UBXN4-207ENST00000471246 MAATS1Q7Z4T9 603 aa1.21□□□□□ -2.22
UBXN4-207ENST00000471246 PTAR1Q7Z6K3 402 aaPredicted RBP1.21□□□□□ -2.22
UBXN4-207ENST00000471246 TBC1D1Q86TI0 1168 aaPredicted RBP1.21□□□□□ -2.22
UBXN4-207ENST00000471246 COMMD2Q86X83 199 aa1.21□□□□□ -2.22
UBXN4-207ENST00000471246 CDC20BQ86Y33 519 aa1.21□□□□□ -2.22
UBXN4-207ENST00000471246 TMEM139Q8IV31 216 aa1.21□□□□□ -2.22
UBXN4-207ENST00000471246 CDK20Q8IZL9 346 aa1.21□□□□□ -2.22
UBXN4-207ENST00000471246 C1orf131Q8NDD1 294 aaKnown RBP1.21□□□□□ -2.22
UBXN4-207ENST00000471246 NPEPL1Q8NDH3 523 aa1.21□□□□□ -2.22
UBXN4-207ENST00000471246 GPRC5AQ8NFJ5 357 aa1.21□□□□□ -2.22
UBXN4-207ENST00000471246 OR10G8Q8NGN5 311 aa1.21□□□□□ -2.22
UBXN4-207ENST00000471246 ZNF519Q8TB69 540 aa1.21□□□□□ -2.22
UBXN4-207ENST00000471246 CCDC107Q8WV48 283 aa1.21□□□□□ -2.22
UBXN4-207ENST00000471246 CENPTQ96BT3 561 aa1.21□□□□□ -2.22
UBXN4-207ENST00000471246 FAM120BQ96EK7 910 aaKnown RBP1.21□□□□□ -2.22
UBXN4-207ENST00000471246 MPP4Q96JB8 637 aa1.21□□□□□ -2.22
UBXN4-207ENST00000471246 FOXN4Q96NZ1 517 aa1.21□□□□□ -2.22
UBXN4-207ENST00000471246 NEK1Q96PY6 1258 aa1.21□□□□□ -2.22
UBXN4-207ENST00000471246 OLFM1Q99784 485 aa1.21□□□□□ -2.22
UBXN4-207ENST00000471246 URM1Q9BTM9 101 aaKnown RBP1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms