RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 VPS50Q96JG6 964 aa8.65□□□□□ -1.02
SYNGAP1-205ENST00000470232 BTBD6Q96KE9 485 aa8.65□□□□□ -1.02
SYNGAP1-205ENST00000470232 TTC25Q96NG3 672 aa8.65□□□□□ -1.02
SYNGAP1-205ENST00000470232 SNRNP25Q9BV90 132 aaKnown RBP8.65□□□□□ -1.02
SYNGAP1-205ENST00000470232 TRIM8Q9BZR9 551 aa8.65□□□□□ -1.02
SYNGAP1-205ENST00000470232 STMN4Q9H169 189 aaPredicted RBP8.65□□□□□ -1.02
SYNGAP1-205ENST00000470232 EPS8L2Q9H6S3 715 aa8.65□□□□□ -1.02
SYNGAP1-205ENST00000470232 PCDH9Q9HC56 1237 aa8.65□□□□□ -1.02
SYNGAP1-205ENST00000470232 PCMTD2Q9NV79 361 aa8.65□□□□□ -1.02
SYNGAP1-205ENST00000470232 P4HTMQ9NXG6 502 aa8.65□□□□□ -1.02
SYNGAP1-205ENST00000470232 GRHL1Q9NZI5 618 aa8.65□□□□□ -1.02
SYNGAP1-205ENST00000470232 PCYOX1Q9UHG3 505 aa8.65□□□□□ -1.02
SYNGAP1-205ENST00000470232 BTRCQ9Y297 605 aa8.65□□□□□ -1.02
SYNGAP1-205ENST00000470232 PCDHA3Q9Y5H8 950 aa8.65□□□□□ -1.02
SYNGAP1-205ENST00000470232 TRGV8A0A0C4DH27 118 aa8.64□□□□□ -1.03
SYNGAP1-205ENST00000470232 C5orf60A6NFR6 353 aa8.64□□□□□ -1.03
SYNGAP1-205ENST00000470232 SMIM23A6NLE4 172 aa8.64□□□□□ -1.03
SYNGAP1-205ENST00000470232 E7EQ34 232 aa8.64□□□□□ -1.03
SYNGAP1-205ENST00000470232 CCL21O00585 134 aa8.64□□□□□ -1.03
SYNGAP1-205ENST00000470232 KCNN4O15554 427 aa8.64□□□□□ -1.03
SYNGAP1-205ENST00000470232 PRICKLE3O43900 615 aaPredicted RBP8.64□□□□□ -1.03
SYNGAP1-205ENST00000470232 FAM155BO75949 473 aa8.64□□□□□ -1.03
SYNGAP1-205ENST00000470232 SHBGP04278 402 aa8.64□□□□□ -1.03
SYNGAP1-205ENST00000470232 PYGMP11217 842 aa8.64□□□□□ -1.03
SYNGAP1-205ENST00000470232 DRD4P21917 467 aa8.64□□□□□ -1.03
SYNGAP1-205ENST00000470232 CDH3P22223 829 aa8.64□□□□□ -1.03
SYNGAP1-205ENST00000470232 IL4RP24394 825 aa8.64□□□□□ -1.03
SYNGAP1-205ENST00000470232 PREPP48147 710 aa8.64□□□□□ -1.03
SYNGAP1-205ENST00000470232 FNTAP49354 379 aa8.64□□□□□ -1.03
SYNGAP1-205ENST00000470232 CASP6P55212 293 aa8.64□□□□□ -1.03
SYNGAP1-205ENST00000470232 IFT88Q13099 833 aa8.64□□□□□ -1.03
SYNGAP1-205ENST00000470232 DPYSQ14117 519 aa8.64□□□□□ -1.03
SYNGAP1-205ENST00000470232 SLMAPQ14BN4 828 aa8.64□□□□□ -1.03
SYNGAP1-205ENST00000470232 HIF1AQ16665 826 aa8.64□□□□□ -1.03
SYNGAP1-205ENST00000470232 CYP1B1Q16678 543 aa8.64□□□□□ -1.03
SYNGAP1-205ENST00000470232 ZNF648Q5T619 568 aaPredicted RBP8.64□□□□□ -1.03
SYNGAP1-205ENST00000470232 FAM69BQ5VUD6 431 aa8.64□□□□□ -1.03
SYNGAP1-205ENST00000470232 TTC27Q6P3X3 843 aa8.64□□□□□ -1.03
SYNGAP1-205ENST00000470232 CCDC137Q6PK04 289 aaKnown RBP8.64□□□□□ -1.03
SYNGAP1-205ENST00000470232 TMEM207Q6UWW9 146 aa8.64□□□□□ -1.03
SYNGAP1-205ENST00000470232 SPOCD1Q6ZMY3 1216 aa8.64□□□□□ -1.03
SYNGAP1-205ENST00000470232 MON1BQ7L1V2 547 aa8.64□□□□□ -1.03
SYNGAP1-205ENST00000470232 YTHDF3Q7Z739 585 aaKnown RBP8.64□□□□□ -1.03
SYNGAP1-205ENST00000470232 CPNE8Q86YQ8 564 aa8.64□□□□□ -1.03
SYNGAP1-205ENST00000470232 GPR135Q8IZ08 494 aa8.64□□□□□ -1.03
SYNGAP1-205ENST00000470232 CNPY4Q8N129 248 aa8.64□□□□□ -1.03
SYNGAP1-205ENST00000470232 TEX26Q8N6G2 289 aa8.64□□□□□ -1.03
SYNGAP1-205ENST00000470232 BEND7Q8N7W2 519 aaPredicted RBP8.64□□□□□ -1.03
SYNGAP1-205ENST00000470232 BRSK1Q8TDC3 778 aa8.64□□□□□ -1.03
SYNGAP1-205ENST00000470232 N4BP2L2Q92802 583 aaPredicted RBP8.64□□□□□ -1.03
SYNGAP1-205ENST00000470232 GLYATL1Q969I3 302 aa8.64□□□□□ -1.03
SYNGAP1-205ENST00000470232 PTERQ96BW5 349 aa8.64□□□□□ -1.03
SYNGAP1-205ENST00000470232 TRIM11Q96F44 468 aa8.64□□□□□ -1.03
SYNGAP1-205ENST00000470232 CNDP1Q96KN2 507 aa8.64□□□□□ -1.03
SYNGAP1-205ENST00000470232 SMIM14Q96QK8 99 aa8.64□□□□□ -1.03
SYNGAP1-205ENST00000470232 SLX1AQ9BQ83 275 aa8.64□□□□□ -1.03
SYNGAP1-205ENST00000470232 TDRD1Q9BXT4 1180 aaKnown RBP8.64□□□□□ -1.03
SYNGAP1-205ENST00000470232 ADGRE3Q9BY15 652 aa8.64□□□□□ -1.03
SYNGAP1-205ENST00000470232 FAM129AQ9BZQ8 928 aa8.64□□□□□ -1.03
SYNGAP1-205ENST00000470232 ZBTB20Q9HC78 741 aaPredicted RBP8.64□□□□□ -1.03
SYNGAP1-205ENST00000470232 C1GALT1Q9NS00 363 aa8.64□□□□□ -1.03
SYNGAP1-205ENST00000470232 PARVAQ9NVD7 372 aa8.64□□□□□ -1.03
SYNGAP1-205ENST00000470232 NDOR1Q9UHB4 597 aa8.64□□□□□ -1.03
SYNGAP1-205ENST00000470232 PTRH2Q9Y3E5 179 aaKnown RBP8.64□□□□□ -1.03
SYNGAP1-205ENST00000470232 TCRBV5S1A1TA0A578 114 aa8.63□□□□□ -1.03
SYNGAP1-205ENST00000470232 OR6C74A6NCV1 312 aa8.63□□□□□ -1.03
SYNGAP1-205ENST00000470232 ANKRD66B4E2M5 251 aa8.63□□□□□ -1.03
SYNGAP1-205ENST00000470232 MATN2O00339 956 aa8.63□□□□□ -1.03
SYNGAP1-205ENST00000470232 KLF7O75840 302 aaPredicted RBP8.63□□□□□ -1.03
SYNGAP1-205ENST00000470232 AGTP01019 485 aa8.63□□□□□ -1.03
SYNGAP1-205ENST00000470232 MSL3P1P0C860 447 aa8.63□□□□□ -1.03
SYNGAP1-205ENST00000470232 RARAP10276 462 aa8.63□□□□□ -1.03
SYNGAP1-205ENST00000470232 AGAP20933 346 aa8.63□□□□□ -1.03
SYNGAP1-205ENST00000470232 SMSP52788 366 aa8.63□□□□□ -1.03
SYNGAP1-205ENST00000470232 DCDC1P59894 354 aa8.63□□□□□ -1.03
SYNGAP1-205ENST00000470232 RBPJQ06330 500 aa8.63□□□□□ -1.03
SYNGAP1-205ENST00000470232 ABRQ12979 859 aa8.63□□□□□ -1.03
SYNGAP1-205ENST00000470232 CALCOCO2Q13137 446 aa8.63□□□□□ -1.03
SYNGAP1-205ENST00000470232 XRCC4Q13426 336 aa8.63□□□□□ -1.03
SYNGAP1-205ENST00000470232 PPP1R7Q15435 360 aa8.63□□□□□ -1.03
SYNGAP1-205ENST00000470232 SIX1Q15475 284 aaPredicted RBP8.63□□□□□ -1.03
SYNGAP1-205ENST00000470232 RPE65Q16518 533 aa8.63□□□□□ -1.03
SYNGAP1-205ENST00000470232 PTCHD3Q3KNS1 767 aa8.63□□□□□ -1.03
SYNGAP1-205ENST00000470232 PRAMEF17Q5VTA0 474 aa8.63□□□□□ -1.03
SYNGAP1-205ENST00000470232 TIGD7Q6NT04 549 aaPredicted RBP8.63□□□□□ -1.03
SYNGAP1-205ENST00000470232 ADGRD1Q6QNK2 874 aa8.63□□□□□ -1.03
SYNGAP1-205ENST00000470232 IGFL2Q6UWQ7 119 aa8.63□□□□□ -1.03
SYNGAP1-205ENST00000470232 CPLX4Q7Z7G2 160 aa8.63□□□□□ -1.03
SYNGAP1-205ENST00000470232 AMZ2Q86W34 360 aa8.63□□□□□ -1.03
SYNGAP1-205ENST00000470232 CCDC25Q86WR0 208 aa8.63□□□□□ -1.03
SYNGAP1-205ENST00000470232 TRAPPC5Q8IUR0 188 aa8.63□□□□□ -1.03
SYNGAP1-205ENST00000470232 ZNF295-AS1Q8N0V1 137 aa8.63□□□□□ -1.03
SYNGAP1-205ENST00000470232 OR2Y1Q8NGV0 311 aa8.63□□□□□ -1.03
SYNGAP1-205ENST00000470232 UHMK1Q8TAS1 419 aaKnown RBP8.63□□□□□ -1.03
SYNGAP1-205ENST00000470232 GDAP1Q8TB36 358 aa8.63□□□□□ -1.03
SYNGAP1-205ENST00000470232 FBXO25Q8TCJ0 367 aa8.63□□□□□ -1.03
SYNGAP1-205ENST00000470232 C14orf79Q96F83 325 aa8.63□□□□□ -1.03
SYNGAP1-205ENST00000470232 PGM2Q96G03 612 aa8.63□□□□□ -1.03
SYNGAP1-205ENST00000470232 CCDC120Q96HB5 630 aa8.63□□□□□ -1.03
SYNGAP1-205ENST00000470232 SEC16BQ96JE7 1060 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms