RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 RAB6BQ9NRW1 208 aa12.81□□□□□ -0.36
CPSF4-210ENST00000469897 IRAK4Q9NWZ3 460 aa12.81□□□□□ -0.36
CPSF4-210ENST00000469897 IFT80Q9P2H3 777 aaPredicted RBP12.81□□□□□ -0.36
CPSF4-210ENST00000469897 DHCR7Q9UBM7 475 aaKnown RBP12.81□□□□□ -0.36
CPSF4-210ENST00000469897 CIDEBQ9UHD4 219 aa12.81□□□□□ -0.36
CPSF4-210ENST00000469897 GPN3Q9UHW5 284 aaPredicted RBP12.81□□□□□ -0.36
CPSF4-210ENST00000469897 G3BP2Q9UN86 482 aaKnown RBP12.81□□□□□ -0.36
CPSF4-210ENST00000469897 PTRH2Q9Y3E5 179 aaKnown RBP12.81□□□□□ -0.36
CPSF4-210ENST00000469897 PCDHGB7Q9Y5F8 929 aa12.81□□□□□ -0.36
CPSF4-210ENST00000469897 CAPN6Q9Y6Q1 641 aa12.81□□□□□ -0.36
CPSF4-210ENST00000469897 ERI2A8K979 691 aaKnown RBP12.8□□□□□ -0.36
CPSF4-210ENST00000469897 MASP2O00187 686 aa12.8□□□□□ -0.36
CPSF4-210ENST00000469897 DPM1O60762 260 aa12.8□□□□□ -0.36
CPSF4-210ENST00000469897 SORBS2O94875 1100 aaKnown RBP12.8□□□□□ -0.36
CPSF4-210ENST00000469897 ALAS2P22557 587 aa12.8□□□□□ -0.36
CPSF4-210ENST00000469897 PEBP1P30086 187 aaKnown RBP12.8□□□□□ -0.36
CPSF4-210ENST00000469897 FDFT1P37268 417 aa12.8□□□□□ -0.36
CPSF4-210ENST00000469897 RRADP55042 308 aa12.8□□□□□ -0.36
CPSF4-210ENST00000469897 OASLQ15646 514 aaKnown RBP12.8□□□□□ -0.36
CPSF4-210ENST00000469897 KYNUQ16719 465 aa12.8□□□□□ -0.36
CPSF4-210ENST00000469897 FASTKD1Q53R41 847 aaKnown RBP12.8□□□□□ -0.36
CPSF4-210ENST00000469897 PRR30Q53SZ7 412 aaPredicted RBP12.8□□□□□ -0.36
CPSF4-210ENST00000469897 RHBDD2Q6NTF9 364 aa12.8□□□□□ -0.36
CPSF4-210ENST00000469897 RAB43Q86YS6 212 aa12.8□□□□□ -0.36
CPSF4-210ENST00000469897 TMEM151BQ8IW70 566 aa12.8□□□□□ -0.36
CPSF4-210ENST00000469897 TXLNBQ8N3L3 684 aa12.8□□□□□ -0.36
CPSF4-210ENST00000469897 RBMXL3Q8N7X1 1067 aaKnown RBP12.8□□□□□ -0.36
CPSF4-210ENST00000469897 SPC24Q8NBT2 197 aa12.8□□□□□ -0.36
CPSF4-210ENST00000469897 GBP5Q96PP8 586 aa12.8□□□□□ -0.36
CPSF4-210ENST00000469897 RANBP9Q96S59 729 aa12.8□□□□□ -0.36
CPSF4-210ENST00000469897 CASS4Q9NQ75 786 aa12.8□□□□□ -0.36
CPSF4-210ENST00000469897 CHRAC1Q9NRG0 131 aa12.8□□□□□ -0.36
CPSF4-210ENST00000469897 GPR83Q9NYM4 423 aa12.8□□□□□ -0.36
CPSF4-210ENST00000469897 CDYLQ9Y232 598 aa12.8□□□□□ -0.36
CPSF4-210ENST00000469897 PADI2Q9Y2J8 665 aa12.8□□□□□ -0.36
CPSF4-210ENST00000469897 RELNP78509 3460 aa12.79□□□□□ -0.36
CPSF4-210ENST00000469897 ZSCAN9O15535 394 aaPredicted RBP12.79□□□□□ -0.36
CPSF4-210ENST00000469897 CNOT3O75175 753 aaKnown RBP12.79□□□□□ -0.36
CPSF4-210ENST00000469897 ZSCAN5DPP0CG00 497 aa12.79□□□□□ -0.36
CPSF4-210ENST00000469897 CD9P21926 228 aa12.79□□□□□ -0.36
CPSF4-210ENST00000469897 GRIA3P42263 894 aa12.79□□□□□ -0.36
CPSF4-210ENST00000469897 PRAMEP78395 509 aa12.79□□□□□ -0.36
CPSF4-210ENST00000469897 ACVR1Q04771 509 aa12.79□□□□□ -0.36
CPSF4-210ENST00000469897 KIR2DS3Q14952 304 aa12.79□□□□□ -0.36
CPSF4-210ENST00000469897 SLC5A12Q1EHB4 618 aa12.79□□□□□ -0.36
CPSF4-210ENST00000469897 PLEKHN1Q494U1 663 aaPredicted RBP12.79□□□□□ -0.36
CPSF4-210ENST00000469897 DNAJC21Q5F1R6 531 aaKnown RBP12.79□□□□□ -0.36
CPSF4-210ENST00000469897 FHL5Q5TD97 284 aa12.79□□□□□ -0.36
CPSF4-210ENST00000469897 SLC6A19Q695T7 634 aa12.79□□□□□ -0.36
CPSF4-210ENST00000469897 AFTPHQ6ULP2 937 aa12.79□□□□□ -0.36
CPSF4-210ENST00000469897 SLC13A5Q86YT5 568 aaPredicted RBP12.79□□□□□ -0.36
CPSF4-210ENST00000469897 MCATQ8IVS2 390 aaKnown RBP12.79□□□□□ -0.36
CPSF4-210ENST00000469897 SLC22A15Q8IZD6 547 aa12.79□□□□□ -0.36
CPSF4-210ENST00000469897 KRT222Q8N1A0 295 aa12.79□□□□□ -0.36
CPSF4-210ENST00000469897 RNF10Q8N5U6 811 aaKnown RBP12.79□□□□□ -0.36
CPSF4-210ENST00000469897 Q8NA96 180 aa12.79□□□□□ -0.36
CPSF4-210ENST00000469897 PTERQ96BW5 349 aa12.79□□□□□ -0.36
CPSF4-210ENST00000469897 IL17FQ96PD4 163 aa12.79□□□□□ -0.36
CPSF4-210ENST00000469897 SMAD5Q99717 465 aaKnown RBP12.79□□□□□ -0.36
CPSF4-210ENST00000469897 C17orf62Q9BQA9 187 aa12.79□□□□□ -0.36
CPSF4-210ENST00000469897 NDC1Q9BTX1 674 aa12.79□□□□□ -0.36
CPSF4-210ENST00000469897 CARD6Q9BX69 1037 aa12.79□□□□□ -0.36
CPSF4-210ENST00000469897 CHRNA10Q9GZZ6 450 aa12.79□□□□□ -0.36
CPSF4-210ENST00000469897 TXLNGQ9NUQ3 528 aa12.79□□□□□ -0.36
CPSF4-210ENST00000469897 EURLQ9NYK6 297 aa12.79□□□□□ -0.36
CPSF4-210ENST00000469897 MAP10Q9P2G4 905 aa12.79□□□□□ -0.36
CPSF4-210ENST00000469897 NDOR1Q9UHB4 597 aa12.79□□□□□ -0.36
CPSF4-210ENST00000469897 ANAPC5Q9UJX4 755 aa12.79□□□□□ -0.36
CPSF4-210ENST00000469897 RIMKLBQ9ULI2 386 aa12.79□□□□□ -0.36
CPSF4-210ENST00000469897 GUCA1BQ9UMX6 200 aa12.79□□□□□ -0.36
CPSF4-210ENST00000469897 PLCL2Q9UPR0 1127 aa12.79□□□□□ -0.36
CPSF4-210ENST00000469897 TCP11X1B4DZS4 312 aa12.78□□□□□ -0.36
CPSF4-210ENST00000469897 F8W8V4 182 aa12.78□□□□□ -0.36
CPSF4-210ENST00000469897 PEX12O00623 359 aa12.78□□□□□ -0.36
CPSF4-210ENST00000469897 KRT86O43790 486 aa12.78□□□□□ -0.36
CPSF4-210ENST00000469897 KDM1AO60341 852 aa12.78□□□□□ -0.36
CPSF4-210ENST00000469897 GPC4O75487 556 aa12.78□□□□□ -0.36
CPSF4-210ENST00000469897 AGFG2O95081 481 aa12.78□□□□□ -0.36
CPSF4-210ENST00000469897 APRTP07741 180 aa12.78□□□□□ -0.36
CPSF4-210ENST00000469897 MAGP20916 626 aa12.78□□□□□ -0.36
CPSF4-210ENST00000469897 RPL22P35268 128 aaKnown RBP12.78□□□□□ -0.36
CPSF4-210ENST00000469897 FOLR3P41439 243 aa12.78□□□□□ -0.36
CPSF4-210ENST00000469897 GRB7Q14451 532 aa12.78□□□□□ -0.36
CPSF4-210ENST00000469897 SF1Q15637 639 aaKnown RBP12.78□□□□□ -0.36
CPSF4-210ENST00000469897 EIF2S3LQ2VIR3 472 aaKnown RBP12.78□□□□□ -0.36
CPSF4-210ENST00000469897 NKAIN1Q4KMZ8 207 aa12.78□□□□□ -0.36
CPSF4-210ENST00000469897 C4orf17Q53FE4 359 aa12.78□□□□□ -0.36
CPSF4-210ENST00000469897 SEL1L2Q5TEA6 688 aa12.78□□□□□ -0.36
CPSF4-210ENST00000469897 HIST2H2BCQ6DN03 193 aa12.78□□□□□ -0.36
CPSF4-210ENST00000469897 MRPL14Q6P1L8 145 aaKnown RBP12.78□□□□□ -0.36
CPSF4-210ENST00000469897 TLDC1Q6P9B6 456 aa12.78□□□□□ -0.36
CPSF4-210ENST00000469897 NLRP9Q7RTR0 991 aa12.78□□□□□ -0.36
CPSF4-210ENST00000469897 MRGPREQ86SM8 312 aa12.78□□□□□ -0.36
CPSF4-210ENST00000469897 LINC01555Q8NAE3 123 aa12.78□□□□□ -0.36
CPSF4-210ENST00000469897 LKAAEAR1Q8TD35 194 aa12.78□□□□□ -0.36
CPSF4-210ENST00000469897 ASZ1Q8WWH4 475 aa12.78□□□□□ -0.36
CPSF4-210ENST00000469897 C19orf60Q96EN9 201 aa12.78□□□□□ -0.36
CPSF4-210ENST00000469897 FER1L6-AS2Q96M78 137 aa12.78□□□□□ -0.36
CPSF4-210ENST00000469897 FRMD8P1Q9BZ68 369 aaPredicted RBP12.78□□□□□ -0.36
CPSF4-210ENST00000469897 SLC22A11Q9NSA0 550 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms