RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 UGT1A6P19224 532 aa17.21■□□□□ 0.35
MRPL28-208ENST00000469744 UGT1A1P22309 533 aa17.21■□□□□ 0.35
MRPL28-208ENST00000469744 UGT1A4P22310 534 aa17.21■□□□□ 0.35
MRPL28-208ENST00000469744 UGT1A3P35503 534 aa17.21■□□□□ 0.35
MRPL28-208ENST00000469744 FASLGP48023 281 aa17.21■□□□□ 0.35
MRPL28-208ENST00000469744 MAPK10P53779 464 aa17.21■□□□□ 0.35
MRPL28-208ENST00000469744 MSLNQ13421 630 aaPredicted RBP17.21■□□□□ 0.35
MRPL28-208ENST00000469744 RIPK1Q13546 671 aa17.21■□□□□ 0.35
MRPL28-208ENST00000469744 THOC5Q13769 683 aaKnown RBP17.21■□□□□ 0.35
MRPL28-208ENST00000469744 KRT72Q14CN4 511 aa17.21■□□□□ 0.35
MRPL28-208ENST00000469744 PCLAFQ15004 111 aa17.21■□□□□ 0.35
MRPL28-208ENST00000469744 CHRNA6Q15825 494 aa17.21■□□□□ 0.35
MRPL28-208ENST00000469744 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.21■□□□□ 0.35
MRPL28-208ENST00000469744 FBXW10Q5XX13 1052 aa17.21■□□□□ 0.35
MRPL28-208ENST00000469744 C16orf46Q6P387 395 aa17.21■□□□□ 0.35
MRPL28-208ENST00000469744 IYDQ6PHW0 289 aa17.21■□□□□ 0.35
MRPL28-208ENST00000469744 C2CD4AQ8NCU7 369 aaPredicted RBP17.21■□□□□ 0.35
MRPL28-208ENST00000469744 PPP1R14CQ8TAE6 165 aa17.21■□□□□ 0.35
MRPL28-208ENST00000469744 SREK1Q8WXA9 508 aaKnown RBP17.21■□□□□ 0.35
MRPL28-208ENST00000469744 ZNF778Q96MU6 729 aa17.21■□□□□ 0.35
MRPL28-208ENST00000469744 SLC38A3Q99624 504 aa17.21■□□□□ 0.35
MRPL28-208ENST00000469744 LRMDAQ9H2I8 198 aa17.21■□□□□ 0.35
MRPL28-208ENST00000469744 HACD3Q9P035 362 aa17.21■□□□□ 0.35
MRPL28-208ENST00000469744 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.21■□□□□ 0.35
MRPL28-208ENST00000469744 DCTN4Q9UJW0 460 aa17.21■□□□□ 0.35
MRPL28-208ENST00000469744 ARL5AQ9Y689 179 aa17.21■□□□□ 0.35
MRPL28-208ENST00000469744 ZNF106Q9H2Y7 1883 aaKnown RBP17.2■□□□□ 0.34
MRPL28-208ENST00000469744 GAPDHSO14556 408 aaPredicted RBP17.2■□□□□ 0.34
MRPL28-208ENST00000469744 CHUKO15111 745 aa17.2■□□□□ 0.34
MRPL28-208ENST00000469744 MGRN1O60291 552 aa17.2■□□□□ 0.34
MRPL28-208ENST00000469744 CDK14O94921 469 aa17.2■□□□□ 0.34
MRPL28-208ENST00000469744 F3P13726 295 aa17.2■□□□□ 0.34
MRPL28-208ENST00000469744 CPA3P15088 417 aa17.2■□□□□ 0.34
MRPL28-208ENST00000469744 ARNTP27540 789 aa17.2■□□□□ 0.34
MRPL28-208ENST00000469744 SPAM1P38567 509 aa17.2■□□□□ 0.34
MRPL28-208ENST00000469744 MLLT3P42568 568 aaPredicted RBP17.2■□□□□ 0.34
MRPL28-208ENST00000469744 ELF3P78545 371 aaPredicted RBP17.2■□□□□ 0.34
MRPL28-208ENST00000469744 SOWAHCQ53LP3 525 aaPredicted RBP17.2■□□□□ 0.34
MRPL28-208ENST00000469744 TAF1BQ53T94 588 aaPredicted RBP17.2■□□□□ 0.34
MRPL28-208ENST00000469744 TSTD2Q5T7W7 516 aa17.2■□□□□ 0.34
MRPL28-208ENST00000469744 BROXQ5VW32 411 aa17.2■□□□□ 0.34
MRPL28-208ENST00000469744 CYB5D1Q6P9G0 228 aa17.2■□□□□ 0.34
MRPL28-208ENST00000469744 CLNKQ7Z7G1 428 aa17.2■□□□□ 0.34
MRPL28-208ENST00000469744 LRRTM4Q86VH4 590 aa17.2■□□□□ 0.34
MRPL28-208ENST00000469744 ZNF547Q8IVP9 402 aa17.2■□□□□ 0.34
MRPL28-208ENST00000469744 RAB3IPQ96QF0 476 aaPredicted RBP17.2■□□□□ 0.34
MRPL28-208ENST00000469744 VPS35Q96QK1 796 aa17.2■□□□□ 0.34
MRPL28-208ENST00000469744 CMKLR1Q99788 373 aa17.2■□□□□ 0.34
MRPL28-208ENST00000469744 WWP1Q9H0M0 922 aa17.2■□□□□ 0.34
MRPL28-208ENST00000469744 SCHIP1Q9P0W5 487 aaPredicted RBP17.2■□□□□ 0.34
MRPL28-208ENST00000469744 HEY2Q9UBP5 337 aa17.2■□□□□ 0.34
MRPL28-208ENST00000469744 LNPEPQ9UIQ6 1025 aa17.2■□□□□ 0.34
MRPL28-208ENST00000469744 TLK1Q9UKI8 766 aa17.2■□□□□ 0.34
MRPL28-208ENST00000469744 PKP3Q9Y446 797 aa17.2■□□□□ 0.34
MRPL28-208ENST00000469744 SMG1Q96Q15 3661 aaKnown RBP17.2■□□□□ 0.34
MRPL28-208ENST00000469744 PRAMEF33A0A0G2JMD5 474 aa17.19■□□□□ 0.34
MRPL28-208ENST00000469744 A0A0G2JND7 137 aa17.19■□□□□ 0.34
MRPL28-208ENST00000469744 GLYATL1P3A0A0U1RQE8 302 aa17.19■□□□□ 0.34
MRPL28-208ENST00000469744 MROH6A6NGR9 719 aa17.19■□□□□ 0.34
MRPL28-208ENST00000469744 ZW10O43264 779 aa17.19■□□□□ 0.34
MRPL28-208ENST00000469744 VEGFDO43915 354 aa17.19■□□□□ 0.34
MRPL28-208ENST00000469744 PRAMEF10O60809 474 aa17.19■□□□□ 0.34
MRPL28-208ENST00000469744 VAPBO95292 243 aa17.19■□□□□ 0.34
MRPL28-208ENST00000469744 AHSGP02765 367 aa17.19■□□□□ 0.34
MRPL28-208ENST00000469744 CCL4P13236 92 aa17.19■□□□□ 0.34
MRPL28-208ENST00000469744 ZNF7P17097 686 aaPredicted RBP17.19■□□□□ 0.34
MRPL28-208ENST00000469744 CRABP2P29373 138 aa17.19■□□□□ 0.34
MRPL28-208ENST00000469744 HNRNPH1P31943 449 aaKnown RBP17.19■□□□□ 0.34
MRPL28-208ENST00000469744 MAPK9P45984 424 aa17.19■□□□□ 0.34
MRPL28-208ENST00000469744 CLN3Q13286 438 aa17.19■□□□□ 0.34
MRPL28-208ENST00000469744 CES4AQ5XG92 561 aa17.19■□□□□ 0.34
MRPL28-208ENST00000469744 CMC1Q7Z7K0 106 aa17.19■□□□□ 0.34
MRPL28-208ENST00000469744 MTDHQ86UE4 582 aaKnown RBP17.19■□□□□ 0.34
MRPL28-208ENST00000469744 TRAPPC5Q8IUR0 188 aa17.19■□□□□ 0.34
MRPL28-208ENST00000469744 AHCYL2Q96HN2 611 aaKnown RBP17.19■□□□□ 0.34
MRPL28-208ENST00000469744 TSNARE1Q96NA8 513 aa17.19■□□□□ 0.34
MRPL28-208ENST00000469744 SARS2Q9NP81 518 aaKnown RBP17.19■□□□□ 0.34
MRPL28-208ENST00000469744 FOXJ2Q9P0K8 574 aa17.19■□□□□ 0.34
MRPL28-208ENST00000469744 KCTD3Q9Y597 815 aa17.19■□□□□ 0.34
MRPL28-208ENST00000469744 KALRNO60229 2985 aa17.19■□□□□ 0.34
MRPL28-208ENST00000469744 TMEM114B3SHH9 223 aa17.18■□□□□ 0.34
MRPL28-208ENST00000469744 GPR89AB7ZAQ6 455 aa17.18■□□□□ 0.34
MRPL28-208ENST00000469744 KMOO15229 486 aa17.18■□□□□ 0.34
MRPL28-208ENST00000469744 HAUS5O94927 633 aa17.18■□□□□ 0.34
MRPL28-208ENST00000469744 GPR89BP0CG08 455 aa17.18■□□□□ 0.34
MRPL28-208ENST00000469744 MYL2P10916 166 aa17.18■□□□□ 0.34
MRPL28-208ENST00000469744 RPL10P27635 214 aaKnown RBP17.18■□□□□ 0.34
MRPL28-208ENST00000469744 CD151P48509 253 aa17.18■□□□□ 0.34
MRPL28-208ENST00000469744 SLC1A6P48664 564 aa17.18■□□□□ 0.34
MRPL28-208ENST00000469744 TMPRSS3P57727 454 aa17.18■□□□□ 0.34
MRPL28-208ENST00000469744 ACVR1Q04771 509 aa17.18■□□□□ 0.34
MRPL28-208ENST00000469744 TMEM115Q12893 351 aaPredicted RBP17.18■□□□□ 0.34
MRPL28-208ENST00000469744 TGIF1Q15583 401 aa17.18■□□□□ 0.34
MRPL28-208ENST00000469744 SNAP47Q5SQN1 464 aa17.18■□□□□ 0.34
MRPL28-208ENST00000469744 ARHGAP40Q5TG30 622 aa17.18■□□□□ 0.34
MRPL28-208ENST00000469744 NEPROQ6NW34 567 aa17.18■□□□□ 0.34
MRPL28-208ENST00000469744 SLC9B2Q86UD5 537 aa17.18■□□□□ 0.34
MRPL28-208ENST00000469744 WDR75Q8IWA0 830 aaKnown RBP17.18■□□□□ 0.34
MRPL28-208ENST00000469744 OR4D9Q8NGE8 314 aa17.18■□□□□ 0.34
MRPL28-208ENST00000469744 OR10G6Q8NH81 332 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms