RNA–Protein interactions for RNA: ENST00000468844.1

RPL39-202, Transcript of ribosomal protein L39, humanhuman

TSL 1 (best)

Gene RPL39, Length 1,915 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-202ENST00000468844 ZNF317Q96PQ6 595 aaPredicted RBP17.02■□□□□ 0.32
RPL39-202ENST00000468844 ELF4Q99607 663 aaPredicted RBP17.02■□□□□ 0.32
RPL39-202ENST00000468844 HGH1Q9BTY7 390 aa17.02■□□□□ 0.32
RPL39-202ENST00000468844 TRIT1Q9H3H1 467 aaKnown RBP17.02■□□□□ 0.32
RPL39-202ENST00000468844 ZNF395Q9H8N7 513 aaPredicted RBP17.02■□□□□ 0.32
RPL39-202ENST00000468844 CAPN10Q9HC96 672 aa17.02■□□□□ 0.32
RPL39-202ENST00000468844 WWOXQ9NZC7 414 aa17.02■□□□□ 0.32
RPL39-202ENST00000468844 STOX2Q9P2F5 926 aaPredicted RBP17.02■□□□□ 0.32
RPL39-202ENST00000468844 SPASTQ9UBP0 616 aa17.02■□□□□ 0.32
RPL39-202ENST00000468844 AQP9O43315 295 aa17.02■□□□□ 0.31
RPL39-202ENST00000468844 SNNO75324 88 aaPredicted RBP17.02■□□□□ 0.31
RPL39-202ENST00000468844 CFIP05156 583 aa17.02■□□□□ 0.31
RPL39-202ENST00000468844 DPP6P42658 865 aa17.02■□□□□ 0.31
RPL39-202ENST00000468844 GDF5P43026 501 aa17.02■□□□□ 0.31
RPL39-202ENST00000468844 CCR10P46092 362 aa17.02■□□□□ 0.31
RPL39-202ENST00000468844 HSPA7P48741 367 aa17.02■□□□□ 0.31
RPL39-202ENST00000468844 HNMTP50135 292 aa17.02■□□□□ 0.31
RPL39-202ENST00000468844 UNC50Q53HI1 259 aa17.02■□□□□ 0.31
RPL39-202ENST00000468844 ATG16L1Q676U5 607 aa17.02■□□□□ 0.31
RPL39-202ENST00000468844 OR9A1PQ8NGU1 263 aa17.02■□□□□ 0.31
RPL39-202ENST00000468844 MAGEC3Q8TD91 643 aa17.02■□□□□ 0.31
RPL39-202ENST00000468844 FERD3LQ96RJ6 166 aa17.02■□□□□ 0.31
RPL39-202ENST00000468844 NRTNQ99748 197 aa17.02■□□□□ 0.31
RPL39-202ENST00000468844 LRFN3Q9BTN0 628 aa17.02■□□□□ 0.31
RPL39-202ENST00000468844 MENTQ9BUN1 341 aa17.02■□□□□ 0.31
RPL39-202ENST00000468844 GSTO2Q9H4Y5 243 aa17.02■□□□□ 0.31
RPL39-202ENST00000468844 UCKL1Q9NWZ5 548 aa17.02■□□□□ 0.31
RPL39-202ENST00000468844 PLAGL1Q9UM63 463 aa17.02■□□□□ 0.31
RPL39-202ENST00000468844 TDRKHQ9Y2W6 561 aaKnown RBP17.02■□□□□ 0.31
RPL39-202ENST00000468844 TRBV23OR9-2A0A075B6M9 112 aa17.01■□□□□ 0.31
RPL39-202ENST00000468844 E2F3O00716 465 aa17.01■□□□□ 0.31
RPL39-202ENST00000468844 YY2O15391 372 aa17.01■□□□□ 0.31
RPL39-202ENST00000468844 ITM2AO43736 263 aa17.01■□□□□ 0.31
RPL39-202ENST00000468844 LYPLA1O75608 230 aaPredicted RBP17.01■□□□□ 0.31
RPL39-202ENST00000468844 SUPT7LO94864 414 aa17.01■□□□□ 0.31
RPL39-202ENST00000468844 GRK2P25098 689 aa17.01■□□□□ 0.31
RPL39-202ENST00000468844 GGT5P36269 586 aa17.01■□□□□ 0.31
RPL39-202ENST00000468844 SLC19A1P41440 591 aa17.01■□□□□ 0.31
RPL39-202ENST00000468844 ASPHQ12797 758 aa17.01■□□□□ 0.31
RPL39-202ENST00000468844 PCBP2Q15366 365 aaKnown RBP eCLIP17.01■□□□□ 0.31
RPL39-202ENST00000468844 SHBQ15464 509 aa17.01■□□□□ 0.31
RPL39-202ENST00000468844 IYDQ6PHW0 289 aa17.01■□□□□ 0.31
RPL39-202ENST00000468844 ZC3H14Q6PJT7 736 aaKnown RBP17.01■□□□□ 0.31
RPL39-202ENST00000468844 FAM47EQ6ZV65 393 aa17.01■□□□□ 0.31
RPL39-202ENST00000468844 RABEPKQ7Z6M1 372 aa17.01■□□□□ 0.31
RPL39-202ENST00000468844 RAB44Q7Z6P3 723 aaPredicted RBP17.01■□□□□ 0.31
RPL39-202ENST00000468844 FAM46DQ8NEK8 389 aa17.01■□□□□ 0.31
RPL39-202ENST00000468844 CEP76Q8TAP6 659 aa17.01■□□□□ 0.31
RPL39-202ENST00000468844 UBTD2Q8WUN7 234 aa17.01■□□□□ 0.31
RPL39-202ENST00000468844 ZNF480Q8WV37 535 aa17.01■□□□□ 0.31
RPL39-202ENST00000468844 FBXL8Q96CD0 374 aa17.01■□□□□ 0.31
RPL39-202ENST00000468844 NSUN5Q96P11 429 aaKnown RBP17.01■□□□□ 0.31
RPL39-202ENST00000468844 ATG10Q9H0Y0 220 aa17.01■□□□□ 0.31
RPL39-202ENST00000468844 PCTPQ9UKL6 214 aa17.01■□□□□ 0.31
RPL39-202ENST00000468844 RIF1Q5UIP0 2472 aaKnown RBP17.01■□□□□ 0.31
RPL39-202ENST00000468844 H2AFYO75367 372 aaKnown RBP17■□□□□ 0.31
RPL39-202ENST00000468844 SLC6A12P48065 614 aa17■□□□□ 0.31
RPL39-202ENST00000468844 RXRGP48443 463 aa17■□□□□ 0.31
RPL39-202ENST00000468844 SLC1A6P48664 564 aa17■□□□□ 0.31
RPL39-202ENST00000468844 SEC24CP53992 1094 aa17■□□□□ 0.31
RPL39-202ENST00000468844 OCRLQ01968 901 aa17■□□□□ 0.31
RPL39-202ENST00000468844 BNIP3Q12983 259 aa17■□□□□ 0.31
RPL39-202ENST00000468844 STX3Q13277 289 aa17■□□□□ 0.31
RPL39-202ENST00000468844 TUBB8Q3ZCM7 444 aa17■□□□□ 0.31
RPL39-202ENST00000468844 TRIM61Q5EBN2 209 aa17■□□□□ 0.31
RPL39-202ENST00000468844 TTC23LQ6PF05 361 aa17■□□□□ 0.31
RPL39-202ENST00000468844 SLC23A3Q6PIS1 610 aa17■□□□□ 0.31
RPL39-202ENST00000468844 AGTRAPQ6RW13 159 aa17■□□□□ 0.31
RPL39-202ENST00000468844 FRMD7Q6ZUT3 714 aa17■□□□□ 0.31
RPL39-202ENST00000468844 GKN2Q86XP6 184 aa17■□□□□ 0.31
RPL39-202ENST00000468844 TCAIMQ8N3R3 496 aa17■□□□□ 0.31
RPL39-202ENST00000468844 PPFIBP2Q8ND30 876 aa17■□□□□ 0.31
RPL39-202ENST00000468844 PYCR2Q96C36 320 aa17■□□□□ 0.31
RPL39-202ENST00000468844 PITPNM3Q9BZ71 974 aa17■□□□□ 0.31
RPL39-202ENST00000468844 CD244Q9BZW8 370 aa17■□□□□ 0.31
RPL39-202ENST00000468844 DRC3Q9H069 523 aa17■□□□□ 0.31
RPL39-202ENST00000468844 ZBTB26Q9HCK0 441 aa17■□□□□ 0.31
RPL39-202ENST00000468844 HEBP2Q9Y5Z4 205 aa17■□□□□ 0.31
RPL39-202ENST00000468844 LMO7DNF2Z398 122 aa17■□□□□ 0.31
RPL39-202ENST00000468844 EPN2O95208 641 aa17■□□□□ 0.31
RPL39-202ENST00000468844 CHRNGP07510 517 aa17■□□□□ 0.31
RPL39-202ENST00000468844 ARRB1P49407 418 aaPredicted RBP17■□□□□ 0.31
RPL39-202ENST00000468844 CDH13P55290 713 aa17■□□□□ 0.31
RPL39-202ENST00000468844 RCN2Q14257 317 aa17■□□□□ 0.31
RPL39-202ENST00000468844 ZNF423Q2M1K9 1284 aa17■□□□□ 0.31
RPL39-202ENST00000468844 PTCHD3Q3KNS1 767 aa17■□□□□ 0.31
RPL39-202ENST00000468844 CFAP157Q5JU67 520 aa17■□□□□ 0.31
RPL39-202ENST00000468844 ANKS6Q68DC2 871 aa17■□□□□ 0.31
RPL39-202ENST00000468844 FOXR1Q6PIV2 292 aa17■□□□□ 0.31
RPL39-202ENST00000468844 LSMEM2Q8N112 164 aa17■□□□□ 0.31
RPL39-202ENST00000468844 SFRP1Q8N474 314 aa17■□□□□ 0.31
RPL39-202ENST00000468844 LMNTD1Q8N9Z9 388 aa17■□□□□ 0.31
RPL39-202ENST00000468844 SLC37A2Q8TED4 501 aa17■□□□□ 0.31
RPL39-202ENST00000468844 ZDHHC1Q8WTX9 485 aa17■□□□□ 0.31
RPL39-202ENST00000468844 LOXL4Q96JB6 756 aa17■□□□□ 0.31
RPL39-202ENST00000468844 IL17FQ96PD4 163 aa17■□□□□ 0.31
RPL39-202ENST00000468844 SORT1Q99523 831 aa17■□□□□ 0.31
RPL39-202ENST00000468844 MVB12BQ9H7P6 319 aa17■□□□□ 0.31
RPL39-202ENST00000468844 TNPO3Q9Y5L0 923 aaKnown RBP17■□□□□ 0.31
RPL39-202ENST00000468844 TMEM114B3SHH9 223 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms