RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 SCYL1Q96KG9 808 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 GSDMCQ9BYG8 508 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 WWP1Q9H0M0 922 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 MLXIPLQ9NP71 852 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 ASXL3Q9C0F0 2248 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 ZNF292O60281 2723 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 ZFHX2Q9C0A1 2572 aaPredicted RBP6.69□□□□□ -1.34
SCAF4-204ENST00000467731 OR52A4PA6NMU1 304 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 IFRD1O00458 451 aaPredicted RBP6.69□□□□□ -1.34
SCAF4-204ENST00000467731 PLIN3O60664 434 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 PIAS2O75928 621 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 SBK3P0C264 359 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 MPC1LP0DKB6 136 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 TROVE2P10155 538 aaKnown RBP eCLIP6.69□□□□□ -1.34
SCAF4-204ENST00000467731 ACADLP28330 430 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 CCT8P50990 548 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 IL9RQ01113 521 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 BNIP3Q12983 259 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 CLCA4Q14CN2 919 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 ELOCQ15369 112 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 PPP1R3AQ16821 1122 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 UAP1L1Q3KQV9 507 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 TECRLQ5HYJ1 363 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 TCEAL6Q6IPX3 200 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 CYB5D1Q6P9G0 228 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 CCDC121Q6ZUS5 278 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 ANKRD42Q8N9B4 389 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 SUMF1Q8NBK3 374 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 RHEBL1Q8TAI7 183 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 MDM1Q8TC05 714 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 BCAS4Q8TDM0 211 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 ASB11Q8WXH4 323 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 TCEAL3Q969E4 200 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 C12orf66Q96MD2 445 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 FOPNLQ96NB1 174 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 ATOH8Q96SQ7 321 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 MRPL57Q9BQC6 102 aaKnown RBP6.69□□□□□ -1.34
SCAF4-204ENST00000467731 ZDHHC5Q9C0B5 715 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 TFB2MQ9H5Q4 396 aaKnown RBP6.69□□□□□ -1.34
SCAF4-204ENST00000467731 FAM86C1Q9NVL1 165 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 UCKL1Q9NWZ5 548 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 C6orf203Q9P0P8 240 aaPredicted RBP6.69□□□□□ -1.34
SCAF4-204ENST00000467731 SCHIP1Q9P0W5 487 aaPredicted RBP6.69□□□□□ -1.34
SCAF4-204ENST00000467731 TAAR2Q9P1P5 351 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 SLC6A14Q9UN76 642 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 PCDHGA5Q9Y5G8 931 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 KRT87PA6NCN2 255 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 A6NCN8 305 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 TMEM247A6NEH6 219 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 GFYI3L273 518 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 TM9SF1O15321 606 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 AQP9O43315 295 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 PSIP1O75475 530 aaKnown RBP6.69□□□□□ -1.34
SCAF4-204ENST00000467731 SNRNP200O75643 2136 aaKnown RBP6.69□□□□□ -1.34
SCAF4-204ENST00000467731 PROCP04070 461 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 F3P13726 295 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 ETV4P43268 484 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 ARRB1P49407 418 aaPredicted RBP6.69□□□□□ -1.34
SCAF4-204ENST00000467731 KPNA2P52292 529 aaKnown RBP6.69□□□□□ -1.34
SCAF4-204ENST00000467731 SHBQ15464 509 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 PHKG1Q16816 387 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 HLA-BQ31612 363 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 CCDC153Q494R4 210 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 LAIR1Q6GTX8 287 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 DUS1LQ6P1R4 473 aaKnown RBP6.69□□□□□ -1.34
SCAF4-204ENST00000467731 FRA10AC1Q70Z53 315 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 UBE2R2Q712K3 238 aaPredicted RBP6.69□□□□□ -1.34
SCAF4-204ENST00000467731 ADAMTSL2Q86TH1 951 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 SFTPA2Q8IWL1 248 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 CCDC63Q8NA47 563 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 OR2I1PQ8NGU4 316 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 STAG3L4Q8TBR4 150 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 MGARPQ8TDB4 240 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 DYDC1Q8WWB3 177 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 PATE1Q8WXA2 126 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 TFGQ92734 400 aaPredicted RBP6.69□□□□□ -1.34
SCAF4-204ENST00000467731 EXT2Q93063 718 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 INSM2Q96T92 566 aaPredicted RBP6.69□□□□□ -1.34
SCAF4-204ENST00000467731 NUSAP1Q9BXS6 441 aaKnown RBP6.69□□□□□ -1.34
SCAF4-204ENST00000467731 MRPL46Q9H2W6 279 aaKnown RBP6.69□□□□□ -1.34
SCAF4-204ENST00000467731 GAREM1Q9H706 876 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 IL21RQ9HBE5 538 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 IMP3Q9NV31 184 aaKnown RBP6.69□□□□□ -1.34
SCAF4-204ENST00000467731 SPASTQ9UBP0 616 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 CIDEBQ9UHD4 219 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 PCOLCE2Q9UKZ9 415 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 RNF112Q9ULX5 631 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 ASF1AQ9Y294 204 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 RP1P56715 2156 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 NCF1BA6NI72 391 aaPredicted RBP6.68□□□□□ -1.34
SCAF4-204ENST00000467731 NCF1CA8MVU1 366 aaPredicted RBP6.68□□□□□ -1.34
SCAF4-204ENST00000467731 TARM1B6A8C7 271 aa6.68□□□□□ -1.34
SCAF4-204ENST00000467731 ARHGAP33O14559 1287 aa6.68□□□□□ -1.34
SCAF4-204ENST00000467731 YY2O15391 372 aa6.68□□□□□ -1.34
SCAF4-204ENST00000467731 KERAO60938 352 aa6.68□□□□□ -1.34
SCAF4-204ENST00000467731 ZWINTO95229 277 aa6.68□□□□□ -1.34
SCAF4-204ENST00000467731 C1orf105O95561 183 aa6.68□□□□□ -1.34
SCAF4-204ENST00000467731 GUCA1CO95843 209 aa6.68□□□□□ -1.34
SCAF4-204ENST00000467731 RBP1P09455 135 aa6.68□□□□□ -1.34
SCAF4-204ENST00000467731 NCF1P14598 390 aaPredicted RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms