RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 PTPRBP23467 1997 aa14.02□□□□□ -0.17
DNMT3A-208ENST00000466601 COL27A1Q8IZC6 1860 aaPredicted RBP14.01□□□□□ -0.17
DNMT3A-208ENST00000466601 PIPSLA2A3N6 862 aa14.01□□□□□ -0.17
DNMT3A-208ENST00000466601 GSAPA4D1B5 854 aa14.01□□□□□ -0.17
DNMT3A-208ENST00000466601 KRT87PA6NCN2 255 aa14.01□□□□□ -0.17
DNMT3A-208ENST00000466601 A8MU76 341 aa14.01□□□□□ -0.17
DNMT3A-208ENST00000466601 MYO1CO00159 1063 aa14.01□□□□□ -0.17
DNMT3A-208ENST00000466601 SLC16A5O15375 505 aa14.01□□□□□ -0.17
DNMT3A-208ENST00000466601 KRT38O76015 456 aa14.01□□□□□ -0.17
DNMT3A-208ENST00000466601 CHRM5P08912 532 aaPredicted RBP14.01□□□□□ -0.17
DNMT3A-208ENST00000466601 THRAP10827 490 aa14.01□□□□□ -0.17
DNMT3A-208ENST00000466601 CYP2A7P20853 494 aa14.01□□□□□ -0.17
DNMT3A-208ENST00000466601 CNTFP26441 200 aa14.01□□□□□ -0.17
DNMT3A-208ENST00000466601 GCAP28676 217 aa14.01□□□□□ -0.17
DNMT3A-208ENST00000466601 CRABP2P29373 138 aa14.01□□□□□ -0.17
DNMT3A-208ENST00000466601 HSD17B3P37058 310 aa14.01□□□□□ -0.17
DNMT3A-208ENST00000466601 PPP1CAP62136 330 aa14.01□□□□□ -0.17
DNMT3A-208ENST00000466601 SP140Q13342 867 aa14.01□□□□□ -0.17
DNMT3A-208ENST00000466601 TRA2AQ13595 282 aaKnown RBP eCLIP14.01□□□□□ -0.17
DNMT3A-208ENST00000466601 LGSNQ5TDP6 509 aa14.01□□□□□ -0.17
DNMT3A-208ENST00000466601 ADGRD1Q6QNK2 874 aa14.01□□□□□ -0.17
DNMT3A-208ENST00000466601 CMC1Q7Z7K0 106 aa14.01□□□□□ -0.17
DNMT3A-208ENST00000466601 RAB42Q8N4Z0 105 aa14.01□□□□□ -0.17
DNMT3A-208ENST00000466601 MCOLN3Q8TDD5 553 aa14.01□□□□□ -0.17
DNMT3A-208ENST00000466601 ANKRD7Q92527 254 aa14.01□□□□□ -0.17
DNMT3A-208ENST00000466601 DLG3Q92796 817 aa14.01□□□□□ -0.17
DNMT3A-208ENST00000466601 PKP4Q99569 1192 aa14.01□□□□□ -0.17
DNMT3A-208ENST00000466601 RAB11FIP5Q9BXF6 653 aa14.01□□□□□ -0.17
DNMT3A-208ENST00000466601 SLC12A9Q9BXP2 914 aa14.01□□□□□ -0.17
DNMT3A-208ENST00000466601 STRADBQ9C0K7 418 aa14.01□□□□□ -0.17
DNMT3A-208ENST00000466601 SPATA7Q9P0W8 599 aa14.01□□□□□ -0.17
DNMT3A-208ENST00000466601 FETUBQ9UGM5 382 aa14.01□□□□□ -0.17
DNMT3A-208ENST00000466601 LNPEPQ9UIQ6 1025 aa14.01□□□□□ -0.17
DNMT3A-208ENST00000466601 NEUROG3Q9Y4Z2 214 aa14.01□□□□□ -0.17
DNMT3A-208ENST00000466601 C2orf74A8MZ97 194 aa14□□□□□ -0.17
DNMT3A-208ENST00000466601 MATN2O00339 956 aa14□□□□□ -0.17
DNMT3A-208ENST00000466601 SYF2O95926 243 aaKnown RBP14□□□□□ -0.17
DNMT3A-208ENST00000466601 SHBGP04278 402 aa14□□□□□ -0.17
DNMT3A-208ENST00000466601 CCDC166P0CW27 439 aa14□□□□□ -0.17
DNMT3A-208ENST00000466601 SERPINB8P50452 374 aa14□□□□□ -0.17
DNMT3A-208ENST00000466601 FAM92BQ6ZTR7 304 aa14□□□□□ -0.17
DNMT3A-208ENST00000466601 C2orf73Q8N5S3 287 aaPredicted RBP14□□□□□ -0.17
DNMT3A-208ENST00000466601 LMNTD1Q8N9Z9 388 aa14□□□□□ -0.17
DNMT3A-208ENST00000466601 RCBTB1Q8NDN9 531 aa14□□□□□ -0.17
DNMT3A-208ENST00000466601 OR2L8Q8NGY9 312 aa14□□□□□ -0.17
DNMT3A-208ENST00000466601 DENND1AQ8TEH3 1009 aa14□□□□□ -0.17
DNMT3A-208ENST00000466601 LIN37Q96GY3 246 aaPredicted RBP14□□□□□ -0.17
DNMT3A-208ENST00000466601 CD180Q99467 661 aa14□□□□□ -0.17
DNMT3A-208ENST00000466601 DERL2Q9GZP9 239 aa14□□□□□ -0.17
DNMT3A-208ENST00000466601 PARVBQ9HBI1 364 aa14□□□□□ -0.17
DNMT3A-208ENST00000466601 SNX15Q9NRS6 342 aa14□□□□□ -0.17
DNMT3A-208ENST00000466601 ACTR10Q9NZ32 417 aa14□□□□□ -0.17
DNMT3A-208ENST00000466601 TLK1Q9UKI8 766 aa14□□□□□ -0.17
DNMT3A-208ENST00000466601 IKZF3Q9UKT9 509 aa14□□□□□ -0.17
DNMT3A-208ENST00000466601 PDE10AQ9Y233 779 aa14□□□□□ -0.17
DNMT3A-208ENST00000466601 MSRB2Q9Y3D2 182 aa14□□□□□ -0.17
DNMT3A-208ENST00000466601 CCDC187A0A096LP49 1063 aa13.99□□□□□ -0.17
DNMT3A-208ENST00000466601 AGRPO00253 132 aa13.99□□□□□ -0.17
DNMT3A-208ENST00000466601 CDC7O00311 574 aa13.99□□□□□ -0.17
DNMT3A-208ENST00000466601 HGSO14964 777 aaPredicted RBP13.99□□□□□ -0.17
DNMT3A-208ENST00000466601 TOX3O15405 576 aaPredicted RBP13.99□□□□□ -0.17
DNMT3A-208ENST00000466601 KIF1CO43896 1103 aaKnown RBP13.99□□□□□ -0.17
DNMT3A-208ENST00000466601 RASSF9O75901 435 aa13.99□□□□□ -0.17
DNMT3A-208ENST00000466601 KRT37O76014 449 aa13.99□□□□□ -0.17
DNMT3A-208ENST00000466601 ALDOAP04075 364 aaKnown RBP13.99□□□□□ -0.17
DNMT3A-208ENST00000466601 C2P06681 752 aa13.99□□□□□ -0.17
DNMT3A-208ENST00000466601 SNRPAP09012 282 aaKnown RBP13.99□□□□□ -0.17
DNMT3A-208ENST00000466601 HIST1H2AGP0C0S8 130 aaPredicted RBP13.99□□□□□ -0.17
DNMT3A-208ENST00000466601 SLC35E2BP0CK96 405 aa13.99□□□□□ -0.17
DNMT3A-208ENST00000466601 HIST1H2ADP20671 130 aa13.99□□□□□ -0.17
DNMT3A-208ENST00000466601 TYK2P29597 1187 aa13.99□□□□□ -0.17
DNMT3A-208ENST00000466601 PRDX3P30048 256 aaKnown RBP13.99□□□□□ -0.17
DNMT3A-208ENST00000466601 HSD17B2P37059 387 aa13.99□□□□□ -0.17
DNMT3A-208ENST00000466601 CSRP3P50461 194 aa13.99□□□□□ -0.17
DNMT3A-208ENST00000466601 KPNA2P52292 529 aaKnown RBP13.99□□□□□ -0.17
DNMT3A-208ENST00000466601 SHC2P98077 582 aa13.99□□□□□ -0.17
DNMT3A-208ENST00000466601 CAMK2BQ13554 666 aa13.99□□□□□ -0.17
DNMT3A-208ENST00000466601 CSHL1Q14406 222 aa13.99□□□□□ -0.17
DNMT3A-208ENST00000466601 KIR2DS3Q14952 304 aa13.99□□□□□ -0.17
DNMT3A-208ENST00000466601 ARHGAP19Q14CB8 494 aa13.99□□□□□ -0.17
DNMT3A-208ENST00000466601 C16orf72Q14CZ0 275 aa13.99□□□□□ -0.17
DNMT3A-208ENST00000466601 CYP2A13Q16696 494 aa13.99□□□□□ -0.17
DNMT3A-208ENST00000466601 PHKG1Q16816 387 aa13.99□□□□□ -0.17
DNMT3A-208ENST00000466601 CACHD1Q5VU97 1274 aa13.99□□□□□ -0.17
DNMT3A-208ENST00000466601 ANKS6Q68DC2 871 aa13.99□□□□□ -0.17
DNMT3A-208ENST00000466601 PRSS42Q7Z5A4 293 aa13.99□□□□□ -0.17
DNMT3A-208ENST00000466601 ARHGAP22Q7Z5H3 698 aa13.99□□□□□ -0.17
DNMT3A-208ENST00000466601 CCDC91Q7Z6B0 441 aa13.99□□□□□ -0.17
DNMT3A-208ENST00000466601 TBC1D1Q86TI0 1168 aaPredicted RBP13.99□□□□□ -0.17
DNMT3A-208ENST00000466601 SPATA6LQ8N4H0 392 aa13.99□□□□□ -0.17
DNMT3A-208ENST00000466601 LINC01555Q8NAE3 123 aa13.99□□□□□ -0.17
DNMT3A-208ENST00000466601 HIST1H2AHQ96KK5 128 aa13.99□□□□□ -0.17
DNMT3A-208ENST00000466601 UBXN10Q96LJ8 280 aa13.99□□□□□ -0.17
DNMT3A-208ENST00000466601 MAP3K3Q99759 626 aa13.99□□□□□ -0.17
DNMT3A-208ENST00000466601 HIST1H2AJQ99878 128 aa13.99□□□□□ -0.17
DNMT3A-208ENST00000466601 H2AFJQ9BTM1 129 aa13.99□□□□□ -0.17
DNMT3A-208ENST00000466601 TRIM54Q9BYV2 358 aa13.99□□□□□ -0.17
DNMT3A-208ENST00000466601 UNKQ9C0B0 810 aaKnown RBP13.99□□□□□ -0.17
DNMT3A-208ENST00000466601 TWSG1Q9GZX9 223 aa13.99□□□□□ -0.17
DNMT3A-208ENST00000466601 SPHK1Q9NYA1 384 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms