RNA–Protein interactions for RNA: ENST00000465003.5

APTX-213, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,991 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-213ENST00000465003 DCBLD1Q8N8Z6 715 aa11.52□□□□□ -0.57
APTX-213ENST00000465003 EPS8L3Q8TE67 593 aaKnown RBP11.52□□□□□ -0.57
APTX-213ENST00000465003 PMEPA1Q969W9 287 aa11.52□□□□□ -0.57
APTX-213ENST00000465003 PKP4Q99569 1192 aa11.52□□□□□ -0.57
APTX-213ENST00000465003 MAP3K3Q99759 626 aa11.52□□□□□ -0.57
APTX-213ENST00000465003 FUT8Q9BYC5 575 aa11.52□□□□□ -0.57
APTX-213ENST00000465003 SNX15Q9NRS6 342 aa11.52□□□□□ -0.57
APTX-213ENST00000465003 CORO1CQ9ULV4 474 aaPredicted RBP11.52□□□□□ -0.57
APTX-213ENST00000465003 NCF1BA6NI72 391 aaPredicted RBP11.51□□□□□ -0.57
APTX-213ENST00000465003 NCF1CA8MVU1 366 aaPredicted RBP11.51□□□□□ -0.57
APTX-213ENST00000465003 NRP2O60462 931 aa11.51□□□□□ -0.57
APTX-213ENST00000465003 PSIP1O75475 530 aaKnown RBP11.51□□□□□ -0.57
APTX-213ENST00000465003 GUCA1CO95843 209 aa11.51□□□□□ -0.57
APTX-213ENST00000465003 SLC16A8O95907 504 aa11.51□□□□□ -0.57
APTX-213ENST00000465003 SLC35E2BP0CK96 405 aa11.51□□□□□ -0.57
APTX-213ENST00000465003 CCDC166P0CW27 439 aa11.51□□□□□ -0.57
APTX-213ENST00000465003 NCF1P14598 390 aaPredicted RBP11.51□□□□□ -0.57
APTX-213ENST00000465003 SKIV2L2P42285 1042 aaKnown RBP11.51□□□□□ -0.57
APTX-213ENST00000465003 LSSP48449 732 aa11.51□□□□□ -0.57
APTX-213ENST00000465003 KPNA2P52292 529 aaKnown RBP11.51□□□□□ -0.57
APTX-213ENST00000465003 INHBCP55103 352 aa11.51□□□□□ -0.57
APTX-213ENST00000465003 POU4F1Q01851 419 aa11.51□□□□□ -0.57
APTX-213ENST00000465003 KCNAB1Q14722 419 aa11.51□□□□□ -0.57
APTX-213ENST00000465003 UNC5DQ6UXZ4 953 aa11.51□□□□□ -0.57
APTX-213ENST00000465003 OOSP2Q86WS3 158 aa11.51□□□□□ -0.57
APTX-213ENST00000465003 TMPRSS12Q86WS5 348 aa11.51□□□□□ -0.57
APTX-213ENST00000465003 FAM129CQ86XR2 697 aa11.51□□□□□ -0.57
APTX-213ENST00000465003 ADGRF3Q8IZF5 1079 aa11.51□□□□□ -0.57
APTX-213ENST00000465003 AVL9Q8NBF6 648 aa11.51□□□□□ -0.57
APTX-213ENST00000465003 ASB11Q8WXH4 323 aa11.51□□□□□ -0.57
APTX-213ENST00000465003 EXT2Q93063 718 aa11.51□□□□□ -0.57
APTX-213ENST00000465003 ACAT2Q9BWD1 397 aa11.51□□□□□ -0.57
APTX-213ENST00000465003 UCK1Q9HA47 277 aa11.51□□□□□ -0.57
APTX-213ENST00000465003 SATB2Q9UPW6 733 aa11.51□□□□□ -0.57
APTX-213ENST00000465003 IKBKGQ9Y6K9 419 aa11.51□□□□□ -0.57
APTX-213ENST00000465003 CEP295Q9C0D2 2601 aa11.51□□□□□ -0.57
APTX-213ENST00000465003 LOC400499M0QZD8 3231 aa11.51□□□□□ -0.57
APTX-213ENST00000465003 IGHV5-51A0A0C4DH38 117 aa11.5□□□□□ -0.57
APTX-213ENST00000465003 TRIM49D1C9J1S8 452 aa11.5□□□□□ -0.57
APTX-213ENST00000465003 ZBTB14O43829 449 aa11.5□□□□□ -0.57
APTX-213ENST00000465003 TCEA3O75764 348 aa11.5□□□□□ -0.57
APTX-213ENST00000465003 ABHD2P08910 425 aa11.5□□□□□ -0.57
APTX-213ENST00000465003 CHRM5P08912 532 aaPredicted RBP11.5□□□□□ -0.57
APTX-213ENST00000465003 THRAP10827 490 aa11.5□□□□□ -0.57
APTX-213ENST00000465003 CCL4P13236 92 aa11.5□□□□□ -0.57
APTX-213ENST00000465003 NDUFS1P28331 727 aa11.5□□□□□ -0.57
APTX-213ENST00000465003 PKLRP30613 574 aa11.5□□□□□ -0.57
APTX-213ENST00000465003 GLRBP48167 497 aa11.5□□□□□ -0.57
APTX-213ENST00000465003 RGS4P49798 205 aa11.5□□□□□ -0.57
APTX-213ENST00000465003 RAB10P61026 200 aa11.5□□□□□ -0.57
APTX-213ENST00000465003 SH3BP2P78314 561 aa11.5□□□□□ -0.57
APTX-213ENST00000465003 TSNQ15631 228 aaKnown RBP11.5□□□□□ -0.57
APTX-213ENST00000465003 ZKSCAN8Q15776 578 aaPredicted RBP11.5□□□□□ -0.57
APTX-213ENST00000465003 TMEM71Q6P5X7 295 aa11.5□□□□□ -0.57
APTX-213ENST00000465003 RBM12BQ8IXT5 1001 aaKnown RBP11.5□□□□□ -0.57
APTX-213ENST00000465003 EIF1ADQ8N9N8 165 aaKnown RBP11.5□□□□□ -0.57
APTX-213ENST00000465003 ALKBH8Q96BT7 664 aaKnown RBP11.5□□□□□ -0.57
APTX-213ENST00000465003 DEPDC7Q96QD5 511 aa11.5□□□□□ -0.57
APTX-213ENST00000465003 ZNF358Q9NW07 568 aa11.5□□□□□ -0.57
APTX-213ENST00000465003 PDE10AQ9Y233 779 aa11.5□□□□□ -0.57
APTX-213ENST00000465003 ADAMTS20P59510 1910 aa11.5□□□□□ -0.57
APTX-213ENST00000465003 GOLGA8RI6L899 631 aa11.5□□□□□ -0.57
APTX-213ENST00000465003 WISP3O95389 354 aaPredicted RBP11.5□□□□□ -0.57
APTX-213ENST00000465003 ENO3P13929 434 aaPredicted RBP11.5□□□□□ -0.57
APTX-213ENST00000465003 CD9P21926 228 aa11.5□□□□□ -0.57
APTX-213ENST00000465003 ATP5DP30049 168 aa11.5□□□□□ -0.57
APTX-213ENST00000465003 RAB28P51157 221 aa11.5□□□□□ -0.57
APTX-213ENST00000465003 ZFP36L1Q07352 338 aaKnown RBP11.5□□□□□ -0.57
APTX-213ENST00000465003 NAB1Q13506 487 aa11.5□□□□□ -0.57
APTX-213ENST00000465003 C18orf21Q32NC0 220 aaPredicted RBP11.5□□□□□ -0.57
APTX-213ENST00000465003 GALNT15Q8N3T1 639 aa11.5□□□□□ -0.57
APTX-213ENST00000465003 OR4D9Q8NGE8 314 aa11.5□□□□□ -0.57
APTX-213ENST00000465003 KCTD4Q8WVF5 259 aa11.5□□□□□ -0.57
APTX-213ENST00000465003 PTERQ96BW5 349 aa11.5□□□□□ -0.57
APTX-213ENST00000465003 CTRCQ99895 268 aa11.5□□□□□ -0.57
APTX-213ENST00000465003 ATG10Q9H0Y0 220 aa11.5□□□□□ -0.57
APTX-213ENST00000465003 VPS11Q9H270 941 aa11.5□□□□□ -0.57
APTX-213ENST00000465003 TFB2MQ9H5Q4 396 aaKnown RBP11.5□□□□□ -0.57
APTX-213ENST00000465003 GEMIN8Q9NWZ8 242 aaKnown RBP11.5□□□□□ -0.57
APTX-213ENST00000465003 OCIAD1Q9NX40 245 aa11.5□□□□□ -0.57
APTX-213ENST00000465003 ACTR10Q9NZ32 417 aa11.5□□□□□ -0.57
APTX-213ENST00000465003 POLG2Q9UHN1 485 aa11.5□□□□□ -0.57
APTX-213ENST00000465003 RAB21Q9UL25 225 aa11.5□□□□□ -0.57
APTX-213ENST00000465003 MN1Q10571 1320 aaPredicted RBP11.49□□□□□ -0.57
APTX-213ENST00000465003 PIPSLA2A3N6 862 aa11.49□□□□□ -0.57
APTX-213ENST00000465003 ISM1B1AKI9 464 aa11.49□□□□□ -0.57
APTX-213ENST00000465003 GFYI3L273 518 aa11.49□□□□□ -0.57
APTX-213ENST00000465003 RASGRF2O14827 1237 aa11.49□□□□□ -0.57
APTX-213ENST00000465003 CATP04040 527 aaKnown RBP11.49□□□□□ -0.57
APTX-213ENST00000465003 RPN2P04844 631 aa11.49□□□□□ -0.57
APTX-213ENST00000465003 MPC1LP0DKB6 136 aa11.49□□□□□ -0.57
APTX-213ENST00000465003 CBSLP0DN79 551 aa11.49□□□□□ -0.57
APTX-213ENST00000465003 UGT2B7P16662 529 aa11.49□□□□□ -0.57
APTX-213ENST00000465003 MAP4P27816 1152 aaKnown RBP11.49□□□□□ -0.57
APTX-213ENST00000465003 TYK2P29597 1187 aa11.49□□□□□ -0.57
APTX-213ENST00000465003 PRDX3P30048 256 aaKnown RBP11.49□□□□□ -0.57
APTX-213ENST00000465003 CBSP35520 551 aa11.49□□□□□ -0.57
APTX-213ENST00000465003 ETV5P41161 510 aa11.49□□□□□ -0.57
APTX-213ENST00000465003 PRKAA1Q13131 559 aa11.49□□□□□ -0.57
APTX-213ENST00000465003 CAMK2BQ13554 666 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms