RNA–Protein interactions for RNA: ENST00000464646.1

RPP40-203, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5 BASIC

Gene RPP40, Length 1,042 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-203ENST00000464646 KLHL20Q9Y2M5 609 aa13.35□□□□□ -0.27
RPP40-203ENST00000464646 AP1M2Q9Y6Q5 423 aa13.35□□□□□ -0.27
RPP40-203ENST00000464646 SEC16AO15027 2179 aa13.35□□□□□ -0.27
RPP40-203ENST00000464646 FLNBO75369 2602 aaKnown RBP13.35□□□□□ -0.27
RPP40-203ENST00000464646 SLC5A10A0PJK1 596 aa13.34□□□□□ -0.27
RPP40-203ENST00000464646 NDUFS3O75489 264 aa13.34□□□□□ -0.27
RPP40-203ENST00000464646 GNLYP22749 145 aa13.34□□□□□ -0.27
RPP40-203ENST00000464646 RORAP35398 523 aa13.34□□□□□ -0.27
RPP40-203ENST00000464646 DCDP81605 110 aaKnown RBP13.34□□□□□ -0.27
RPP40-203ENST00000464646 AARS2Q5JTZ9 985 aaKnown RBP13.34□□□□□ -0.27
RPP40-203ENST00000464646 MED25Q71SY5 747 aa13.34□□□□□ -0.27
RPP40-203ENST00000464646 GAS2L3Q86XJ1 694 aa13.34□□□□□ -0.27
RPP40-203ENST00000464646 TMEM139Q8IV31 216 aa13.34□□□□□ -0.27
RPP40-203ENST00000464646 FAM26EQ8N5C1 309 aa13.34□□□□□ -0.27
RPP40-203ENST00000464646 RNF10Q8N5U6 811 aaKnown RBP13.34□□□□□ -0.27
RPP40-203ENST00000464646 ZBTB2Q8N680 514 aa13.34□□□□□ -0.27
RPP40-203ENST00000464646 TMEM102Q8N9M5 508 aaPredicted RBP13.34□□□□□ -0.27
RPP40-203ENST00000464646 LMNTD1Q8N9Z9 388 aa13.34□□□□□ -0.27
RPP40-203ENST00000464646 FDCSPQ8NFU4 85 aa13.34□□□□□ -0.27
RPP40-203ENST00000464646 OR13J1Q8NGT2 312 aa13.34□□□□□ -0.27
RPP40-203ENST00000464646 ASZ1Q8WWH4 475 aa13.34□□□□□ -0.27
RPP40-203ENST00000464646 ZNF778Q96MU6 729 aa13.34□□□□□ -0.27
RPP40-203ENST00000464646 IL17FQ96PD4 163 aa13.34□□□□□ -0.27
RPP40-203ENST00000464646 DPH2Q9BQC3 489 aaPredicted RBP13.34□□□□□ -0.27
RPP40-203ENST00000464646 FRMD8P1Q9BZ68 369 aaPredicted RBP13.34□□□□□ -0.27
RPP40-203ENST00000464646 LRRC4CQ9HCJ2 640 aa13.34□□□□□ -0.27
RPP40-203ENST00000464646 OR6C2Q9NZP2 312 aa13.34□□□□□ -0.27
RPP40-203ENST00000464646 CDYLQ9Y232 598 aa13.34□□□□□ -0.27
RPP40-203ENST00000464646 TCAF1Q9Y4C2 921 aa13.34□□□□□ -0.27
RPP40-203ENST00000464646 PCDHGA9Q9Y5G4 932 aaKnown RBP13.34□□□□□ -0.27
RPP40-203ENST00000464646 SNRNP200O75643 2136 aaKnown RBP13.33□□□□□ -0.28
RPP40-203ENST00000464646 BHMG1C9JSJ3 638 aaPredicted RBP13.33□□□□□ -0.28
RPP40-203ENST00000464646 ZSCAN9O15535 394 aaPredicted RBP13.33□□□□□ -0.28
RPP40-203ENST00000464646 AGFG2O95081 481 aa13.33□□□□□ -0.28
RPP40-203ENST00000464646 ZSCAN5DPP0CG00 497 aa13.33□□□□□ -0.28
RPP40-203ENST00000464646 ACADLP28330 430 aa13.33□□□□□ -0.28
RPP40-203ENST00000464646 CCR7P32248 378 aa13.33□□□□□ -0.28
RPP40-203ENST00000464646 TSTA3Q13630 321 aaPredicted RBP13.33□□□□□ -0.28
RPP40-203ENST00000464646 KIR2DS3Q14952 304 aa13.33□□□□□ -0.28
RPP40-203ENST00000464646 SF1Q15637 639 aaKnown RBP13.33□□□□□ -0.28
RPP40-203ENST00000464646 ZIC1Q15915 447 aa13.33□□□□□ -0.28
RPP40-203ENST00000464646 CYP2A13Q16696 494 aa13.33□□□□□ -0.28
RPP40-203ENST00000464646 ZNF658BQ4V348 819 aaPredicted RBP13.33□□□□□ -0.28
RPP40-203ENST00000464646 DNAJC21Q5F1R6 531 aaKnown RBP13.33□□□□□ -0.28
RPP40-203ENST00000464646 ZNF789Q5FWF6 425 aa13.33□□□□□ -0.28
RPP40-203ENST00000464646 FHL5Q5TD97 284 aa13.33□□□□□ -0.28
RPP40-203ENST00000464646 ZNF517Q6ZMY9 492 aaPredicted RBP13.33□□□□□ -0.28
RPP40-203ENST00000464646 NLRP9Q7RTR0 991 aa13.33□□□□□ -0.28
RPP40-203ENST00000464646 CLEC1AQ8NC01 280 aa13.33□□□□□ -0.28
RPP40-203ENST00000464646 RANBP9Q96S59 729 aa13.33□□□□□ -0.28
RPP40-203ENST00000464646 DHRS4Q9BTZ2 278 aa13.33□□□□□ -0.28
RPP40-203ENST00000464646 NUDT9Q9BW91 350 aa13.33□□□□□ -0.28
RPP40-203ENST00000464646 AP1M1Q9BXS5 423 aa13.33□□□□□ -0.28
RPP40-203ENST00000464646 CHRAC1Q9NRG0 131 aa13.33□□□□□ -0.28
RPP40-203ENST00000464646 INTS7Q9NVH2 962 aaKnown RBP13.33□□□□□ -0.28
RPP40-203ENST00000464646 SRPK3Q9UPE1 567 aa13.33□□□□□ -0.28
RPP40-203ENST00000464646 PLCL2Q9UPR0 1127 aa13.33□□□□□ -0.28
RPP40-203ENST00000464646 NBASA2RRP1 2371 aa13.32□□□□□ -0.28
RPP40-203ENST00000464646 BLACEA4D250 179 aa13.32□□□□□ -0.28
RPP40-203ENST00000464646 CD3EAPO15446 510 aaKnown RBP13.32□□□□□ -0.28
RPP40-203ENST00000464646 HCRTR1O43613 425 aa13.32□□□□□ -0.28
RPP40-203ENST00000464646 CAPN1P07384 714 aa13.32□□□□□ -0.28
RPP40-203ENST00000464646 MAGP20916 626 aa13.32□□□□□ -0.28
RPP40-203ENST00000464646 GRIA3P42263 894 aa13.32□□□□□ -0.28
RPP40-203ENST00000464646 UQCRFS1P47985 274 aa13.32□□□□□ -0.28
RPP40-203ENST00000464646 RAB28P51157 221 aa13.32□□□□□ -0.28
RPP40-203ENST00000464646 EIF3BP55884 814 aaKnown RBP13.32□□□□□ -0.28
RPP40-203ENST00000464646 CRADDP78560 199 aa13.32□□□□□ -0.28
RPP40-203ENST00000464646 SEMA3AQ14563 771 aa13.32□□□□□ -0.28
RPP40-203ENST00000464646 SSPNQ14714 243 aa13.32□□□□□ -0.28
RPP40-203ENST00000464646 OASLQ15646 514 aaKnown RBP13.32□□□□□ -0.28
RPP40-203ENST00000464646 SLC5A12Q1EHB4 618 aa13.32□□□□□ -0.28
RPP40-203ENST00000464646 PCID2Q5JVF3 399 aa13.32□□□□□ -0.28
RPP40-203ENST00000464646 TLDC1Q6P9B6 456 aa13.32□□□□□ -0.28
RPP40-203ENST00000464646 TTLL10Q6ZVT0 673 aa13.32□□□□□ -0.28
RPP40-203ENST00000464646 VRK3Q8IV63 474 aa13.32□□□□□ -0.28
RPP40-203ENST00000464646 DCUN1D3Q8IWE4 304 aa13.32□□□□□ -0.28
RPP40-203ENST00000464646 RAB42Q8N4Z0 105 aa13.32□□□□□ -0.28
RPP40-203ENST00000464646 LKAAEAR1Q8TD35 194 aa13.32□□□□□ -0.28
RPP40-203ENST00000464646 ADAMTS17Q8TE56 1095 aa13.32□□□□□ -0.28
RPP40-203ENST00000464646 SLC22A18Q96BI1 424 aa13.32□□□□□ -0.28
RPP40-203ENST00000464646 FER1L6-AS2Q96M78 137 aa13.32□□□□□ -0.28
RPP40-203ENST00000464646 FOPNLQ96NB1 174 aa13.32□□□□□ -0.28
RPP40-203ENST00000464646 PANX3Q96QZ0 392 aa13.32□□□□□ -0.28
RPP40-203ENST00000464646 CARD6Q9BX69 1037 aa13.32□□□□□ -0.28
RPP40-203ENST00000464646 LZTFL1Q9NQ48 299 aa13.32□□□□□ -0.28
RPP40-203ENST00000464646 CASS4Q9NQ75 786 aa13.32□□□□□ -0.28
RPP40-203ENST00000464646 BFARQ9NZS9 450 aa13.32□□□□□ -0.28
RPP40-203ENST00000464646 GNPTGQ9UJJ9 305 aa13.32□□□□□ -0.28
RPP40-203ENST00000464646 PRMT5O14744 637 aaPredicted RBP13.31□□□□□ -0.28
RPP40-203ENST00000464646 SUN1O94901 812 aa13.31□□□□□ -0.28
RPP40-203ENST00000464646 CTSBP07858 339 aa13.31□□□□□ -0.28
RPP40-203ENST00000464646 CD63P08962 238 aa13.31□□□□□ -0.28
RPP40-203ENST00000464646 MSL3P1P0C860 447 aa13.31□□□□□ -0.28
RPP40-203ENST00000464646 PEBP1P30086 187 aaKnown RBP13.31□□□□□ -0.28
RPP40-203ENST00000464646 CDC25BP30305 580 aa13.31□□□□□ -0.28
RPP40-203ENST00000464646 PKLRP30613 574 aa13.31□□□□□ -0.28
RPP40-203ENST00000464646 RPL22P35268 128 aaKnown RBP13.31□□□□□ -0.28
RPP40-203ENST00000464646 BDKRB1P46663 353 aa13.31□□□□□ -0.28
RPP40-203ENST00000464646 TTPAP49638 278 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms