RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 ZBTB2Q8N680 514 aa16.52■□□□□ 0.24
VPS52-215ENST00000464425 CDKL2Q92772 493 aa16.52■□□□□ 0.24
VPS52-215ENST00000464425 RNF31Q96EP0 1072 aa16.52■□□□□ 0.24
VPS52-215ENST00000464425 ELMO2Q96JJ3 720 aa16.52■□□□□ 0.24
VPS52-215ENST00000464425 DDA1Q9BW61 102 aa16.52■□□□□ 0.24
VPS52-215ENST00000464425 ASPSCR1Q9BZE9 553 aa16.52■□□□□ 0.24
VPS52-215ENST00000464425 FBXO8Q9NRD0 319 aa16.52■□□□□ 0.24
VPS52-215ENST00000464425 SLC17A6Q9P2U8 582 aa16.52■□□□□ 0.24
VPS52-215ENST00000464425 PCDHGA3Q9Y5H0 932 aa16.52■□□□□ 0.24
VPS52-215ENST00000464425 KMT2BQ9UMN6 2715 aaPredicted RBP16.52■□□□□ 0.23
VPS52-215ENST00000464425 TLCD2A6NGC4 264 aa16.51■□□□□ 0.23
VPS52-215ENST00000464425 POLR1CO15160 346 aaPredicted RBP16.51■□□□□ 0.23
VPS52-215ENST00000464425 C1QAP02745 245 aa16.51■□□□□ 0.23
VPS52-215ENST00000464425 AHSGP02765 367 aa16.51■□□□□ 0.23
VPS52-215ENST00000464425 NELFEP18615 380 aaKnown RBP16.51■□□□□ 0.23
VPS52-215ENST00000464425 ABCG1P45844 678 aa16.51■□□□□ 0.23
VPS52-215ENST00000464425 ARL4DP49703 201 aa16.51■□□□□ 0.23
VPS52-215ENST00000464425 PMS2P54278 862 aa16.51■□□□□ 0.23
VPS52-215ENST00000464425 RAB15P59190 212 aa16.51■□□□□ 0.23
VPS52-215ENST00000464425 TLE3Q04726 772 aa16.51■□□□□ 0.23
VPS52-215ENST00000464425 CLN3Q13286 438 aa16.51■□□□□ 0.23
VPS52-215ENST00000464425 ACSBG2Q5FVE4 666 aa16.51■□□□□ 0.23
VPS52-215ENST00000464425 UNC5DQ6UXZ4 953 aa16.51■□□□□ 0.23
VPS52-215ENST00000464425 SIDT2Q8NBJ9 832 aaKnown RBP16.51■□□□□ 0.23
VPS52-215ENST00000464425 FBF1Q8TES7 1133 aa16.51■□□□□ 0.23
VPS52-215ENST00000464425 CRELD1Q96HD1 420 aa16.51■□□□□ 0.23
VPS52-215ENST00000464425 OR6C1Q96RD1 312 aa16.51■□□□□ 0.23
VPS52-215ENST00000464425 CD180Q99467 661 aa16.51■□□□□ 0.23
VPS52-215ENST00000464425 SLC30A3Q99726 388 aa16.51■□□□□ 0.23
VPS52-215ENST00000464425 DPH1Q9BZG8 443 aa16.51■□□□□ 0.23
VPS52-215ENST00000464425 B3GNT4Q9C0J1 378 aa16.51■□□□□ 0.23
VPS52-215ENST00000464425 SIDT1Q9NXL6 827 aaKnown RBP16.51■□□□□ 0.23
VPS52-215ENST00000464425 ACTR10Q9NZ32 417 aa16.51■□□□□ 0.23
VPS52-215ENST00000464425 SEMA5BQ9P283 1151 aa16.51■□□□□ 0.23
VPS52-215ENST00000464425 ACSL6Q9UKU0 697 aa16.51■□□□□ 0.23
VPS52-215ENST00000464425 POMT2Q9UKY4 750 aa16.51■□□□□ 0.23
VPS52-215ENST00000464425 NFS1Q9Y697 457 aa16.51■□□□□ 0.23
VPS52-215ENST00000464425 COMMD10Q9Y6G5 202 aa16.51■□□□□ 0.23
VPS52-215ENST00000464425 DSPP15924 2871 aaKnown RBP16.51■□□□□ 0.23
VPS52-215ENST00000464425 SLC9B1P1A6NJY1 282 aa16.5■□□□□ 0.23
VPS52-215ENST00000464425 RPN2P04844 631 aa16.5■□□□□ 0.23
VPS52-215ENST00000464425 CDH3P22223 829 aa16.5■□□□□ 0.23
VPS52-215ENST00000464425 GABRB3P28472 473 aa16.5■□□□□ 0.23
VPS52-215ENST00000464425 PRDX3P30048 256 aaKnown RBP16.5■□□□□ 0.23
VPS52-215ENST00000464425 SHMT2P34897 504 aa16.5■□□□□ 0.23
VPS52-215ENST00000464425 BDKRB1P46663 353 aa16.5■□□□□ 0.23
VPS52-215ENST00000464425 CLCN7P51798 805 aa16.5■□□□□ 0.23
VPS52-215ENST00000464425 NAB1Q13506 487 aa16.5■□□□□ 0.23
VPS52-215ENST00000464425 CEACAM20Q6UY09 585 aa16.5■□□□□ 0.23
VPS52-215ENST00000464425 DCUN1D3Q8IWE4 304 aa16.5■□□□□ 0.23
VPS52-215ENST00000464425 GSPT2Q8IYD1 628 aaKnown RBP16.5■□□□□ 0.23
VPS52-215ENST00000464425 C2orf73Q8N5S3 287 aaPredicted RBP16.5■□□□□ 0.23
VPS52-215ENST00000464425 LMNTD1Q8N9Z9 388 aa16.5■□□□□ 0.23
VPS52-215ENST00000464425 SLC41A2Q96JW4 573 aa16.5■□□□□ 0.23
VPS52-215ENST00000464425 IL17FQ96PD4 163 aa16.5■□□□□ 0.23
VPS52-215ENST00000464425 NDNQ99608 321 aa16.5■□□□□ 0.23
VPS52-215ENST00000464425 GPR21Q99679 349 aa16.5■□□□□ 0.23
VPS52-215ENST00000464425 AARSD1Q9BTE6 412 aaKnown RBP16.5■□□□□ 0.23
VPS52-215ENST00000464425 KLHL25Q9H0H3 589 aa16.5■□□□□ 0.23
VPS52-215ENST00000464425 SMYD2Q9NRG4 433 aa16.5■□□□□ 0.23
VPS52-215ENST00000464425 LATS2Q9NRM7 1088 aa16.5■□□□□ 0.23
VPS52-215ENST00000464425 CORO1CQ9ULV4 474 aaPredicted RBP16.5■□□□□ 0.23
VPS52-215ENST00000464425 MED16Q9Y2X0 877 aa16.5■□□□□ 0.23
VPS52-215ENST00000464425 ZFHX4Q86UP3 3567 aa16.49■□□□□ 0.23
VPS52-215ENST00000464425 PIPSLA2A3N6 862 aa16.49■□□□□ 0.23
VPS52-215ENST00000464425 CXorf49A8MYA2 514 aaPredicted RBP16.49■□□□□ 0.23
VPS52-215ENST00000464425 C2orf74A8MZ97 194 aa16.49■□□□□ 0.23
VPS52-215ENST00000464425 MATN2O00339 956 aa16.49■□□□□ 0.23
VPS52-215ENST00000464425 KDM1AO60341 852 aa16.49■□□□□ 0.23
VPS52-215ENST00000464425 ACSL3O95573 720 aa16.49■□□□□ 0.23
VPS52-215ENST00000464425 ZBTB11O95625 1053 aaPredicted RBP16.49■□□□□ 0.23
VPS52-215ENST00000464425 ABHD2P08910 425 aa16.49■□□□□ 0.23
VPS52-215ENST00000464425 CHRM5P08912 532 aaPredicted RBP16.49■□□□□ 0.23
VPS52-215ENST00000464425 EBLN1P0CF75 366 aa16.49■□□□□ 0.23
VPS52-215ENST00000464425 FOLR1P15328 257 aa16.49■□□□□ 0.23
VPS52-215ENST00000464425 CD82P27701 267 aa16.49■□□□□ 0.23
VPS52-215ENST00000464425 HSD11B2P80365 405 aa16.49■□□□□ 0.23
VPS52-215ENST00000464425 GBX1Q14549 363 aa16.49■□□□□ 0.23
VPS52-215ENST00000464425 KBTBD12Q3ZCT8 623 aa16.49■□□□□ 0.23
VPS52-215ENST00000464425 EMBQ6PCB8 327 aa16.49■□□□□ 0.23
VPS52-215ENST00000464425 TTC23LQ6PF05 361 aa16.49■□□□□ 0.23
VPS52-215ENST00000464425 GIMAP7Q8NHV1 300 aa16.49■□□□□ 0.23
VPS52-215ENST00000464425 AENQ8WTP8 325 aaKnown RBP16.49■□□□□ 0.23
VPS52-215ENST00000464425 KCNJ9Q92806 393 aa16.49■□□□□ 0.23
VPS52-215ENST00000464425 FOPNLQ96NB1 174 aa16.49■□□□□ 0.23
VPS52-215ENST00000464425 CYTH2Q99418 400 aa16.49■□□□□ 0.23
VPS52-215ENST00000464425 MCMBPQ9BTE3 642 aa16.49■□□□□ 0.23
VPS52-215ENST00000464425 ACSS3Q9H6R3 686 aa16.49■□□□□ 0.23
VPS52-215ENST00000464425 SOHLH2Q9NX45 425 aa16.49■□□□□ 0.23
VPS52-215ENST00000464425 SPHK1Q9NYA1 384 aa16.49■□□□□ 0.23
VPS52-215ENST00000464425 OR6C2Q9NZP2 312 aa16.49■□□□□ 0.23
VPS52-215ENST00000464425 PCDHB11Q9Y5F2 797 aa16.49■□□□□ 0.23
VPS52-215ENST00000464425 A0A087WUV0 522 aaPredicted RBP16.48■□□□□ 0.23
VPS52-215ENST00000464425 KRT87PA6NCN2 255 aa16.48■□□□□ 0.23
VPS52-215ENST00000464425 STMND1H3BQB6 276 aa16.48■□□□□ 0.23
VPS52-215ENST00000464425 RIPK2O43353 540 aa16.48■□□□□ 0.23
VPS52-215ENST00000464425 C1orf105O95561 183 aa16.48■□□□□ 0.23
VPS52-215ENST00000464425 LIPCP11150 499 aa16.48■□□□□ 0.23
VPS52-215ENST00000464425 PVRP15151 417 aa16.48■□□□□ 0.23
VPS52-215ENST00000464425 CD9P21926 228 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms