RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 P3H4Q92791 437 aa13.91□□□□□ -0.18
SMC1A-204ENST00000463684 SEMA3GQ9NS98 782 aa13.91□□□□□ -0.18
SMC1A-204ENST00000463684 DDX56Q9NY93 547 aaKnown RBP13.91□□□□□ -0.18
SMC1A-204ENST00000463684 SPHK1Q9NYA1 384 aa13.91□□□□□ -0.18
SMC1A-204ENST00000463684 EURLQ9NYK6 297 aa13.91□□□□□ -0.18
SMC1A-204ENST00000463684 OR6C2Q9NZP2 312 aa13.91□□□□□ -0.18
SMC1A-204ENST00000463684 RSPH14Q9UHP6 348 aa13.91□□□□□ -0.18
SMC1A-204ENST00000463684 NXT1Q9UKK6 140 aaKnown RBP13.91□□□□□ -0.18
SMC1A-204ENST00000463684 TRHDEQ9UKU6 1024 aa13.91□□□□□ -0.18
SMC1A-204ENST00000463684 CAPN11Q9UMQ6 739 aa13.91□□□□□ -0.18
SMC1A-204ENST00000463684 ASF1AQ9Y294 204 aa13.91□□□□□ -0.18
SMC1A-204ENST00000463684 LUC7L2Q9Y383 392 aaKnown RBP13.91□□□□□ -0.18
SMC1A-204ENST00000463684 CELSR1Q9NYQ6 3014 aa13.91□□□□□ -0.18
SMC1A-204ENST00000463684 DIDO1Q9BTC0 2240 aaKnown RBP13.9□□□□□ -0.18
SMC1A-204ENST00000463684 KDM1AO60341 852 aa13.9□□□□□ -0.18
SMC1A-204ENST00000463684 ANXA9O76027 345 aa13.9□□□□□ -0.18
SMC1A-204ENST00000463684 KLHL18O94889 574 aa13.9□□□□□ -0.18
SMC1A-204ENST00000463684 GSTM1P09488 218 aa13.9□□□□□ -0.18
SMC1A-204ENST00000463684 TNNT1P13805 278 aa13.9□□□□□ -0.18
SMC1A-204ENST00000463684 TDGF1P3P51864 188 aa13.9□□□□□ -0.18
SMC1A-204ENST00000463684 GEMP55040 296 aa13.9□□□□□ -0.18
SMC1A-204ENST00000463684 GSTM4Q03013 218 aa13.9□□□□□ -0.18
SMC1A-204ENST00000463684 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.9□□□□□ -0.182e-20■■■□□ 15.6
SMC1A-204ENST00000463684 GPR33Q49SQ1 333 aa13.9□□□□□ -0.18
SMC1A-204ENST00000463684 CLEC17AQ6ZS10 378 aa13.9□□□□□ -0.18
SMC1A-204ENST00000463684 SHISA6Q6ZSJ9 500 aa13.9□□□□□ -0.18
SMC1A-204ENST00000463684 MCATQ8IVS2 390 aaKnown RBP13.9□□□□□ -0.18
SMC1A-204ENST00000463684 TBC1D21Q8IYX1 336 aa13.9□□□□□ -0.18
SMC1A-204ENST00000463684 OR11G2Q8NGC1 345 aa13.9□□□□□ -0.18
SMC1A-204ENST00000463684 OR13C4Q8NGS5 318 aa13.9□□□□□ -0.18
SMC1A-204ENST00000463684 SLC35G2Q8TBE7 412 aa13.9□□□□□ -0.18
SMC1A-204ENST00000463684 NR4A3Q92570 626 aa13.9□□□□□ -0.18
SMC1A-204ENST00000463684 IQCDQ96DY2 449 aa13.9□□□□□ -0.18
SMC1A-204ENST00000463684 CCDC120Q96HB5 630 aa13.9□□□□□ -0.18
SMC1A-204ENST00000463684 SPSB2Q99619 263 aa13.9□□□□□ -0.18
SMC1A-204ENST00000463684 TRIM56Q9BRZ2 755 aaKnown RBP13.9□□□□□ -0.18
SMC1A-204ENST00000463684 ANP32EQ9BTT0 268 aa13.9□□□□□ -0.18
SMC1A-204ENST00000463684 FICDQ9BVA6 458 aa13.9□□□□□ -0.18
SMC1A-204ENST00000463684 PACSIN1Q9BY11 444 aa13.9□□□□□ -0.18
SMC1A-204ENST00000463684 SLC26A1Q9H2B4 701 aa13.9□□□□□ -0.18
SMC1A-204ENST00000463684 SOX17Q9H6I2 414 aaPredicted RBP13.9□□□□□ -0.18
SMC1A-204ENST00000463684 ZDHHC3Q9NYG2 299 aa13.9□□□□□ -0.18
SMC1A-204ENST00000463684 TDRKHQ9Y2W6 561 aaKnown RBP13.9□□□□□ -0.18
SMC1A-204ENST00000463684 TRAV17A0A0B4J275 112 aa13.89□□□□□ -0.19
SMC1A-204ENST00000463684 CST8O60676 142 aa13.89□□□□□ -0.19
SMC1A-204ENST00000463684 ONECUT2O95948 504 aa13.89□□□□□ -0.19
SMC1A-204ENST00000463684 TMEM253P0C7T8 217 aa13.89□□□□□ -0.19
SMC1A-204ENST00000463684 PECAM1P16284 738 aaPredicted RBP13.89□□□□□ -0.19
SMC1A-204ENST00000463684 FANCCQ00597 558 aa13.89□□□□□ -0.19
SMC1A-204ENST00000463684 KIR2DS3Q14952 304 aa13.89□□□□□ -0.19
SMC1A-204ENST00000463684 INAQ16352 499 aa13.89□□□□□ -0.19
SMC1A-204ENST00000463684 KRTAP21-3Q3LHN1 58 aa13.89□□□□□ -0.19
SMC1A-204ENST00000463684 ZNF658BQ4V348 819 aaPredicted RBP13.89□□□□□ -0.19
SMC1A-204ENST00000463684 KAZNQ674X7 775 aa13.89□□□□□ -0.19
SMC1A-204ENST00000463684 XKRXQ6PP77 449 aa13.89□□□□□ -0.19
SMC1A-204ENST00000463684 MFSD7Q6UXD7 560 aa13.89□□□□□ -0.19
SMC1A-204ENST00000463684 FLVCR1-AS1Q8TAF5 88 aa13.89□□□□□ -0.19
SMC1A-204ENST00000463684 CCDC110Q8TBZ0 833 aa13.89□□□□□ -0.19
SMC1A-204ENST00000463684 IL1RAPL1Q9NZN1 696 aa13.89□□□□□ -0.19
SMC1A-204ENST00000463684 NENFQ9UMX5 172 aa13.89□□□□□ -0.19
SMC1A-204ENST00000463684 F8P00451 2351 aa13.88□□□□□ -0.19
SMC1A-204ENST00000463684 SEC16AO15027 2179 aa13.88□□□□□ -0.19
SMC1A-204ENST00000463684 IGLV3-16A0A075B6K0 115 aa13.88□□□□□ -0.19
SMC1A-204ENST00000463684 LIN7AO14910 233 aaPredicted RBP13.88□□□□□ -0.19
SMC1A-204ENST00000463684 DSCR3O14972 297 aa13.88□□□□□ -0.19
SMC1A-204ENST00000463684 UNC5CO95185 931 aa13.88□□□□□ -0.19
SMC1A-204ENST00000463684 HPP00738 406 aa13.88□□□□□ -0.19
SMC1A-204ENST00000463684 CRYABP02511 175 aaKnown RBP13.88□□□□□ -0.19
SMC1A-204ENST00000463684 SSTR2P30874 369 aa13.88□□□□□ -0.19
SMC1A-204ENST00000463684 CARSP49589 748 aaKnown RBP13.88□□□□□ -0.19
SMC1A-204ENST00000463684 CASP6P55212 293 aa13.88□□□□□ -0.19
SMC1A-204ENST00000463684 RBPJQ06330 500 aa13.88□□□□□ -0.19
SMC1A-204ENST00000463684 Q0VFX4 171 aa13.88□□□□□ -0.19
SMC1A-204ENST00000463684 SLC18A3Q16572 532 aa13.88□□□□□ -0.19
SMC1A-204ENST00000463684 YOD1Q5VVQ6 348 aaPredicted RBP13.88□□□□□ -0.19
SMC1A-204ENST00000463684 RANBP10Q6VN20 620 aa13.88□□□□□ -0.19
SMC1A-204ENST00000463684 TAS2R42Q7RTR8 314 aa13.88□□□□□ -0.19
SMC1A-204ENST00000463684 KBTBD2Q8IY47 623 aa13.88□□□□□ -0.19
SMC1A-204ENST00000463684 TAAR6Q96RI8 345 aa13.88□□□□□ -0.19
SMC1A-204ENST00000463684 TRIM8Q9BZR9 551 aa13.88□□□□□ -0.19
SMC1A-204ENST00000463684 ZNF160Q9HCG1 818 aa13.88□□□□□ -0.19
SMC1A-204ENST00000463684 CUTCQ9NTM9 273 aa13.88□□□□□ -0.19
SMC1A-204ENST00000463684 SEC14L3Q9UDX4 400 aa13.88□□□□□ -0.19
SMC1A-204ENST00000463684 MDC1Q14676 2089 aaKnown RBP13.87□□□□□ -0.19
SMC1A-204ENST00000463684 HACD1B0YJ81 288 aa13.87□□□□□ -0.19
SMC1A-204ENST00000463684 USP1O94782 785 aa13.87□□□□□ -0.19
SMC1A-204ENST00000463684 AP2A2O94973 939 aa13.87□□□□□ -0.19
SMC1A-204ENST00000463684 UQCRHP07919 91 aa13.87□□□□□ -0.19
SMC1A-204ENST00000463684 MYBL2P10244 700 aa13.87□□□□□ -0.19
SMC1A-204ENST00000463684 ACPPP15309 386 aa13.87□□□□□ -0.19
SMC1A-204ENST00000463684 CAPN3P20807 821 aa13.87□□□□□ -0.19
SMC1A-204ENST00000463684 MAGP20916 626 aa13.87□□□□□ -0.19
SMC1A-204ENST00000463684 ACRV1P26436 265 aa13.87□□□□□ -0.19
SMC1A-204ENST00000463684 MC4RP32245 332 aa13.87□□□□□ -0.19
SMC1A-204ENST00000463684 CDKN2BP42772 138 aa13.87□□□□□ -0.19
SMC1A-204ENST00000463684 SLC1A1P43005 524 aa13.87□□□□□ -0.19
SMC1A-204ENST00000463684 CA7P43166 264 aa13.87□□□□□ -0.19
SMC1A-204ENST00000463684 GCGRP47871 477 aa13.87□□□□□ -0.19
SMC1A-204ENST00000463684 TNFSF10P50591 281 aa13.87□□□□□ -0.19
SMC1A-204ENST00000463684 GRM7Q14831 915 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms