RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 CLIC1O00299 241 aa15.5■□□□□ 0.07
SMC4-204ENST00000462787 SORBS2O94875 1100 aaKnown RBP15.5■□□□□ 0.07
SMC4-204ENST00000462787 ADCYAP1R1P41586 468 aa15.5■□□□□ 0.07
SMC4-204ENST00000462787 MAP2K4P45985 399 aa15.5■□□□□ 0.07
SMC4-204ENST00000462787 C1orf220Q5T0J3 134 aa15.5■□□□□ 0.07
SMC4-204ENST00000462787 POLR2J3Q9H1A7 115 aaKnown RBP15.5■□□□□ 0.07
SMC4-204ENST00000462787 TLR4O00206 839 aa15.5■□□□□ 0.07
SMC4-204ENST00000462787 PLD2O14939 933 aa15.5■□□□□ 0.07
SMC4-204ENST00000462787 ALDH1A2O94788 518 aa15.5■□□□□ 0.07
SMC4-204ENST00000462787 GCAP28676 217 aa15.5■□□□□ 0.07
SMC4-204ENST00000462787 NUDT6P53370 316 aa15.5■□□□□ 0.07
SMC4-204ENST00000462787 TAF1AQ15573 450 aaPredicted RBP15.5■□□□□ 0.07
SMC4-204ENST00000462787 Q6ZNX1 250 aa15.5■□□□□ 0.07
SMC4-204ENST00000462787 AMIGO1Q86WK6 493 aa15.5■□□□□ 0.07
SMC4-204ENST00000462787 TRIM48Q8IWZ4 208 aa15.5■□□□□ 0.07
SMC4-204ENST00000462787 PHACTR4Q8IZ21 702 aa15.5■□□□□ 0.07
SMC4-204ENST00000462787 MFSD2AQ8NA29 543 aa15.5■□□□□ 0.07
SMC4-204ENST00000462787 CNIH3Q8TBE1 160 aa15.5■□□□□ 0.07
SMC4-204ENST00000462787 AKAP1Q92667 903 aaKnown RBP eCLIP15.5■□□□□ 0.074e-24■■■■■ 140.6
SMC4-204ENST00000462787 MYO19Q96H55 970 aa15.5■□□□□ 0.07
SMC4-204ENST00000462787 SLC29A1Q99808 456 aa15.5■□□□□ 0.07
SMC4-204ENST00000462787 SMPD4Q9NXE4 827 aa15.5■□□□□ 0.07
SMC4-204ENST00000462787 ANKMY1Q9P2S6 941 aa15.5■□□□□ 0.07
SMC4-204ENST00000462787 PCDHGA7Q9Y5G6 932 aa15.5■□□□□ 0.07
SMC4-204ENST00000462787 SLC1A7O00341 560 aa15.5■□□□□ 0.07
SMC4-204ENST00000462787 AP1G1O43747 822 aa15.5■□□□□ 0.07
SMC4-204ENST00000462787 BCAS1O75363 584 aaPredicted RBP15.5■□□□□ 0.07
SMC4-204ENST00000462787 CDRT1O95170 752 aa15.5■□□□□ 0.07
SMC4-204ENST00000462787 MT-ND2P03891 347 aa15.5■□□□□ 0.07
SMC4-204ENST00000462787 SLC13A2Q13183 592 aa15.5■□□□□ 0.07
SMC4-204ENST00000462787 GPR162Q16538 588 aa15.5■□□□□ 0.07
SMC4-204ENST00000462787 SPAG16Q8N0X2 631 aa15.5■□□□□ 0.07
SMC4-204ENST00000462787 ZNF675Q8TD23 568 aa15.5■□□□□ 0.07
SMC4-204ENST00000462787 CREB3L1Q96BA8 519 aa15.5■□□□□ 0.07
SMC4-204ENST00000462787 SH3YL1Q96HL8 342 aaPredicted RBP15.5■□□□□ 0.07
SMC4-204ENST00000462787 CNTNAP1P78357 1384 aa15.5■□□□□ 0.07
SMC4-204ENST00000462787 PDPK1O15530 556 aa15.5■□□□□ 0.07
SMC4-204ENST00000462787 DFNA5O60443 496 aa15.5■□□□□ 0.07
SMC4-204ENST00000462787 MSCO60682 206 aa15.5■□□□□ 0.07
SMC4-204ENST00000462787 XYLBO75191 536 aa15.5■□□□□ 0.07
SMC4-204ENST00000462787 COQ9O75208 318 aa15.5■□□□□ 0.07
SMC4-204ENST00000462787 OR2B3O76000 313 aa15.5■□□□□ 0.07
SMC4-204ENST00000462787 HDCP19113 662 aa15.5■□□□□ 0.07
SMC4-204ENST00000462787 PFKPQ01813 784 aa15.5■□□□□ 0.07
SMC4-204ENST00000462787 PIGFQ07326 219 aa15.5■□□□□ 0.07
SMC4-204ENST00000462787 ZNF267Q14586 743 aaPredicted RBP15.5■□□□□ 0.07
SMC4-204ENST00000462787 HECTD3Q5T447 861 aa15.5■□□□□ 0.07
SMC4-204ENST00000462787 PGBD2Q6P3X8 592 aa15.5■□□□□ 0.07
SMC4-204ENST00000462787 ZNF613Q6PF04 617 aa15.5■□□□□ 0.07
SMC4-204ENST00000462787 PTF1AQ7RTS3 328 aa15.5■□□□□ 0.07
SMC4-204ENST00000462787 KRT77Q7Z794 578 aa15.5■□□□□ 0.07
SMC4-204ENST00000462787 DUSP26Q9BV47 211 aa15.5■□□□□ 0.07
SMC4-204ENST00000462787 C1QTNF1Q9BXJ1 281 aa15.5■□□□□ 0.07
SMC4-204ENST00000462787 OXCT2Q9BYC2 517 aaPredicted RBP15.5■□□□□ 0.07
SMC4-204ENST00000462787 ZFYVE1Q9HBF4 777 aa15.5■□□□□ 0.07
SMC4-204ENST00000462787 MAP10Q9P2G4 905 aa15.5■□□□□ 0.07
SMC4-204ENST00000462787 ZNF879B4DU55 563 aa15.49■□□□□ 0.07
SMC4-204ENST00000462787 NDUFV1P49821 464 aa15.49■□□□□ 0.07
SMC4-204ENST00000462787 PNLIPRP1P54315 467 aa15.49■□□□□ 0.07
SMC4-204ENST00000462787 SETMARQ53H47 684 aaPredicted RBP15.49■□□□□ 0.07
SMC4-204ENST00000462787 ARMC6Q6NXE6 501 aa15.49■□□□□ 0.07
SMC4-204ENST00000462787 IFNLR1Q8IU57 520 aaPredicted RBP15.49■□□□□ 0.07
SMC4-204ENST00000462787 SLC7A5P1Q8MH63 180 aa15.49■□□□□ 0.07
SMC4-204ENST00000462787 CHPT1Q8WUD6 406 aa15.49■□□□□ 0.07
SMC4-204ENST00000462787 ITM2CQ9NQX7 267 aa15.49■□□□□ 0.07
SMC4-204ENST00000462787 POLR3BQ9NW08 1133 aaPredicted RBP15.49■□□□□ 0.07
SMC4-204ENST00000462787 MAB21L2Q9Y586 359 aa15.49■□□□□ 0.07
SMC4-204ENST00000462787 SNX10Q9Y5X0 201 aa15.49■□□□□ 0.07
SMC4-204ENST00000462787 TSPAN1O60635 241 aa15.49■□□□□ 0.07
SMC4-204ENST00000462787 CLCN4P51793 760 aa15.49■□□□□ 0.07
SMC4-204ENST00000462787 PLA2G16P53816 162 aa15.49■□□□□ 0.07
SMC4-204ENST00000462787 ZDHHC20Q5W0Z9 365 aa15.49■□□□□ 0.07
SMC4-204ENST00000462787 ZNF767PQ75MW2 155 aa15.49■□□□□ 0.07
SMC4-204ENST00000462787 ITIH5Q86UX2 942 aa15.49■□□□□ 0.07
SMC4-204ENST00000462787 HMCESQ96FZ2 354 aa15.49■□□□□ 0.07
SMC4-204ENST00000462787 CORO1BQ9BR76 489 aa15.49■□□□□ 0.07
SMC4-204ENST00000462787 TM6SF2Q9BZW4 377 aa15.49■□□□□ 0.07
SMC4-204ENST00000462787 TIGARQ9NQ88 270 aa15.49■□□□□ 0.07
SMC4-204ENST00000462787 CPQQ9Y646 472 aa15.49■□□□□ 0.07
SMC4-204ENST00000462787 GLYATL1P3A0A0U1RQE8 302 aa15.49■□□□□ 0.07
SMC4-204ENST00000462787 STX16O14662 325 aa15.49■□□□□ 0.07
SMC4-204ENST00000462787 CLDN11O75508 207 aa15.49■□□□□ 0.07
SMC4-204ENST00000462787 APOL3O95236 402 aa15.49■□□□□ 0.07
SMC4-204ENST00000462787 C2orf80Q0P641 193 aa15.49■□□□□ 0.07
SMC4-204ENST00000462787 PGM2L1Q6PCE3 622 aa15.49■□□□□ 0.07
SMC4-204ENST00000462787 TMIEQ8NEW7 156 aa15.49■□□□□ 0.07
SMC4-204ENST00000462787 RTP4Q96DX8 246 aa15.49■□□□□ 0.07
SMC4-204ENST00000462787 TMEM169Q96HH4 297 aa15.49■□□□□ 0.07
SMC4-204ENST00000462787 TTYH2Q9BSA4 534 aa15.49■□□□□ 0.07
SMC4-204ENST00000462787 PRSS51A0A1B0GVH4 220 aa15.49■□□□□ 0.07
SMC4-204ENST00000462787 TM4SF1P30408 202 aa15.49■□□□□ 0.07
SMC4-204ENST00000462787 NKX2-5P52952 324 aaPredicted RBP15.49■□□□□ 0.07
SMC4-204ENST00000462787 GALNT2Q10471 571 aa15.49■□□□□ 0.07
SMC4-204ENST00000462787 HEPACAMQ14CZ8 416 aa15.49■□□□□ 0.07
SMC4-204ENST00000462787 TRAPPC5Q8IUR0 188 aa15.49■□□□□ 0.07
SMC4-204ENST00000462787 TRPM4Q8TD43 1214 aa15.49■□□□□ 0.07
SMC4-204ENST00000462787 SLC35F5Q8WV83 523 aa15.49■□□□□ 0.07
SMC4-204ENST00000462787 JPH3Q8WXH2 748 aaPredicted RBP15.49■□□□□ 0.07
SMC4-204ENST00000462787 KIAA1191Q96A73 305 aa15.49■□□□□ 0.07
SMC4-204ENST00000462787 AKT1S1Q96B36 256 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms