RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 SDCCAG8Q86SQ7 713 aaPredicted RBP9.83□□□□□ -0.84
SF3A3-204ENST00000462258 TAX1BP1Q86VP1 789 aa9.83□□□□□ -0.84
SF3A3-204ENST00000462258 CAND1Q86VP6 1230 aaKnown RBP9.83□□□□□ -0.84
SF3A3-204ENST00000462258 CFAP61Q8NHU2 1237 aa9.83□□□□□ -0.84
SF3A3-204ENST00000462258 FLVCR1-AS1Q8TAF5 88 aa9.83□□□□□ -0.84
SF3A3-204ENST00000462258 SKA2Q8WVK7 121 aaPredicted RBP9.83□□□□□ -0.84
SF3A3-204ENST00000462258 N4BP2L2Q92802 583 aaPredicted RBP9.83□□□□□ -0.84
SF3A3-204ENST00000462258 MR1Q95460 341 aa9.83□□□□□ -0.84
SF3A3-204ENST00000462258 CLIP3Q96DZ5 547 aa9.83□□□□□ -0.84
SF3A3-204ENST00000462258 LRFN5Q96NI6 719 aa9.83□□□□□ -0.84
SF3A3-204ENST00000462258 OR2A14Q96R47 310 aa9.83□□□□□ -0.84
SF3A3-204ENST00000462258 MENTQ9BUN1 341 aa9.83□□□□□ -0.84
SF3A3-204ENST00000462258 FAM117AQ9C073 453 aa9.83□□□□□ -0.84
SF3A3-204ENST00000462258 TWSG1Q9GZX9 223 aa9.83□□□□□ -0.84
SF3A3-204ENST00000462258 SLC25A18Q9H1K4 315 aa9.83□□□□□ -0.84
SF3A3-204ENST00000462258 ACTR5Q9H9F9 607 aaPredicted RBP9.83□□□□□ -0.84
SF3A3-204ENST00000462258 AKIRIN1Q9H9L7 192 aaPredicted RBP9.83□□□□□ -0.84
SF3A3-204ENST00000462258 TRMT1Q9NXH9 659 aaKnown RBP9.83□□□□□ -0.84
SF3A3-204ENST00000462258 IL1RAPL1Q9NZN1 696 aa9.83□□□□□ -0.84
SF3A3-204ENST00000462258 CIDEBQ9UHD4 219 aa9.83□□□□□ -0.84
SF3A3-204ENST00000462258 TUBD1Q9UJT1 453 aa9.83□□□□□ -0.84
SF3A3-204ENST00000462258 POLHQ9Y253 713 aa9.83□□□□□ -0.84
SF3A3-204ENST00000462258 NEU2Q9Y3R4 380 aa9.83□□□□□ -0.84
SF3A3-204ENST00000462258 HEMK1Q9Y5R4 338 aaPredicted RBP9.83□□□□□ -0.84
SF3A3-204ENST00000462258 FAM237BA0A1B0GVD1 139 aa9.82□□□□□ -0.84
SF3A3-204ENST00000462258 ISM1B1AKI9 464 aa9.82□□□□□ -0.84
SF3A3-204ENST00000462258 E7EQ34 232 aa9.82□□□□□ -0.84
SF3A3-204ENST00000462258 H3BMM5 538 aa9.82□□□□□ -0.84
SF3A3-204ENST00000462258 RASGRF2O14827 1237 aa9.82□□□□□ -0.84
SF3A3-204ENST00000462258 KPNA5O15131 536 aa9.82□□□□□ -0.84
SF3A3-204ENST00000462258 ZNF185O15231 689 aa9.82□□□□□ -0.84
SF3A3-204ENST00000462258 NIPSNAP2O75323 286 aa9.82□□□□□ -0.84
SF3A3-204ENST00000462258 CREG1O75629 220 aa9.82□□□□□ -0.84
SF3A3-204ENST00000462258 ESR1P03372 595 aa9.82□□□□□ -0.84
SF3A3-204ENST00000462258 FURINP09958 794 aa9.82□□□□□ -0.84
SF3A3-204ENST00000462258 PTPN4P29074 926 aa9.82□□□□□ -0.84
SF3A3-204ENST00000462258 RORAP35398 523 aa9.82□□□□□ -0.84
SF3A3-204ENST00000462258 BDKRB1P46663 353 aa9.82□□□□□ -0.84
SF3A3-204ENST00000462258 RPS15P62841 145 aaKnown RBP9.82□□□□□ -0.84
SF3A3-204ENST00000462258 NFKB2Q00653 900 aa9.82□□□□□ -0.84
SF3A3-204ENST00000462258 DHX34Q14147 1143 aaKnown RBP9.82□□□□□ -0.84
SF3A3-204ENST00000462258 GRB7Q14451 532 aa9.82□□□□□ -0.84
SF3A3-204ENST00000462258 PPP1R7Q15435 360 aa9.82□□□□□ -0.84
SF3A3-204ENST00000462258 ZIC1Q15915 447 aa9.82□□□□□ -0.84
SF3A3-204ENST00000462258 KYNUQ16719 465 aa9.82□□□□□ -0.84
SF3A3-204ENST00000462258 SLC5A12Q1EHB4 618 aa9.82□□□□□ -0.84
SF3A3-204ENST00000462258 PLEKHS1Q5SXH7 462 aa9.82□□□□□ -0.84
SF3A3-204ENST00000462258 ZNF470Q6ECI4 717 aa9.82□□□□□ -0.84
SF3A3-204ENST00000462258 CNSTQ6PJW8 725 aa9.82□□□□□ -0.84
SF3A3-204ENST00000462258 ZNF517Q6ZMY9 492 aaPredicted RBP9.82□□□□□ -0.84
SF3A3-204ENST00000462258 CILP2Q8IUL8 1156 aa9.82□□□□□ -0.84
SF3A3-204ENST00000462258 SYTL1Q8IYJ3 562 aa9.82□□□□□ -0.84
SF3A3-204ENST00000462258 GPR135Q8IZ08 494 aa9.82□□□□□ -0.84
SF3A3-204ENST00000462258 DSELQ8IZU8 1212 aa9.82□□□□□ -0.84
SF3A3-204ENST00000462258 LINC01555Q8NAE3 123 aa9.82□□□□□ -0.84
SF3A3-204ENST00000462258 SLC38A9Q8NBW4 561 aa9.82□□□□□ -0.84
SF3A3-204ENST00000462258 MCUQ8NE86 351 aa9.82□□□□□ -0.84
SF3A3-204ENST00000462258 APOBEC4Q8WW27 367 aaKnown RBP9.82□□□□□ -0.84
SF3A3-204ENST00000462258 SEC14L1Q92503 715 aa9.82□□□□□ -0.84
SF3A3-204ENST00000462258 ANP32BQ92688 251 aaKnown RBP9.82□□□□□ -0.84
SF3A3-204ENST00000462258 FAM136AQ96C01 138 aa9.82□□□□□ -0.84
SF3A3-204ENST00000462258 TCTN2Q96GX1 697 aa9.82□□□□□ -0.84
SF3A3-204ENST00000462258 BIRC8Q96P09 236 aa9.82□□□□□ -0.84
SF3A3-204ENST00000462258 IL17FQ96PD4 163 aa9.82□□□□□ -0.84
SF3A3-204ENST00000462258 RAB11FIP5Q9BXF6 653 aa9.82□□□□□ -0.84
SF3A3-204ENST00000462258 GPR87Q9BY21 358 aa9.82□□□□□ -0.84
SF3A3-204ENST00000462258 SLC7A5P2Q9GIP4 190 aa9.82□□□□□ -0.84
SF3A3-204ENST00000462258 CHST8Q9H2A9 424 aa9.82□□□□□ -0.84
SF3A3-204ENST00000462258 PCMTD2Q9NV79 361 aa9.82□□□□□ -0.84
SF3A3-204ENST00000462258 TSR3Q9UJK0 312 aaKnown RBP9.82□□□□□ -0.84
SF3A3-204ENST00000462258 RUVBL2Q9Y230 463 aaKnown RBP9.82□□□□□ -0.84
SF3A3-204ENST00000462258 VPS9D1Q9Y2B5 631 aa9.82□□□□□ -0.84
SF3A3-204ENST00000462258 MAN2B2Q9Y2E5 1009 aa9.82□□□□□ -0.84
SF3A3-204ENST00000462258 TENM4Q6N022 2769 aa9.82□□□□□ -0.84
SF3A3-204ENST00000462258 NUP210LQ5VU65 1888 aa9.81□□□□□ -0.84
SF3A3-204ENST00000462258 SDR42E2A6NKP2 422 aa9.81□□□□□ -0.84
SF3A3-204ENST00000462258 USP27XA6NNY8 438 aa9.81□□□□□ -0.84
SF3A3-204ENST00000462258 E5RI56 91 aa9.81□□□□□ -0.84
SF3A3-204ENST00000462258 J3QKU1 62 aa9.81□□□□□ -0.84
SF3A3-204ENST00000462258 MEN1O00255 615 aa9.81□□□□□ -0.84
SF3A3-204ENST00000462258 KLK3P07288 261 aaPredicted RBP9.81□□□□□ -0.84
SF3A3-204ENST00000462258 TCP1P17987 556 aaKnown RBP9.81□□□□□ -0.84
SF3A3-204ENST00000462258 MAGP20916 626 aa9.81□□□□□ -0.84
SF3A3-204ENST00000462258 CD9P21926 228 aa9.81□□□□□ -0.84
SF3A3-204ENST00000462258 ATP5DP30049 168 aa9.81□□□□□ -0.84
SF3A3-204ENST00000462258 FMO4P31512 558 aa9.81□□□□□ -0.84
SF3A3-204ENST00000462258 MAGEA3P43357 314 aa9.81□□□□□ -0.84
SF3A3-204ENST00000462258 ADARP55265 1226 aaKnown RBP9.81□□□□□ -0.84
SF3A3-204ENST00000462258 IL10RAQ13651 578 aa9.81□□□□□ -0.84
SF3A3-204ENST00000462258 PTCHD3Q3KNS1 767 aa9.81□□□□□ -0.84
SF3A3-204ENST00000462258 ANKRD20A4Q4UJ75 823 aa9.81□□□□□ -0.84
SF3A3-204ENST00000462258 IZUMO3Q5VZ72 239 aa9.81□□□□□ -0.84
SF3A3-204ENST00000462258 NEPROQ6NW34 567 aa9.81□□□□□ -0.84
SF3A3-204ENST00000462258 TTC23LQ6PF05 361 aa9.81□□□□□ -0.84
SF3A3-204ENST00000462258 FAM198BQ6UWH4 519 aa9.81□□□□□ -0.84
SF3A3-204ENST00000462258 CENPUQ71F23 418 aa9.81□□□□□ -0.84
SF3A3-204ENST00000462258 SYVN1Q86TM6 617 aa9.81□□□□□ -0.84
SF3A3-204ENST00000462258 TMEM135Q86UB9 458 aa9.81□□□□□ -0.84
SF3A3-204ENST00000462258 PPIL6Q8IXY8 311 aa9.81□□□□□ -0.84
SF3A3-204ENST00000462258 RAB42Q8N4Z0 105 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms