RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 CIDEBQ9UHD4 219 aa14.9□□□□□ -0.02
VARS-219ENST00000461328 PADI1Q9ULC6 663 aa14.9□□□□□ -0.02
VARS-219ENST00000461328 CDYLQ9Y232 598 aa14.9□□□□□ -0.02
VARS-219ENST00000461328 SMG1Q96Q15 3661 aaKnown RBP14.89□□□□□ -0.03
VARS-219ENST00000461328 EFCAB8A8MWE9 144 aa14.89□□□□□ -0.03
VARS-219ENST00000461328 KATNA1O75449 491 aa14.89□□□□□ -0.03
VARS-219ENST00000461328 SLCO2B1O94956 709 aa14.89□□□□□ -0.03
VARS-219ENST00000461328 TTC4O95801 387 aa14.89□□□□□ -0.03
VARS-219ENST00000461328 CHRM5P08912 532 aaPredicted RBP14.89□□□□□ -0.03
VARS-219ENST00000461328 PKMP14618 531 aaKnown RBP14.89□□□□□ -0.03
VARS-219ENST00000461328 TCN2P20062 427 aa14.89□□□□□ -0.03
VARS-219ENST00000461328 PRDX3P30048 256 aaKnown RBP14.89□□□□□ -0.03
VARS-219ENST00000461328 SLC1A2P43004 574 aa14.89□□□□□ -0.03
VARS-219ENST00000461328 CCR10P46092 362 aa14.89□□□□□ -0.03
VARS-219ENST00000461328 ITGA8P53708 1063 aa14.89□□□□□ -0.03
VARS-219ENST00000461328 ETF1P62495 437 aaKnown RBP14.89□□□□□ -0.03
VARS-219ENST00000461328 TUBB4BP68371 445 aa14.89□□□□□ -0.03
VARS-219ENST00000461328 NFATC3Q12968 1075 aa14.89□□□□□ -0.03
VARS-219ENST00000461328 CTBP1Q13363 440 aa14.89□□□□□ -0.03
VARS-219ENST00000461328 TUBB2AQ13885 445 aa14.89□□□□□ -0.03
VARS-219ENST00000461328 CRYMQ14894 314 aa14.89□□□□□ -0.03
VARS-219ENST00000461328 PLEKHS1Q5SXH7 462 aa14.89□□□□□ -0.03
VARS-219ENST00000461328 C16orf46Q6P387 395 aa14.89□□□□□ -0.03
VARS-219ENST00000461328 CNSTQ6PJW8 725 aa14.89□□□□□ -0.03
VARS-219ENST00000461328 SPESP1Q6UW49 350 aa14.89□□□□□ -0.03
VARS-219ENST00000461328 SYT10Q6XYQ8 523 aa14.89□□□□□ -0.03
VARS-219ENST00000461328 UNC5AQ6ZN44 842 aa14.89□□□□□ -0.03
VARS-219ENST00000461328 TRIM73Q86UV7 250 aa14.89□□□□□ -0.03
VARS-219ENST00000461328 TMEM126BQ8IUX1 230 aa14.89□□□□□ -0.03
VARS-219ENST00000461328 ADGRF3Q8IZF5 1079 aa14.89□□□□□ -0.03
VARS-219ENST00000461328 RAB42Q8N4Z0 105 aa14.89□□□□□ -0.03
VARS-219ENST00000461328 CFAP36Q96G28 342 aa14.89□□□□□ -0.03
VARS-219ENST00000461328 SNF8Q96H20 258 aa14.89□□□□□ -0.03
VARS-219ENST00000461328 BIRC8Q96P09 236 aa14.89□□□□□ -0.03
VARS-219ENST00000461328 NAT9Q9BTE0 207 aa14.89□□□□□ -0.03
VARS-219ENST00000461328 TUBB2BQ9BVA1 445 aa14.89□□□□□ -0.03
VARS-219ENST00000461328 IARS2Q9NSE4 1012 aaKnown RBP14.89□□□□□ -0.03
VARS-219ENST00000461328 OR6C2Q9NZP2 312 aa14.89□□□□□ -0.03
VARS-219ENST00000461328 SLC39A10Q9ULF5 831 aa14.89□□□□□ -0.03
VARS-219ENST00000461328 RUVBL2Q9Y230 463 aaKnown RBP14.89□□□□□ -0.03
VARS-219ENST00000461328 BTRCQ9Y297 605 aa14.89□□□□□ -0.03
VARS-219ENST00000461328 MRPS18BQ9Y676 258 aaKnown RBP14.89□□□□□ -0.03
VARS-219ENST00000461328 BAHCC1Q9P281 2608 aa14.88□□□□□ -0.03
VARS-219ENST00000461328 PIEZO2Q9H5I5 2752 aa14.88□□□□□ -0.03
VARS-219ENST00000461328 ISM1B1AKI9 464 aa14.88□□□□□ -0.03
VARS-219ENST00000461328 B8ZZF3 427 aa14.88□□□□□ -0.03
VARS-219ENST00000461328 SMAPO00193 183 aa14.88□□□□□ -0.03
VARS-219ENST00000461328 SCRG1O75711 98 aa14.88□□□□□ -0.03
VARS-219ENST00000461328 NTRK1P04629 796 aa14.88□□□□□ -0.03
VARS-219ENST00000461328 PLA2G2AP14555 144 aa14.88□□□□□ -0.03
VARS-219ENST00000461328 PVRP15151 417 aa14.88□□□□□ -0.03
VARS-219ENST00000461328 ST6GAL1P15907 406 aa14.88□□□□□ -0.03
VARS-219ENST00000461328 UGT2B7P16662 529 aa14.88□□□□□ -0.03
VARS-219ENST00000461328 F8A1P23610 371 aa14.88□□□□□ -0.03
VARS-219ENST00000461328 PKLRP30613 574 aa14.88□□□□□ -0.03
VARS-219ENST00000461328 BDKRB1P46663 353 aa14.88□□□□□ -0.03
VARS-219ENST00000461328 RAB28P51157 221 aa14.88□□□□□ -0.03
VARS-219ENST00000461328 ADARP55265 1226 aaKnown RBP14.88□□□□□ -0.03
VARS-219ENST00000461328 ARL4CP56559 192 aa14.88□□□□□ -0.03
VARS-219ENST00000461328 MPP1Q00013 466 aa14.88□□□□□ -0.03
VARS-219ENST00000461328 HIF1AQ16665 826 aa14.88□□□□□ -0.03
VARS-219ENST00000461328 TTLL9Q3SXZ7 439 aa14.88□□□□□ -0.03
VARS-219ENST00000461328 HSP90AA5PQ58FG0 334 aa14.88□□□□□ -0.03
VARS-219ENST00000461328 ZNF789Q5FWF6 425 aa14.88□□□□□ -0.03
VARS-219ENST00000461328 SPANXN3Q5MJ09 141 aa14.88□□□□□ -0.03
VARS-219ENST00000461328 HP1BP3Q5SSJ5 553 aaPredicted RBP14.88□□□□□ -0.03
VARS-219ENST00000461328 TAX1BP1Q86VP1 789 aa14.88□□□□□ -0.03
VARS-219ENST00000461328 LMNTD2Q8IXW0 634 aa14.88□□□□□ -0.03
VARS-219ENST00000461328 ZBTB2Q8N680 514 aa14.88□□□□□ -0.03
VARS-219ENST00000461328 OR8K5Q8NH50 307 aa14.88□□□□□ -0.03
VARS-219ENST00000461328 N4BP2L2Q92802 583 aaPredicted RBP14.88□□□□□ -0.03
VARS-219ENST00000461328 EBNA1BP2Q99848 306 aaKnown RBP14.88□□□□□ -0.03
VARS-219ENST00000461328 PPANQ9NQ55 473 aaKnown RBP14.88□□□□□ -0.03
VARS-219ENST00000461328 LHX9Q9NQ69 397 aa14.88□□□□□ -0.03
VARS-219ENST00000461328 KCND3Q9UK17 655 aa14.88□□□□□ -0.03
VARS-219ENST00000461328 FBXO5Q9UKT4 447 aa14.88□□□□□ -0.03
VARS-219ENST00000461328 CHMP2BQ9UQN3 213 aa14.88□□□□□ -0.03
VARS-219ENST00000461328 PCDHB3Q9Y5E6 796 aa14.88□□□□□ -0.03
VARS-219ENST00000461328 MRFAP1Q9Y605 127 aa14.88□□□□□ -0.03
VARS-219ENST00000461328 FAM169AQ9Y6X4 670 aa14.88□□□□□ -0.03
VARS-219ENST00000461328 CFAP46Q8IYW2 2715 aa14.87□□□□□ -0.03
VARS-219ENST00000461328 TMEM150CB9EJG8 249 aa14.87□□□□□ -0.03
VARS-219ENST00000461328 NDC80O14777 642 aa14.87□□□□□ -0.03
VARS-219ENST00000461328 CPNE3O75131 537 aaKnown RBP14.87□□□□□ -0.03
VARS-219ENST00000461328 SEC31AO94979 1220 aaKnown RBP14.87□□□□□ -0.03
VARS-219ENST00000461328 S1PR4O95977 384 aa14.87□□□□□ -0.03
VARS-219ENST00000461328 ERVK-10P10266 1014 aa14.87□□□□□ -0.03
VARS-219ENST00000461328 IVDP26440 423 aa14.87□□□□□ -0.03
VARS-219ENST00000461328 OAS2P29728 719 aaKnown RBP14.87□□□□□ -0.03
VARS-219ENST00000461328 POLE2P56282 527 aa14.87□□□□□ -0.03
VARS-219ENST00000461328 C2orf54Q08AI8 447 aa14.87□□□□□ -0.03
VARS-219ENST00000461328 DNASE1L3Q13609 305 aa14.87□□□□□ -0.03
VARS-219ENST00000461328 DEFB109BQ30KR1 87 aa14.87□□□□□ -0.03
VARS-219ENST00000461328 MSS51Q4VC12 460 aa14.87□□□□□ -0.03
VARS-219ENST00000461328 C2orf73Q8N5S3 287 aaPredicted RBP14.87□□□□□ -0.03
VARS-219ENST00000461328 C19orf47Q8N9M1 422 aaKnown RBP14.87□□□□□ -0.03
VARS-219ENST00000461328 CT55Q8WUE5 264 aa14.87□□□□□ -0.03
VARS-219ENST00000461328 ZNF501Q96CX3 271 aaPredicted RBP14.87□□□□□ -0.03
VARS-219ENST00000461328 IL17FQ96PD4 163 aa14.87□□□□□ -0.03
VARS-219ENST00000461328 RAB11FIP5Q9BXF6 653 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms