RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 FASTKD1Q53R41 847 aaKnown RBP13.25□□□□□ -0.29
SCAMP4-206ENST00000460767 AARS2Q5JTZ9 985 aaKnown RBP13.25□□□□□ -0.29
SCAMP4-206ENST00000460767 CPZQ66K79 652 aa13.25□□□□□ -0.29
SCAMP4-206ENST00000460767 CES3Q6UWW8 571 aa13.25□□□□□ -0.29
SCAMP4-206ENST00000460767 ZNF517Q6ZMY9 492 aaPredicted RBP13.25□□□□□ -0.29
SCAMP4-206ENST00000460767 CENPUQ71F23 418 aa13.25□□□□□ -0.29
SCAMP4-206ENST00000460767 TAS2R42Q7RTR8 314 aa13.25□□□□□ -0.29
SCAMP4-206ENST00000460767 PCGF5Q86SE9 256 aa13.25□□□□□ -0.29
SCAMP4-206ENST00000460767 LDB1Q86U70 411 aaPredicted RBP13.25□□□□□ -0.29
SCAMP4-206ENST00000460767 BPHLQ86WA6 291 aaPredicted RBP13.25□□□□□ -0.29
SCAMP4-206ENST00000460767 CILP2Q8IUL8 1156 aa13.25□□□□□ -0.29
SCAMP4-206ENST00000460767 OR6P1Q8NGX9 317 aa13.25□□□□□ -0.29
SCAMP4-206ENST00000460767 LKAAEAR1Q8TD35 194 aa13.25□□□□□ -0.29
SCAMP4-206ENST00000460767 LPGAT1Q92604 370 aa13.25□□□□□ -0.29
SCAMP4-206ENST00000460767 TCF12Q99081 682 aa13.25□□□□□ -0.29
SCAMP4-206ENST00000460767 CARD6Q9BX69 1037 aa13.25□□□□□ -0.29
SCAMP4-206ENST00000460767 ACSS2Q9NR19 701 aa13.25□□□□□ -0.29
SCAMP4-206ENST00000460767 LNPEPQ9UIQ6 1025 aa13.25□□□□□ -0.29
SCAMP4-206ENST00000460767 BHMG1C9JSJ3 638 aaPredicted RBP13.24□□□□□ -0.29
SCAMP4-206ENST00000460767 GOLGA8MH3BSY2 632 aa13.24□□□□□ -0.29
SCAMP4-206ENST00000460767 PRMT5O14744 637 aaPredicted RBP13.24□□□□□ -0.29
SCAMP4-206ENST00000460767 LIN7AO14910 233 aaPredicted RBP13.24□□□□□ -0.29
SCAMP4-206ENST00000460767 UBXN7O94888 489 aa13.24□□□□□ -0.29
SCAMP4-206ENST00000460767 VAPBO95292 243 aa13.24□□□□□ -0.29
SCAMP4-206ENST00000460767 OGNP20774 298 aaKnown RBP13.24□□□□□ -0.29
SCAMP4-206ENST00000460767 CASQ1P31415 396 aa13.24□□□□□ -0.29
SCAMP4-206ENST00000460767 PAFAH1B1P43034 410 aa13.24□□□□□ -0.29
SCAMP4-206ENST00000460767 MAPK9P45984 424 aa13.24□□□□□ -0.29
SCAMP4-206ENST00000460767 CAPZBP47756 277 aa13.24□□□□□ -0.29
SCAMP4-206ENST00000460767 PRR30Q53SZ7 412 aaPredicted RBP13.24□□□□□ -0.29
SCAMP4-206ENST00000460767 SLC6A19Q695T7 634 aa13.24□□□□□ -0.29
SCAMP4-206ENST00000460767 IGDCC3Q8IVU1 814 aa13.24□□□□□ -0.29
SCAMP4-206ENST00000460767 KLHL7Q8IXQ5 586 aa13.24□□□□□ -0.29
SCAMP4-206ENST00000460767 CFAP206Q8IYR0 622 aa13.24□□□□□ -0.29
SCAMP4-206ENST00000460767 PRR7Q8TB68 274 aa13.24□□□□□ -0.29
SCAMP4-206ENST00000460767 ADAMTS17Q8TE56 1095 aa13.24□□□□□ -0.29
SCAMP4-206ENST00000460767 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.24□□□□□ -0.29
SCAMP4-206ENST00000460767 C5orf34Q96MH7 638 aa13.24□□□□□ -0.29
SCAMP4-206ENST00000460767 PHF12Q96QT6 1004 aa13.24□□□□□ -0.29
SCAMP4-206ENST00000460767 TRIM51Q9BSJ1 452 aa13.24□□□□□ -0.29
SCAMP4-206ENST00000460767 WWP1Q9H0M0 922 aa13.24□□□□□ -0.29
SCAMP4-206ENST00000460767 ING2Q9H160 280 aa13.24□□□□□ -0.29
SCAMP4-206ENST00000460767 VPS37BQ9H9H4 285 aa13.24□□□□□ -0.29
SCAMP4-206ENST00000460767 ASIC3Q9UHC3 531 aa13.24□□□□□ -0.29
SCAMP4-206ENST00000460767 PSMD13Q9UNM6 376 aa13.24□□□□□ -0.29
SCAMP4-206ENST00000460767 MED16Q9Y2X0 877 aa13.24□□□□□ -0.29
SCAMP4-206ENST00000460767 TEX264Q9Y6I9 313 aa13.24□□□□□ -0.29
SCAMP4-206ENST00000460767 FAM169AQ9Y6X4 670 aa13.24□□□□□ -0.29
SCAMP4-206ENST00000460767 RP1L1Q8IWN7 2480 aaPredicted RBP13.23□□□□□ -0.29
SCAMP4-206ENST00000460767 SLCO2B1O94956 709 aa13.23□□□□□ -0.29
SCAMP4-206ENST00000460767 CBX6O95503 412 aa13.23□□□□□ -0.29
SCAMP4-206ENST00000460767 VIPP01282 170 aa13.23□□□□□ -0.29
SCAMP4-206ENST00000460767 NELFEP18615 380 aaKnown RBP13.23□□□□□ -0.29
SCAMP4-206ENST00000460767 PBLDP30039 288 aaPredicted RBP13.23□□□□□ -0.29
SCAMP4-206ENST00000460767 CCR7P32248 378 aa13.23□□□□□ -0.29
SCAMP4-206ENST00000460767 HALP42357 657 aa13.23□□□□□ -0.29
SCAMP4-206ENST00000460767 RPL21P46778 160 aaKnown RBP13.23□□□□□ -0.29
SCAMP4-206ENST00000460767 TERF1P54274 439 aa13.23□□□□□ -0.29
SCAMP4-206ENST00000460767 BOP1Q14137 746 aaKnown RBP13.23□□□□□ -0.29
SCAMP4-206ENST00000460767 FRG1Q14331 258 aaKnown RBP13.23□□□□□ -0.29
SCAMP4-206ENST00000460767 CTSL3PQ5NE16 218 aa13.23□□□□□ -0.29
SCAMP4-206ENST00000460767 IZUMO3Q5VZ72 239 aa13.23□□□□□ -0.29
SCAMP4-206ENST00000460767 DUPD1Q68J44 220 aa13.23□□□□□ -0.29
SCAMP4-206ENST00000460767 LRRC6Q86X45 466 aa13.23□□□□□ -0.29
SCAMP4-206ENST00000460767 CNTN4Q8IWV2 1026 aa13.23□□□□□ -0.29
SCAMP4-206ENST00000460767 RSC1A1Q92681 617 aa13.23□□□□□ -0.29
SCAMP4-206ENST00000460767 MOCOSQ96EN8 888 aa13.23□□□□□ -0.29
SCAMP4-206ENST00000460767 SLC41A2Q96JW4 573 aa13.23□□□□□ -0.29
SCAMP4-206ENST00000460767 KRT12Q99456 494 aa13.23□□□□□ -0.29
SCAMP4-206ENST00000460767 KIR3DX1Q9H7L2 352 aa13.23□□□□□ -0.29
SCAMP4-206ENST00000460767 PDE7BQ9NP56 450 aa13.23□□□□□ -0.29
SCAMP4-206ENST00000460767 SLAMF7Q9NQ25 335 aa13.23□□□□□ -0.29
SCAMP4-206ENST00000460767 LATS2Q9NRM7 1088 aa13.23□□□□□ -0.29
SCAMP4-206ENST00000460767 SLC24A2Q9UI40 661 aa13.23□□□□□ -0.29
SCAMP4-206ENST00000460767 CDC23Q9UJX2 597 aa13.23□□□□□ -0.29
SCAMP4-206ENST00000460767 G3BP2Q9UN86 482 aaKnown RBP13.23□□□□□ -0.29
SCAMP4-206ENST00000460767 FAM187AA6NFU0 413 aa13.22□□□□□ -0.29
SCAMP4-206ENST00000460767 GOLGA8KD6RF30 607 aa13.22□□□□□ -0.29
SCAMP4-206ENST00000460767 GOLGA8TH3BQL2 631 aa13.22□□□□□ -0.29
SCAMP4-206ENST00000460767 RAD51CO43502 376 aa13.22□□□□□ -0.29
SCAMP4-206ENST00000460767 TIAF1O95411 115 aa13.22□□□□□ -0.29
SCAMP4-206ENST00000460767 S1PR4O95977 384 aa13.22□□□□□ -0.29
SCAMP4-206ENST00000460767 FTH1P02794 183 aa13.22□□□□□ -0.29
SCAMP4-206ENST00000460767 OR56A5P0C7T3 313 aa13.22□□□□□ -0.29
SCAMP4-206ENST00000460767 TPBGLP0DKB5 382 aa13.22□□□□□ -0.29
SCAMP4-206ENST00000460767 AOAHP28039 575 aa13.22□□□□□ -0.29
SCAMP4-206ENST00000460767 PPARGP37231 505 aaPredicted RBP13.22□□□□□ -0.29
SCAMP4-206ENST00000460767 PREPP48147 710 aa13.22□□□□□ -0.29
SCAMP4-206ENST00000460767 PLOD1Q02809 727 aaPredicted RBP13.22□□□□□ -0.29
SCAMP4-206ENST00000460767 DHX9Q08211 1270 aaKnown RBP13.22□□□□□ -0.29
SCAMP4-206ENST00000460767 IL10RAQ13651 578 aa13.22□□□□□ -0.29
SCAMP4-206ENST00000460767 CRYMQ14894 314 aa13.22□□□□□ -0.29
SCAMP4-206ENST00000460767 ZNF789Q5FWF6 425 aa13.22□□□□□ -0.29
SCAMP4-206ENST00000460767 RNF187Q5TA31 235 aaPredicted RBP13.22□□□□□ -0.29
SCAMP4-206ENST00000460767 STEAP4Q687X5 459 aa13.22□□□□□ -0.29
SCAMP4-206ENST00000460767 NEPROQ6NW34 567 aa13.22□□□□□ -0.29
SCAMP4-206ENST00000460767 DUS1LQ6P1R4 473 aaKnown RBP13.22□□□□□ -0.29
SCAMP4-206ENST00000460767 SLC22A15Q8IZD6 547 aa13.22□□□□□ -0.29
SCAMP4-206ENST00000460767 RBMXL3Q8N7X1 1067 aaKnown RBP13.22□□□□□ -0.29
SCAMP4-206ENST00000460767 UBXN4Q92575 508 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms