RNA–Protein interactions for RNA: ENST00000460333.5

VPS13D-202, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 4,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-202ENST00000460333 OTCP00480 354 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 C9P02748 559 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 ZNF806P0C7X5 589 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 RPL3P39023 403 aaKnown RBP6.08□□□□□ -1.44
VPS13D-202ENST00000460333 ALDH9A1P49189 494 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 AFF1P51825 1210 aaKnown RBP6.08□□□□□ -1.44
VPS13D-202ENST00000460333 ATP6AP1Q15904 470 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 WSCD2Q2TBF2 565 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 PNCKQ6P2M8 343 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 METTL3Q86U44 580 aaKnown RBP6.08□□□□□ -1.44
VPS13D-202ENST00000460333 LRRTM3Q86VH5 581 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 TMEM209Q96SK2 561 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 AIFM2Q9BRQ8 373 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 ADGRE3Q9BY15 652 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 GPR63Q9BZJ6 419 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 SLC25A51Q9H1U9 297 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 MAGEH1Q9H213 219 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 RANBP3Q9H6Z4 567 aaPredicted RBP6.08□□□□□ -1.44
VPS13D-202ENST00000460333 SCUBE2Q9NQ36 999 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 QPCTLQ9NXS2 382 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 NPAP1Q9NZP6 1156 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 FBXO5Q9UKT4 447 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 OGDHLQ9ULD0 1010 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 ANGPT4Q9Y264 503 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 MAB21L2Q9Y586 359 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 TCRBV7S3A2A0A539 114 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 TMEM221A6NGB7 291 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.08□□□□□ -1.44
VPS13D-202ENST00000460333 BTN3A1O00481 513 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 SUV39H1O43463 412 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 INMTO95050 263 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 ACRP10323 421 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 IFI30P13284 250 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 CYP4B1P13584 511 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 ITGALP20701 1170 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 TACR2P21452 398 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 ARL4DP49703 201 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 IL2P60568 153 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 CRADDP78560 199 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 NRG1Q02297 640 aaPredicted RBP6.08□□□□□ -1.44
VPS13D-202ENST00000460333 IL10RBQ08334 325 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 USP39Q53GS9 565 aaKnown RBP6.08□□□□□ -1.44
VPS13D-202ENST00000460333 FGD3Q5JSP0 725 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 RETSATQ6NUM9 610 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 DNAJC14Q6Y2X3 702 aaPredicted RBP6.08□□□□□ -1.44
VPS13D-202ENST00000460333 BTN2A1Q7KYR7 527 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 DNAJB7Q7Z6W7 309 aaPredicted RBP6.08□□□□□ -1.44
VPS13D-202ENST00000460333 TSPEARQ8WU66 669 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 TWIST2Q8WVJ9 160 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 PIH1D2Q8WWB5 315 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 CASD1Q96PB1 797 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 YIPF2Q9BWQ6 316 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 TPK1Q9H3S4 243 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 ATP13A1Q9HD20 1204 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 WDR6Q9NNW5 1121 aaKnown RBP6.08□□□□□ -1.44
VPS13D-202ENST00000460333 KLHL1Q9NR64 748 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 CATSPERZQ9NTU4 200 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 TMLHEQ9NVH6 421 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 KLHL28Q9NXS3 571 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 PTGFRNQ9P2B2 879 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 CRLS1Q9UJA2 301 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 MFHAS1Q9Y4C4 1052 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 FADS2P1A8MWK0 482 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 H3BMQ9 156 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 SOD2P04179 222 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 PRKACAP17612 351 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 CDH4P55283 916 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 RPS7P62081 194 aaKnown RBP6.07□□□□□ -1.44
VPS13D-202ENST00000460333 CYP4F2P78329 520 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 CYP4F3Q08477 520 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 SIM2Q14190 667 aaPredicted RBP6.07□□□□□ -1.44
VPS13D-202ENST00000460333 BTBD16Q32M84 506 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 VPS26BQ4G0F5 336 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 RAB6CQ53S08 254 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 KIAA0319Q5VV43 1072 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 CHSY3Q70JA7 882 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 RBM23Q86U06 439 aaKnown RBP6.07□□□□□ -1.44
VPS13D-202ENST00000460333 UXS1Q8NBZ7 420 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 HJURPQ8NCD3 748 aaPredicted RBP6.07□□□□□ -1.44
VPS13D-202ENST00000460333 FAM156AQ8NDB6 213 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 SIMC1Q8NDZ2 872 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 ZNF431Q8TF32 576 aaPredicted RBP6.07□□□□□ -1.44
VPS13D-202ENST00000460333 REPS1Q96D71 796 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 IGSF21Q96ID5 467 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 CNDP2Q96KP4 475 aaKnown RBP6.07□□□□□ -1.44
VPS13D-202ENST00000460333 COG8Q96MW5 612 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 AGAP2Q99490 1192 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 OMDQ99983 421 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 GSDMCQ9BYG8 508 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 GPR62Q9BZJ7 368 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 RAB6CQ9H0N0 254 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 PCDHAC1Q9H158 963 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 CCM2LQ9NUG4 571 aaPredicted RBP6.07□□□□□ -1.44
VPS13D-202ENST00000460333 MTMR10Q9NXD2 777 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 OPTCQ9UBM4 332 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 UBQLN2Q9UHD9 624 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 GLS2Q9UI32 602 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 SNX6Q9UNH7 406 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 FAM234BA2RU67 622 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 TNFRSF10AO00220 468 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms