RNA–Protein interactions for RNA: ENST00000460158.1

VPS8-215, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 366 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-215ENST00000460158 SLC44A1Q8WWI5 657 aa3.26□□□□□ -1.89
VPS8-215ENST00000460158 PRPF31Q8WWY3 499 aaKnown RBP3.26□□□□□ -1.89
VPS8-215ENST00000460158 ABTB1Q969K4 478 aaPredicted RBP3.26□□□□□ -1.89
VPS8-215ENST00000460158 SLC22A18Q96BI1 424 aa3.26□□□□□ -1.89
VPS8-215ENST00000460158 CEP295NLQ96MC4 621 aa3.26□□□□□ -1.89
VPS8-215ENST00000460158 ZNF385AQ96PM9 386 aaKnown RBP3.26□□□□□ -1.89
VPS8-215ENST00000460158 ABHD1Q96SE0 405 aa3.26□□□□□ -1.89
VPS8-215ENST00000460158 RUFY1Q96T51 708 aa3.26□□□□□ -1.89
VPS8-215ENST00000460158 PKP4Q99569 1192 aa3.26□□□□□ -1.89
VPS8-215ENST00000460158 MEIS3Q99687 375 aa3.26□□□□□ -1.89
VPS8-215ENST00000460158 LZTS2Q9BRK4 669 aa3.26□□□□□ -1.89
VPS8-215ENST00000460158 TBCDQ9BTW9 1192 aa3.26□□□□□ -1.89
VPS8-215ENST00000460158 ACPTQ9BZG2 426 aa3.26□□□□□ -1.89
VPS8-215ENST00000460158 LRRCC1Q9C099 1032 aa3.26□□□□□ -1.89
VPS8-215ENST00000460158 HSD3B7Q9H2F3 369 aa3.26□□□□□ -1.89
VPS8-215ENST00000460158 C6orf106Q9H6K1 298 aaPredicted RBP3.26□□□□□ -1.89
VPS8-215ENST00000460158 LRRC4Q9HBW1 653 aa3.26□□□□□ -1.89
VPS8-215ENST00000460158 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.26□□□□□ -1.89
VPS8-215ENST00000460158 ABCB8Q9NUT2 735 aa3.26□□□□□ -1.89
VPS8-215ENST00000460158 TMEM30AQ9NV96 361 aa3.26□□□□□ -1.89
VPS8-215ENST00000460158 ATAD3AQ9NVI7 634 aa3.26□□□□□ -1.89
VPS8-215ENST00000460158 SEC63Q9UGP8 760 aaKnown RBP3.26□□□□□ -1.89
VPS8-215ENST00000460158 FAM153AQ9UHL3 310 aa3.26□□□□□ -1.89
VPS8-215ENST00000460158 PADI1Q9ULC6 663 aa3.26□□□□□ -1.89
VPS8-215ENST00000460158 AKNAQ7Z591 1439 aa3.26□□□□□ -1.89
VPS8-215ENST00000460158 NSD2O96028 1365 aa3.25□□□□□ -1.89
VPS8-215ENST00000460158 PTPRCP08575 1304 aa3.25□□□□□ -1.89
VPS8-215ENST00000460158 IGSF1Q8N6C5 1336 aa3.25□□□□□ -1.89
VPS8-215ENST00000460158 MAGEA13PA6NCF6 341 aa3.25□□□□□ -1.89
VPS8-215ENST00000460158 KIF2AO00139 706 aaPredicted RBP3.25□□□□□ -1.89
VPS8-215ENST00000460158 CTDSP2O14595 271 aa3.25□□□□□ -1.89
VPS8-215ENST00000460158 MAP2K7O14733 419 aa3.25□□□□□ -1.89
VPS8-215ENST00000460158 HS3ST1O14792 307 aa3.25□□□□□ -1.89
VPS8-215ENST00000460158 SMAD9O15198 467 aaKnown RBP3.25□□□□□ -1.89
VPS8-215ENST00000460158 KCNN4O15554 427 aa3.25□□□□□ -1.89
VPS8-215ENST00000460158 GMFGO60234 142 aa3.25□□□□□ -1.89
VPS8-215ENST00000460158 PAHP00439 452 aa3.25□□□□□ -1.89
VPS8-215ENST00000460158 ABCB1P08183 1280 aaPredicted RBP3.25□□□□□ -1.89
VPS8-215ENST00000460158 CCDC172P0C7W6 258 aa3.25□□□□□ -1.89
VPS8-215ENST00000460158 TPBGLP0DKB5 382 aa3.25□□□□□ -1.89
VPS8-215ENST00000460158 SKILP12757 684 aa3.25□□□□□ -1.89
VPS8-215ENST00000460158 SELLP14151 372 aa3.25□□□□□ -1.89
VPS8-215ENST00000460158 PDGFRAP16234 1089 aa3.25□□□□□ -1.89
VPS8-215ENST00000460158 ITGA2P17301 1181 aa3.25□□□□□ -1.89
VPS8-215ENST00000460158 ERCC2P18074 760 aa3.25□□□□□ -1.89
VPS8-215ENST00000460158 TKTP29401 623 aaKnown RBP3.25□□□□□ -1.89
VPS8-215ENST00000460158 CASP3P42574 277 aa3.25□□□□□ -1.89
VPS8-215ENST00000460158 SLC15A1P46059 708 aa3.25□□□□□ -1.89
VPS8-215ENST00000460158 RABIFP47224 123 aa3.25□□□□□ -1.89
VPS8-215ENST00000460158 CAMLGP49069 296 aa3.25□□□□□ -1.89
VPS8-215ENST00000460158 RGS19P49795 217 aa3.25□□□□□ -1.89
VPS8-215ENST00000460158 SUOXP51687 545 aa3.25□□□□□ -1.89
VPS8-215ENST00000460158 BMXP51813 675 aa3.25□□□□□ -1.89
VPS8-215ENST00000460158 GBX2P52951 348 aaPredicted RBP3.25□□□□□ -1.89
VPS8-215ENST00000460158 HAND2P61296 217 aa3.25□□□□□ -1.89
VPS8-215ENST00000460158 ISL1P61371 349 aa3.25□□□□□ -1.89
VPS8-215ENST00000460158 MRPS5P82675 430 aaKnown RBP3.25□□□□□ -1.89
VPS8-215ENST00000460158 TRADDQ15628 312 aa3.25□□□□□ -1.89
VPS8-215ENST00000460158 IZUMO4Q1ZYL8 232 aa3.25□□□□□ -1.89
VPS8-215ENST00000460158 MYLK3Q32MK0 819 aa3.25□□□□□ -1.89
VPS8-215ENST00000460158 C12orf60Q5U649 245 aa3.25□□□□□ -1.89
VPS8-215ENST00000460158 AP1ARQ63HQ0 302 aa3.25□□□□□ -1.89
VPS8-215ENST00000460158 TPGS2Q68CL5 300 aa3.25□□□□□ -1.89
VPS8-215ENST00000460158 SLC25A24Q6NUK1 477 aa3.25□□□□□ -1.89
VPS8-215ENST00000460158 GFRALQ6UXV0 394 aa3.25□□□□□ -1.89
VPS8-215ENST00000460158 TAF8Q7Z7C8 310 aa3.25□□□□□ -1.89
VPS8-215ENST00000460158 CCDC190Q86UF4 302 aa3.25□□□□□ -1.89
VPS8-215ENST00000460158 GPR180Q86V85 440 aa3.25□□□□□ -1.89
VPS8-215ENST00000460158 HOOK3Q86VS8 718 aa3.25□□□□□ -1.89
VPS8-215ENST00000460158 TMEM219Q86XT9 240 aa3.25□□□□□ -1.89
VPS8-215ENST00000460158 SCYL3Q8IZE3 742 aa3.25□□□□□ -1.89
VPS8-215ENST00000460158 MRPL43Q8N983 215 aaKnown RBP3.25□□□□□ -1.89
VPS8-215ENST00000460158 OR52K1Q8NGK4 314 aa3.25□□□□□ -1.89
VPS8-215ENST00000460158 URGCPQ8TCY9 931 aa3.25□□□□□ -1.89
VPS8-215ENST00000460158 AGR3Q8TD06 166 aa3.25□□□□□ -1.89
VPS8-215ENST00000460158 FIG4Q92562 907 aa3.25□□□□□ -1.89
VPS8-215ENST00000460158 MR1Q95460 341 aa3.25□□□□□ -1.89
VPS8-215ENST00000460158 RMDN2Q96LZ7 410 aa3.25□□□□□ -1.89
VPS8-215ENST00000460158 QRFPRQ96P65 431 aa3.25□□□□□ -1.89
VPS8-215ENST00000460158 NUDCD1Q96RS6 583 aa3.25□□□□□ -1.89
VPS8-215ENST00000460158 FERMT1Q9BQL6 677 aa3.25□□□□□ -1.89
VPS8-215ENST00000460158 NAA11Q9BSU3 229 aaPredicted RBP3.25□□□□□ -1.89
VPS8-215ENST00000460158 C1QTNF1Q9BXJ1 281 aa3.25□□□□□ -1.89
VPS8-215ENST00000460158 C1QTNF4Q9BXJ3 329 aa3.25□□□□□ -1.89
VPS8-215ENST00000460158 GCOM2Q9BZD3 368 aaPredicted RBP3.25□□□□□ -1.89
VPS8-215ENST00000460158 NACAP1Q9BZK3 213 aa3.25□□□□□ -1.89
VPS8-215ENST00000460158 TRIM7Q9C029 511 aa3.25□□□□□ -1.89
VPS8-215ENST00000460158 SLC7A5P2Q9GIP4 190 aa3.25□□□□□ -1.89
VPS8-215ENST00000460158 CSTL1Q9H114 145 aa3.25□□□□□ -1.89
VPS8-215ENST00000460158 HRH4Q9H3N8 390 aa3.25□□□□□ -1.89
VPS8-215ENST00000460158 CRLF2Q9HC73 371 aa3.25□□□□□ -1.89
VPS8-215ENST00000460158 TRPV5Q9NQA5 729 aa3.25□□□□□ -1.89
VPS8-215ENST00000460158 GRID1Q9ULK0 1009 aa3.25□□□□□ -1.89
VPS8-215ENST00000460158 VDAC3Q9Y277 283 aa3.25□□□□□ -1.89
VPS8-215ENST00000460158 B3GALT5Q9Y2C3 310 aa3.25□□□□□ -1.89
VPS8-215ENST00000460158 AMDHD2Q9Y303 409 aa3.25□□□□□ -1.89
VPS8-215ENST00000460158 NOSIPQ9Y314 301 aaKnown RBP3.25□□□□□ -1.89
VPS8-215ENST00000460158 PCDHGB1Q9Y5G3 927 aa3.25□□□□□ -1.89
VPS8-215ENST00000460158 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.25□□□□□ -1.89
VPS8-215ENST00000460158 KIAA1217Q5T5P2 1943 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms