RNA–Protein interactions for RNA: ENST00000460112.3

SHROOM4-203, Transcript of shroom family member 4, humanhuman

TSL 5 BASIC

Gene SHROOM4, Length 8,919 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-203ENST00000460112 GDI2P50395 445 aaKnown RBP8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 MPP1Q00013 466 aa8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 FOXM1Q08050 763 aa8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 PLPP4Q5VZY2 271 aa8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 FRMD7Q6ZUT3 714 aa8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 GHDCQ8N2G8 530 aa8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 C16orf58Q96GQ5 468 aa8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 KCTD15Q96SI1 283 aaPredicted RBP8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 HIPK3Q9H422 1215 aa8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 NPIPA1Q9UND3 350 aa8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 TFR2Q9UP52 801 aa8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 RAI2Q9Y5P3 530 aa8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 H7C2Y5 167 aa8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 ERCC1P07992 297 aaPredicted RBP8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 ANXA3P12429 323 aa8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 SLC6A4P31645 630 aa8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 WNT3AP56704 352 aa8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 CBLBQ13191 982 aa8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 ITPK1Q13572 414 aa8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 ELOAQ14241 798 aaKnown RBP8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 SPIN4Q56A73 249 aa8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 C3orf33Q6P1S2 294 aa8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 DRAXINQ8NBI3 349 aaPredicted RBP8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 MAGEH1Q9H213 219 aa8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 ALG2Q9H553 416 aa8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 RETREG1Q9H6L5 497 aa8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 CNTNAP1P78357 1384 aa8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 ATP6AP2A0A1C7CYW4 349 aa8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 HRGP04196 525 aa8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 HSD3B1P14060 373 aa8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 CXCR1P25024 350 aa8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 LSM3P62310 102 aaKnown RBP8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 PRKCDQ05655 676 aa8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 BST1Q10588 318 aa8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 RBM48Q5RL73 367 aaKnown RBP8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 ZNF613Q6PF04 617 aa8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 TWIST2Q8WVJ9 160 aa8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 XAGE5Q8WWM1 108 aa8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 TMEM68Q96MH6 324 aa8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 SLC28A3Q9HAS3 691 aa8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 KIF26BQ2KJY2 2108 aa8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 C5orf51A6NDU8 294 aa8.73□□□□□ -1.01
SHROOM4-203ENST00000460112 FSCN2O14926 492 aa8.73□□□□□ -1.01
SHROOM4-203ENST00000460112 OR1F1O43749 312 aa8.73□□□□□ -1.01
SHROOM4-203ENST00000460112 NSG1P42857 185 aa8.73□□□□□ -1.01
SHROOM4-203ENST00000460112 ZNF41P51814 821 aaPredicted RBP8.73□□□□□ -1.01
SHROOM4-203ENST00000460112 SOX10P56693 466 aa8.73□□□□□ -1.01
SHROOM4-203ENST00000460112 C2orf80Q0P641 193 aa8.73□□□□□ -1.01
SHROOM4-203ENST00000460112 HECTD2Q5U5R9 776 aa8.73□□□□□ -1.01
SHROOM4-203ENST00000460112 FADS3Q9Y5Q0 445 aa8.73□□□□□ -1.01
SHROOM4-203ENST00000460112 ALG5Q9Y673 324 aa8.73□□□□□ -1.01
SHROOM4-203ENST00000460112 TRIM64BA6NI03 449 aa8.73□□□□□ -1.01
SHROOM4-203ENST00000460112 PDLIM1O00151 329 aa8.73□□□□□ -1.01
SHROOM4-203ENST00000460112 CSDE1O75534 798 aaKnown RBP8.73□□□□□ -1.01
SHROOM4-203ENST00000460112 PRAMEF1O95521 474 aa8.73□□□□□ -1.01
SHROOM4-203ENST00000460112 C1RP00736 705 aa8.73□□□□□ -1.01
SHROOM4-203ENST00000460112 IL7RP16871 459 aa8.73□□□□□ -1.01
SHROOM4-203ENST00000460112 CORO1AP31146 461 aaKnown RBP8.73□□□□□ -1.01
SHROOM4-203ENST00000460112 ACTR1AP61163 376 aa8.73□□□□□ -1.01
SHROOM4-203ENST00000460112 ST3GAL4Q11206 333 aa8.73□□□□□ -1.01
SHROOM4-203ENST00000460112 CDK10Q15131 360 aa8.73□□□□□ -1.01
SHROOM4-203ENST00000460112 TAF1AQ15573 450 aaPredicted RBP8.73□□□□□ -1.01
SHROOM4-203ENST00000460112 RNASEH2BQ5TBB1 312 aaKnown RBP8.73□□□□□ -1.01
SHROOM4-203ENST00000460112 SAPCD2Q86UD0 394 aa8.73□□□□□ -1.01
SHROOM4-203ENST00000460112 SATL1Q86VE3 508 aa8.73□□□□□ -1.01
SHROOM4-203ENST00000460112 MRPL41Q8IXM3 137 aaKnown RBP8.73□□□□□ -1.01
SHROOM4-203ENST00000460112 ATP6V1C2Q8NEY4 427 aa8.73□□□□□ -1.01
SHROOM4-203ENST00000460112 CEP76Q8TAP6 659 aa8.73□□□□□ -1.01
SHROOM4-203ENST00000460112 TSPEARQ8WU66 669 aa8.73□□□□□ -1.01
SHROOM4-203ENST00000460112 APOLD1Q96LR9 279 aa8.73□□□□□ -1.01
SHROOM4-203ENST00000460112 MTMR10Q9NXD2 777 aa8.73□□□□□ -1.01
SHROOM4-203ENST00000460112 PCDHGA11Q9Y5H2 935 aa8.73□□□□□ -1.01
SHROOM4-203ENST00000460112 PMF1-BGLAPU3KQ54 211 aa8.73□□□□□ -1.01
SHROOM4-203ENST00000460112 PHRF1Q9P1Y6 1649 aaKnown RBP8.73□□□□□ -1.01
SHROOM4-203ENST00000460112 A0A075B6Q4 140 aa8.73□□□□□ -1.01
SHROOM4-203ENST00000460112 SCDO00767 359 aa8.73□□□□□ -1.01
SHROOM4-203ENST00000460112 AIREO43918 545 aa8.73□□□□□ -1.01
SHROOM4-203ENST00000460112 PKMP14618 531 aaKnown RBP8.73□□□□□ -1.01
SHROOM4-203ENST00000460112 NFKB2Q00653 900 aa8.73□□□□□ -1.01
SHROOM4-203ENST00000460112 BNIP1Q12981 228 aa8.73□□□□□ -1.01
SHROOM4-203ENST00000460112 PUM1Q14671 1186 aaKnown RBP eCLIP8.73□□□□□ -1.01
SHROOM4-203ENST00000460112 POMZP3Q6PJE2 187 aa8.73□□□□□ -1.01
SHROOM4-203ENST00000460112 C15orf52Q6ZUT6 534 aaKnown RBP8.73□□□□□ -1.01
SHROOM4-203ENST00000460112 ZNF627Q7L945 461 aa8.73□□□□□ -1.01
SHROOM4-203ENST00000460112 CEP97Q8IW35 865 aa8.73□□□□□ -1.01
SHROOM4-203ENST00000460112 SLC44A1Q8WWI5 657 aa8.73□□□□□ -1.01
SHROOM4-203ENST00000460112 FAM83DQ9H4H8 585 aa8.73□□□□□ -1.01
SHROOM4-203ENST00000460112 ISPDA4D126 451 aa8.73□□□□□ -1.01
SHROOM4-203ENST00000460112 GJB6O95452 261 aa8.73□□□□□ -1.01
SHROOM4-203ENST00000460112 ZNF33AQ06730 810 aa8.73□□□□□ -1.01
SHROOM4-203ENST00000460112 EGFLAMQ63HQ2 1017 aa8.73□□□□□ -1.01
SHROOM4-203ENST00000460112 UTS2BQ765I0 119 aa8.73□□□□□ -1.01
SHROOM4-203ENST00000460112 SLAIN1Q8ND83 568 aa8.73□□□□□ -1.01
SHROOM4-203ENST00000460112 PPP1R13LQ8WUF5 828 aa8.73□□□□□ -1.01
SHROOM4-203ENST00000460112 FCRL2Q96LA5 508 aaPredicted RBP8.73□□□□□ -1.01
SHROOM4-203ENST00000460112 DAPL1A0PJW8 107 aa8.73□□□□□ -1.01
SHROOM4-203ENST00000460112 PEX12O00623 359 aa8.73□□□□□ -1.01
SHROOM4-203ENST00000460112 MEIS2O14770 477 aa8.73□□□□□ -1.01
SHROOM4-203ENST00000460112 MID1O15344 667 aa8.73□□□□□ -1.01
SHROOM4-203ENST00000460112 ENDOUP21128 410 aaKnown RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms