RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 KIR2DS5Q14953 304 aa15.19■□□□□ 0.02
SDF4-204ENST00000459994 LINC00303Q3SY05 128 aa15.19■□□□□ 0.02
SDF4-204ENST00000459994 KRT71Q3SY84 523 aa15.19■□□□□ 0.02
SDF4-204ENST00000459994 CEP85LQ5SZL2 805 aa15.19■□□□□ 0.02
SDF4-204ENST00000459994 RBM20Q5T481 1227 aaKnown RBP15.19■□□□□ 0.02
SDF4-204ENST00000459994 HECTD2Q5U5R9 776 aa15.19■□□□□ 0.02
SDF4-204ENST00000459994 FAM83HQ6ZRV2 1179 aaPredicted RBP15.19■□□□□ 0.02
SDF4-204ENST00000459994 DET1Q7L5Y6 550 aa15.19■□□□□ 0.02
SDF4-204ENST00000459994 FAM129CQ86XR2 697 aa15.19■□□□□ 0.02
SDF4-204ENST00000459994 GPATCH11Q8N954 259 aa15.19■□□□□ 0.02
SDF4-204ENST00000459994 AGBL5Q8NDL9 886 aa15.19■□□□□ 0.02
SDF4-204ENST00000459994 KCNJ9Q92806 393 aa15.19■□□□□ 0.02
SDF4-204ENST00000459994 PANX3Q96QZ0 392 aa15.19■□□□□ 0.02
SDF4-204ENST00000459994 TAAR9Q96RI9 348 aa15.19■□□□□ 0.02
SDF4-204ENST00000459994 TIMM29Q9BSF4 260 aa15.19■□□□□ 0.02
SDF4-204ENST00000459994 TSSK1BQ9BXA7 367 aa15.19■□□□□ 0.02
SDF4-204ENST00000459994 LATS2Q9NRM7 1088 aa15.19■□□□□ 0.02
SDF4-204ENST00000459994 ZNF446Q9NWS9 450 aa15.19■□□□□ 0.02
SDF4-204ENST00000459994 KLHL42Q9P2K6 505 aa15.19■□□□□ 0.02
SDF4-204ENST00000459994 MED16Q9Y2X0 877 aa15.19■□□□□ 0.02
SDF4-204ENST00000459994 OR2AG2A6NM03 316 aa15.18■□□□□ 0.02
SDF4-204ENST00000459994 KCNJ13O60928 360 aa15.18■□□□□ 0.02
SDF4-204ENST00000459994 FTH1P02794 183 aa15.18■□□□□ 0.02
SDF4-204ENST00000459994 TYRP1P17643 537 aa15.18■□□□□ 0.02
SDF4-204ENST00000459994 XRCC1P18887 633 aaPredicted RBP15.18■□□□□ 0.02
SDF4-204ENST00000459994 FDXRP22570 491 aa15.18■□□□□ 0.02
SDF4-204ENST00000459994 CSTF2P33240 577 aaKnown RBP eCLIP15.18■□□□□ 0.02
SDF4-204ENST00000459994 SKIV2L2P42285 1042 aaKnown RBP15.18■□□□□ 0.02
SDF4-204ENST00000459994 MROH9Q5TGP6 573 aa15.18■□□□□ 0.02
SDF4-204ENST00000459994 WDR74Q6RFH5 385 aaPredicted RBP15.18■□□□□ 0.02
SDF4-204ENST00000459994 TIFABQ6ZNK6 161 aa15.18■□□□□ 0.02
SDF4-204ENST00000459994 TRAPPC5Q8IUR0 188 aa15.18■□□□□ 0.02
SDF4-204ENST00000459994 BEND7Q8N7W2 519 aaPredicted RBP15.18■□□□□ 0.02
SDF4-204ENST00000459994 EXD3Q8N9H8 876 aa15.18■□□□□ 0.02
SDF4-204ENST00000459994 ACVR1CQ8NER5 493 aa15.18■□□□□ 0.02
SDF4-204ENST00000459994 NKD1Q969G9 470 aa15.18■□□□□ 0.02
SDF4-204ENST00000459994 ISL2Q96A47 359 aa15.18■□□□□ 0.02
SDF4-204ENST00000459994 TSPAN17Q96FV3 270 aa15.18■□□□□ 0.02
SDF4-204ENST00000459994 ELMO2Q96JJ3 720 aa15.18■□□□□ 0.02
SDF4-204ENST00000459994 RUFY1Q96T51 708 aa15.18■□□□□ 0.02
SDF4-204ENST00000459994 NDNQ99608 321 aa15.18■□□□□ 0.02
SDF4-204ENST00000459994 CCM2Q9BSQ5 444 aa15.18■□□□□ 0.02
SDF4-204ENST00000459994 SLC39A1Q9NY26 324 aa15.18■□□□□ 0.02
SDF4-204ENST00000459994 TAS2R13Q9NYV9 303 aa15.18■□□□□ 0.02
SDF4-204ENST00000459994 SLC39A10Q9ULF5 831 aa15.18■□□□□ 0.02
SDF4-204ENST00000459994 PCDHGA4Q9Y5G9 962 aa15.18■□□□□ 0.02
SDF4-204ENST00000459994 COL6A6A6NMZ7 2263 aa15.17■□□□□ 0.02
SDF4-204ENST00000459994 C17orf113A0A1B0GUU1 675 aa15.17■□□□□ 0.02
SDF4-204ENST00000459994 LILRA5A6NI73 299 aa15.17■□□□□ 0.02
SDF4-204ENST00000459994 SMIM23A6NLE4 172 aa15.17■□□□□ 0.02
SDF4-204ENST00000459994 PDZK1P1A8MUH7 402 aa15.17■□□□□ 0.02
SDF4-204ENST00000459994 TRIM49D1C9J1S8 452 aa15.17■□□□□ 0.02
SDF4-204ENST00000459994 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.17■□□□□ 0.02
SDF4-204ENST00000459994 KPNA5O15131 536 aa15.17■□□□□ 0.02
SDF4-204ENST00000459994 ZW10O43264 779 aa15.17■□□□□ 0.02
SDF4-204ENST00000459994 NIPSNAP2O75323 286 aa15.17■□□□□ 0.02
SDF4-204ENST00000459994 VPS26AO75436 327 aa15.17■□□□□ 0.02
SDF4-204ENST00000459994 CHRM3P20309 590 aa15.17■□□□□ 0.02
SDF4-204ENST00000459994 PBLDP30039 288 aaPredicted RBP15.17■□□□□ 0.02
SDF4-204ENST00000459994 EPHA4P54764 986 aa15.17■□□□□ 0.02
SDF4-204ENST00000459994 SLC12A2P55011 1212 aa15.17■□□□□ 0.02
SDF4-204ENST00000459994 TAS2R39P59534 338 aa15.17■□□□□ 0.02
SDF4-204ENST00000459994 PPP1CAP62136 330 aa15.17■□□□□ 0.02
SDF4-204ENST00000459994 TIAL1Q01085 375 aaKnown RBP eCLIP15.17■□□□□ 0.02
SDF4-204ENST00000459994 BMPR2Q13873 1038 aa15.17■□□□□ 0.02
SDF4-204ENST00000459994 NFE2L1Q14494 772 aa15.17■□□□□ 0.02
SDF4-204ENST00000459994 USP10Q14694 798 aaKnown RBP15.17■□□□□ 0.02
SDF4-204ENST00000459994 ZKSCAN8Q15776 578 aaPredicted RBP15.17■□□□□ 0.02
SDF4-204ENST00000459994 MANEAQ5SRI9 462 aa15.17■□□□□ 0.02
SDF4-204ENST00000459994 UGT3A1Q6NUS8 523 aa15.17■□□□□ 0.02
SDF4-204ENST00000459994 ABRAXAS1Q6UWZ7 409 aa15.17■□□□□ 0.02
SDF4-204ENST00000459994 TMEM26Q6ZUK4 368 aa15.17■□□□□ 0.02
SDF4-204ENST00000459994 LSM14AQ8ND56 463 aaKnown RBP15.17■□□□□ 0.02
SDF4-204ENST00000459994 MZB1Q8WU39 189 aa15.17■□□□□ 0.02
SDF4-204ENST00000459994 RSC1A1Q92681 617 aa15.17■□□□□ 0.02
SDF4-204ENST00000459994 SPRY4Q9C004 299 aa15.17■□□□□ 0.02
SDF4-204ENST00000459994 POPDC3Q9HBV1 291 aa15.17■□□□□ 0.02
SDF4-204ENST00000459994 AKAP7Q9P0M2 348 aaPredicted RBP15.17■□□□□ 0.02
SDF4-204ENST00000459994 CTNNAL1Q9UBT7 734 aa15.17■□□□□ 0.02
SDF4-204ENST00000459994 PSMD13Q9UNM6 376 aa15.17■□□□□ 0.02
SDF4-204ENST00000459994 DHRS7Q9Y394 339 aa15.17■□□□□ 0.02
SDF4-204ENST00000459994 PCDHGA3Q9Y5H0 932 aa15.17■□□□□ 0.02
SDF4-204ENST00000459994 GCN1Q92616 2671 aaKnown RBP15.17■□□□□ 0.02
SDF4-204ENST00000459994 MN1Q10571 1320 aaPredicted RBP15.17■□□□□ 0.02
SDF4-204ENST00000459994 CFAP46Q8IYW2 2715 aa15.16■□□□□ 0.02
SDF4-204ENST00000459994 MGAT4DA6NG13 374 aa15.16■□□□□ 0.02
SDF4-204ENST00000459994 OR5K4A6NMS3 321 aa15.16■□□□□ 0.02
SDF4-204ENST00000459994 IQCF5A8MTL0 148 aa15.16■□□□□ 0.02
SDF4-204ENST00000459994 E5RI56 91 aa15.16■□□□□ 0.02
SDF4-204ENST00000459994 AGPSO00116 658 aa15.16■□□□□ 0.02
SDF4-204ENST00000459994 KIF1CO43896 1103 aaKnown RBP15.16■□□□□ 0.02
SDF4-204ENST00000459994 POP7O75817 140 aaKnown RBP15.16■□□□□ 0.02
SDF4-204ENST00000459994 SASH3O75995 380 aa15.16■□□□□ 0.02
SDF4-204ENST00000459994 VIPP01282 170 aa15.16■□□□□ 0.02
SDF4-204ENST00000459994 SLC2A4P14672 509 aa15.16■□□□□ 0.02
SDF4-204ENST00000459994 STMN1P16949 149 aa15.16■□□□□ 0.02
SDF4-204ENST00000459994 CRABP2P29373 138 aa15.16■□□□□ 0.02
SDF4-204ENST00000459994 MAGEA12P43365 314 aa15.16■□□□□ 0.02
SDF4-204ENST00000459994 SERPINB8P50452 374 aa15.16■□□□□ 0.02
SDF4-204ENST00000459994 CSRP3P50461 194 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms