RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 PAMP19021 973 aa9.67□□□□□ -0.86
HDLBP-228ENST00000459788 OGNP20774 298 aaKnown RBP9.67□□□□□ -0.86
HDLBP-228ENST00000459788 AGXTP21549 392 aa9.67□□□□□ -0.86
HDLBP-228ENST00000459788 PKLRP30613 574 aa9.67□□□□□ -0.86
HDLBP-228ENST00000459788 CCR7P32248 378 aa9.67□□□□□ -0.86
HDLBP-228ENST00000459788 CASRP41180 1078 aa9.67□□□□□ -0.86
HDLBP-228ENST00000459788 BASP1P80723 227 aaKnown RBP9.67□□□□□ -0.86
HDLBP-228ENST00000459788 KLRB1Q12918 225 aa9.67□□□□□ -0.86
HDLBP-228ENST00000459788 GPS2Q13227 327 aa9.67□□□□□ -0.86
HDLBP-228ENST00000459788 ERV3-1Q14264 604 aa9.67□□□□□ -0.86
HDLBP-228ENST00000459788 KCNJ11Q14654 390 aa9.67□□□□□ -0.86
HDLBP-228ENST00000459788 CYP1B1Q16678 543 aa9.67□□□□□ -0.86
HDLBP-228ENST00000459788 TYSND1Q2T9J0 566 aa9.67□□□□□ -0.86
HDLBP-228ENST00000459788 PAPD7Q5XG87 772 aaKnown RBP9.67□□□□□ -0.86
HDLBP-228ENST00000459788 KIAA0930Q6ICG6 404 aaPredicted RBP9.67□□□□□ -0.86
HDLBP-228ENST00000459788 RHBDD2Q6NTF9 364 aa9.67□□□□□ -0.86
HDLBP-228ENST00000459788 PRICKLE2Q7Z3G6 844 aa9.67□□□□□ -0.86
HDLBP-228ENST00000459788 RAB42Q8N4Z0 105 aa9.67□□□□□ -0.86
HDLBP-228ENST00000459788 TAB3Q8N5C8 712 aaPredicted RBP9.67□□□□□ -0.86
HDLBP-228ENST00000459788 OR2L8Q8NGY9 312 aa9.67□□□□□ -0.86
HDLBP-228ENST00000459788 OR1L3Q8NH93 324 aa9.67□□□□□ -0.86
HDLBP-228ENST00000459788 FLVCR1-AS1Q8TAF5 88 aa9.67□□□□□ -0.86
HDLBP-228ENST00000459788 GSDMBQ8TAX9 411 aa9.67□□□□□ -0.86
HDLBP-228ENST00000459788 NAT14Q8WUY8 206 aa9.67□□□□□ -0.86
HDLBP-228ENST00000459788 MR1Q95460 341 aa9.67□□□□□ -0.86
HDLBP-228ENST00000459788 RAD51AP1Q96B01 352 aa9.67□□□□□ -0.86
HDLBP-228ENST00000459788 CLIP3Q96DZ5 547 aa9.67□□□□□ -0.86
HDLBP-228ENST00000459788 ABHD17AQ96GS6 310 aa9.67□□□□□ -0.86
HDLBP-228ENST00000459788 PCMTD2Q9NV79 361 aa9.67□□□□□ -0.86
HDLBP-228ENST00000459788 KLHL42Q9P2K6 505 aa9.67□□□□□ -0.86
HDLBP-228ENST00000459788 MAN2B2Q9Y2E5 1009 aa9.67□□□□□ -0.86
HDLBP-228ENST00000459788 KLK4Q9Y5K2 254 aa9.67□□□□□ -0.86
HDLBP-228ENST00000459788 MRPS18BQ9Y676 258 aaKnown RBP9.67□□□□□ -0.86
HDLBP-228ENST00000459788 DOCK10Q96BY6 2186 aa9.67□□□□□ -0.86
HDLBP-228ENST00000459788 CNTRLQ7Z7A1 2325 aa9.66□□□□□ -0.86
HDLBP-228ENST00000459788 FAM237BA0A1B0GVD1 139 aa9.66□□□□□ -0.86
HDLBP-228ENST00000459788 CDC14CA4D256 554 aa9.66□□□□□ -0.86
HDLBP-228ENST00000459788 TARM1B6A8C7 271 aa9.66□□□□□ -0.86
HDLBP-228ENST00000459788 C9J4A7 227 aa9.66□□□□□ -0.86
HDLBP-228ENST00000459788 H3BMH7 237 aa9.66□□□□□ -0.86
HDLBP-228ENST00000459788 RASGRF2O14827 1237 aa9.66□□□□□ -0.86
HDLBP-228ENST00000459788 ZSCAN12O43309 604 aa9.66□□□□□ -0.86
HDLBP-228ENST00000459788 ONECUT2O95948 504 aa9.66□□□□□ -0.86
HDLBP-228ENST00000459788 ZSCAN5DPP0CG00 497 aa9.66□□□□□ -0.86
HDLBP-228ENST00000459788 TPBGLP0DKB5 382 aa9.66□□□□□ -0.86
HDLBP-228ENST00000459788 CD9P21926 228 aa9.66□□□□□ -0.86
HDLBP-228ENST00000459788 GABRA4P48169 554 aa9.66□□□□□ -0.86
HDLBP-228ENST00000459788 ARCN1P48444 511 aaKnown RBP9.66□□□□□ -0.86
HDLBP-228ENST00000459788 ARSFP54793 590 aa9.66□□□□□ -0.86
HDLBP-228ENST00000459788 RRADP55042 308 aa9.66□□□□□ -0.86
HDLBP-228ENST00000459788 SESN2P58004 480 aaPredicted RBP9.66□□□□□ -0.86
HDLBP-228ENST00000459788 HSPA14Q0VDF9 509 aa9.66□□□□□ -0.86
HDLBP-228ENST00000459788 PRKG2Q13237 762 aa9.66□□□□□ -0.86
HDLBP-228ENST00000459788 GBX1Q14549 363 aa9.66□□□□□ -0.86
HDLBP-228ENST00000459788 SEMA3AQ14563 771 aa9.66□□□□□ -0.86
HDLBP-228ENST00000459788 ZC3H12BQ5HYM0 836 aaKnown RBP9.66□□□□□ -0.86
HDLBP-228ENST00000459788 ZNF385CQ66K41 422 aaPredicted RBP9.66□□□□□ -0.86
HDLBP-228ENST00000459788 PTRHD1Q6GMV3 140 aaKnown RBP9.66□□□□□ -0.86
HDLBP-228ENST00000459788 CDHR3Q6ZTQ4 885 aa9.66□□□□□ -0.86
HDLBP-228ENST00000459788 MED25Q71SY5 747 aa9.66□□□□□ -0.86
HDLBP-228ENST00000459788 SYTL1Q8IYJ3 562 aa9.66□□□□□ -0.86
HDLBP-228ENST00000459788 PRELID2Q8N945 189 aa9.66□□□□□ -0.86
HDLBP-228ENST00000459788 TMEM102Q8N9M5 508 aaPredicted RBP9.66□□□□□ -0.86
HDLBP-228ENST00000459788 SLC38A9Q8NBW4 561 aa9.66□□□□□ -0.86
HDLBP-228ENST00000459788 ACTRT1Q8TDG2 376 aa9.66□□□□□ -0.86
HDLBP-228ENST00000459788 ADAMTS17Q8TE56 1095 aa9.66□□□□□ -0.86
HDLBP-228ENST00000459788 GRK7Q8WTQ7 553 aa9.66□□□□□ -0.86
HDLBP-228ENST00000459788 DLG3Q92796 817 aa9.66□□□□□ -0.86
HDLBP-228ENST00000459788 N4BP2L2Q92802 583 aaPredicted RBP9.66□□□□□ -0.86
HDLBP-228ENST00000459788 ZUFSPQ96AP4 578 aa9.66□□□□□ -0.86
HDLBP-228ENST00000459788 FOPNLQ96NB1 174 aa9.66□□□□□ -0.86
HDLBP-228ENST00000459788 MENTQ9BUN1 341 aa9.66□□□□□ -0.86
HDLBP-228ENST00000459788 CHST8Q9H2A9 424 aa9.66□□□□□ -0.86
HDLBP-228ENST00000459788 MLXIPLQ9NP71 852 aa9.66□□□□□ -0.86
HDLBP-228ENST00000459788 INTS10Q9NVR2 710 aaKnown RBP9.66□□□□□ -0.86
HDLBP-228ENST00000459788 TCFL5Q9UL49 500 aa9.66□□□□□ -0.86
HDLBP-228ENST00000459788 G3BP2Q9UN86 482 aaKnown RBP9.66□□□□□ -0.86
HDLBP-228ENST00000459788 PLCL2Q9UPR0 1127 aa9.66□□□□□ -0.86
HDLBP-228ENST00000459788 COMMD10Q9Y6G5 202 aa9.66□□□□□ -0.86
HDLBP-228ENST00000459788 TNRC6AQ8NDV7 1962 aaKnown RBP9.66□□□□□ -0.86
HDLBP-228ENST00000459788 ZNF749O43361 778 aa9.65□□□□□ -0.86
HDLBP-228ENST00000459788 PHF2O75151 1096 aa9.65□□□□□ -0.86
HDLBP-228ENST00000459788 CEACAM4O75871 244 aa9.65□□□□□ -0.86
HDLBP-228ENST00000459788 OR2B3O76000 313 aa9.65□□□□□ -0.86
HDLBP-228ENST00000459788 CAPN1P07384 714 aa9.65□□□□□ -0.86
HDLBP-228ENST00000459788 PIM1P11309 404 aaPredicted RBP9.65□□□□□ -0.86
HDLBP-228ENST00000459788 HSD17B2P37059 387 aa9.65□□□□□ -0.86
HDLBP-228ENST00000459788 GCGRP47871 477 aa9.65□□□□□ -0.86
HDLBP-228ENST00000459788 FNTAP49354 379 aa9.65□□□□□ -0.86
HDLBP-228ENST00000459788 ABRQ12979 859 aa9.65□□□□□ -0.86
HDLBP-228ENST00000459788 NCF4Q15080 339 aa9.65□□□□□ -0.86
HDLBP-228ENST00000459788 TCTE1Q5JU00 501 aa9.65□□□□□ -0.86
HDLBP-228ENST00000459788 FAM198BQ6UWH4 519 aa9.65□□□□□ -0.86
HDLBP-228ENST00000459788 NEK10Q6ZWH5 1172 aa9.65□□□□□ -0.86
HDLBP-228ENST00000459788 OTOAQ7RTW8 1153 aa9.65□□□□□ -0.86
HDLBP-228ENST00000459788 RAB43Q86YS6 212 aa9.65□□□□□ -0.86
HDLBP-228ENST00000459788 DNAJC22Q8N4W6 341 aa9.65□□□□□ -0.86
HDLBP-228ENST00000459788 GABPB2Q8TAK5 448 aaPredicted RBP9.65□□□□□ -0.86
HDLBP-228ENST00000459788 LPGAT1Q92604 370 aa9.65□□□□□ -0.86
HDLBP-228ENST00000459788 PPM1MQ96MI6 270 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms