RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 CUZD1Q86UP6 607 aa5.31□□□□□ -1.56
VPS41-209ENST00000457055 FAM228AQ86W67 206 aa5.31□□□□□ -1.56
VPS41-209ENST00000457055 GAS2L3Q86XJ1 694 aa5.31□□□□□ -1.56
VPS41-209ENST00000457055 NME9Q86XW9 330 aa5.31□□□□□ -1.56
VPS41-209ENST00000457055 FOXRED2Q8IWF2 684 aa5.31□□□□□ -1.56
VPS41-209ENST00000457055 ADGRF2Q8IZF7 708 aa5.31□□□□□ -1.56
VPS41-209ENST00000457055 OFCC1Q8IZS5 231 aa5.31□□□□□ -1.56
VPS41-209ENST00000457055 GPR137CQ8N3F9 429 aa5.31□□□□□ -1.56
VPS41-209ENST00000457055 POC5Q8NA72 575 aa5.31□□□□□ -1.56
VPS41-209ENST00000457055 KDM1BQ8NB78 822 aa5.31□□□□□ -1.56
VPS41-209ENST00000457055 RBM15BQ8NDT2 890 aaKnown RBP5.31□□□□□ -1.56
VPS41-209ENST00000457055 STEAP2Q8NFT2 490 aa5.31□□□□□ -1.56
VPS41-209ENST00000457055 BBS10Q8TAM1 723 aa5.31□□□□□ -1.56
VPS41-209ENST00000457055 CYP2W1Q8TAV3 490 aa5.31□□□□□ -1.56
VPS41-209ENST00000457055 CSGALNACT1Q8TDX6 532 aa5.31□□□□□ -1.56
VPS41-209ENST00000457055 SLC44A1Q8WWI5 657 aa5.31□□□□□ -1.56
VPS41-209ENST00000457055 RLN3Q8WXF3 142 aa5.31□□□□□ -1.56
VPS41-209ENST00000457055 POMGNT1Q8WZA1 660 aa5.31□□□□□ -1.56
VPS41-209ENST00000457055 PPP1R36Q96LQ0 422 aa5.31□□□□□ -1.56
VPS41-209ENST00000457055 CCNL2Q96S94 520 aaPredicted RBP5.31□□□□□ -1.56
VPS41-209ENST00000457055 INTS14Q96SY0 518 aa5.31□□□□□ -1.56
VPS41-209ENST00000457055 MFFQ9GZY8 342 aa5.31□□□□□ -1.56
VPS41-209ENST00000457055 QRSL1Q9H0R6 528 aaKnown RBP5.31□□□□□ -1.56
VPS41-209ENST00000457055 SLC25A18Q9H1K4 315 aa5.31□□□□□ -1.56
VPS41-209ENST00000457055 SP140LQ9H930 580 aa5.31□□□□□ -1.56
VPS41-209ENST00000457055 ARMT1Q9H993 441 aa5.31□□□□□ -1.56
VPS41-209ENST00000457055 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.31□□□□□ -1.56
VPS41-209ENST00000457055 INIPQ9NRY2 104 aa5.31□□□□□ -1.56
VPS41-209ENST00000457055 C20orf96Q9NUD7 363 aaPredicted RBP5.31□□□□□ -1.56
VPS41-209ENST00000457055 H2AFY2Q9P0M6 372 aaPredicted RBP5.31□□□□□ -1.56
VPS41-209ENST00000457055 PEF1Q9UBV8 284 aaKnown RBP5.31□□□□□ -1.56
VPS41-209ENST00000457055 CYB5R1Q9UHQ9 305 aa5.31□□□□□ -1.56
VPS41-209ENST00000457055 LNPEPQ9UIQ6 1025 aa5.31□□□□□ -1.56
VPS41-209ENST00000457055 GGA2Q9UJY4 613 aa5.31□□□□□ -1.56
VPS41-209ENST00000457055 HSF4Q9ULV5 492 aa5.31□□□□□ -1.56
VPS41-209ENST00000457055 GINS2Q9Y248 185 aa5.31□□□□□ -1.56
VPS41-209ENST00000457055 B3GALT1Q9Y5Z6 326 aa5.31□□□□□ -1.56
VPS41-209ENST00000457055 PUS1Q9Y606 427 aaKnown RBP eCLIP5.31□□□□□ -1.56
VPS41-209ENST00000457055 TEX264Q9Y6I9 313 aa5.31□□□□□ -1.56
VPS41-209ENST00000457055 COL5A2P05997 1499 aaPredicted RBP5.31□□□□□ -1.56
VPS41-209ENST00000457055 A0A087WZY1 265 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 A0A0B4J293 547 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 A0A0J9YYE9 177 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 A0A1W2PQ67 120 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 EFCAB10A6NFE3 127 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 SRRM3A6NNA2 597 aaPredicted RBP5.3□□□□□ -1.56
VPS41-209ENST00000457055 MYO1GB0I1T2 1018 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 ISM1B1AKI9 464 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 ZNF701M0R085 212 aaPredicted RBP5.3□□□□□ -1.56
VPS41-209ENST00000457055 GRM8O00222 908 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 FCHO1O14526 889 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 MAP2K7O14733 419 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 SLC16A6O15403 523 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 KCNQ3O43525 872 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 TGM5O43548 720 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 ASNA1O43681 348 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 TBX19O60806 448 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 OPHN1O60890 802 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 B4GALT2O60909 372 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 TRBC1P01850 177 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 FABP1P07148 127 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 SPARCP09486 303 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 CNPP09543 421 aaKnown RBP5.3□□□□□ -1.56
VPS41-209ENST00000457055 F3P13726 295 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 ERCC2P18074 760 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 TNNI3P19429 210 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 CYP3A5P20815 502 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 TYK2P29597 1187 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 CD40LGP29965 261 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 SDHAP31040 664 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 YWHABP31946 246 aaKnown RBP5.3□□□□□ -1.56
VPS41-209ENST00000457055 RORAP35398 523 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 GGT5P36269 586 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 SLC1A1P43005 524 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 GSTM5P46439 218 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 CEBPGP53567 150 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 SLC16A1P53985 500 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 SNU13P55769 128 aaKnown RBP5.3□□□□□ -1.56
VPS41-209ENST00000457055 CLDN8P56748 225 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 BPIFB4P59827 614 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 RAB1AP62820 205 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 NOMO3P69849 1222 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 KRTAP1-1Q07627 177 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 TUBB3Q13509 450 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 P3H1Q32P28 736 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 MPPE1Q53F39 396 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 YIF1BQ5BJH7 314 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 NOMO2Q5JPE7 1267 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 TOR2AQ5JU69 321 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 COLEC12Q5KU26 742 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 DCST1Q5T197 706 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 FAM171A1Q5VUB5 890 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 ZDHHC20Q5W0Z9 365 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 CST9LP1Q5W188 147 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 NAPEPLDQ6IQ20 393 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 CLEC9AQ6UXN8 241 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 RTL4Q6ZR62 310 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 COLCA1Q6ZS62 124 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 SLC24A5Q71RS6 500 aa5.3□□□□□ -1.56
VPS41-209ENST00000457055 TMPRSS9Q7Z410 1059 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms