RNA–Protein interactions for RNA: ENST00000456953.5

SNHG17-208, Transcript of small nucleolar RNA host gene 17, human

TSL 3 BASIC

Gene SNHG17, Length 546 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG17-208	ENST00000456953	LRRC57	Q8N9N7	239 aa		12.69	□□□□□ -0.38
SNHG17-208	ENST00000456953	SPATA22	Q8NHS9	363 aa		12.69	□□□□□ -0.38
SNHG17-208	ENST00000456953	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	12.69	□□□□□ -0.38
SNHG17-208	ENST00000456953	LINC00615	Q96LM1	132 aa	Predicted RBP	12.69	□□□□□ -0.38
SNHG17-208	ENST00000456953	MAGEB10	Q96LZ2	347 aa	Predicted RBP	12.69	□□□□□ -0.38
SNHG17-208	ENST00000456953	LMF1	Q96S06	567 aa		12.69	□□□□□ -0.38
SNHG17-208	ENST00000456953	CHRNA10	Q9GZZ6	450 aa		12.69	□□□□□ -0.38
SNHG17-208	ENST00000456953	SPRTN	Q9H040	489 aa	Predicted RBP	12.69	□□□□□ -0.38
SNHG17-208	ENST00000456953	FAM60A	Q9NP50	221 aa		12.69	□□□□□ -0.38
SNHG17-208	ENST00000456953	IL17C	Q9P0M4	197 aa		12.69	□□□□□ -0.38
SNHG17-208	ENST00000456953	DHCR7	Q9UBM7	475 aa	Known RBP	12.69	□□□□□ -0.38
SNHG17-208	ENST00000456953	FAM8A1	Q9UBU6	413 aa		12.69	□□□□□ -0.38
SNHG17-208	ENST00000456953	CDC23	Q9UJX2	597 aa		12.69	□□□□□ -0.38
SNHG17-208	ENST00000456953	AMFR	Q9UKV5	643 aa		12.69	□□□□□ -0.38
SNHG17-208	ENST00000456953	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	12.69	□□□□□ -0.38
SNHG17-208	ENST00000456953	SOCS6	O14544	535 aa		12.68	□□□□□ -0.38
SNHG17-208	ENST00000456953	GAPDHS	O14556	408 aa	Predicted RBP	12.68	□□□□□ -0.38
SNHG17-208	ENST00000456953	PMPCB	O75439	489 aa		12.68	□□□□□ -0.38
SNHG17-208	ENST00000456953	POLB	P06746	335 aa		12.68	□□□□□ -0.38
SNHG17-208	ENST00000456953	AP1B1	Q10567	949 aa		12.68	□□□□□ -0.38
SNHG17-208	ENST00000456953	MFAP5	Q13361	173 aa		12.68	□□□□□ -0.38
SNHG17-208	ENST00000456953	BCL7A	Q4VC05	210 aa		12.68	□□□□□ -0.38
SNHG17-208	ENST00000456953	SPESP1	Q6UW49	350 aa		12.68	□□□□□ -0.38
SNHG17-208	ENST00000456953	KIRREL2	Q6UWL6	708 aa		12.68	□□□□□ -0.38
SNHG17-208	ENST00000456953	AMIGO1	Q86WK6	493 aa		12.68	□□□□□ -0.38
SNHG17-208	ENST00000456953	CPNE8	Q86YQ8	564 aa		12.68	□□□□□ -0.38
SNHG17-208	ENST00000456953	CFAP206	Q8IYR0	622 aa		12.68	□□□□□ -0.38
SNHG17-208	ENST00000456953	ZNF655	Q8N720	491 aa	Predicted RBP	12.68	□□□□□ -0.38
SNHG17-208	ENST00000456953	CATSPER1	Q8NEC5	780 aa		12.68	□□□□□ -0.38
SNHG17-208	ENST00000456953	OR1N1	Q8NGS0	311 aa		12.68	□□□□□ -0.38
SNHG17-208	ENST00000456953	FKBP10	Q96AY3	582 aa		12.68	□□□□□ -0.38
SNHG17-208	ENST00000456953	FERD3L	Q96RJ6	166 aa		12.68	□□□□□ -0.38
SNHG17-208	ENST00000456953	NDC1	Q9BTX1	674 aa		12.68	□□□□□ -0.38
SNHG17-208	ENST00000456953	WDR54	Q9H977	334 aa		12.68	□□□□□ -0.38
SNHG17-208	ENST00000456953	MRM3	Q9HC36	420 aa	Known RBP	12.68	□□□□□ -0.38
SNHG17-208	ENST00000456953	ACTR10	Q9NZ32	417 aa		12.68	□□□□□ -0.38
SNHG17-208	ENST00000456953	HACD3	Q9P035	362 aa		12.68	□□□□□ -0.38
SNHG17-208	ENST00000456953	PKP3	Q9Y446	797 aa		12.68	□□□□□ -0.38
SNHG17-208	ENST00000456953	HS3ST3B1	Q9Y662	390 aa		12.68	□□□□□ -0.38
SNHG17-208	ENST00000456953	HCRTR1	O43613	425 aa		12.67	□□□□□ -0.38
SNHG17-208	ENST00000456953	DIAPH2	O60879	1101 aa		12.67	□□□□□ -0.38
SNHG17-208	ENST00000456953	AGA	P20933	346 aa		12.67	□□□□□ -0.38
SNHG17-208	ENST00000456953	CA7	P43166	264 aa		12.67	□□□□□ -0.38
SNHG17-208	ENST00000456953	GABRA4	P48169	554 aa		12.67	□□□□□ -0.38
SNHG17-208	ENST00000456953	TAS2R40	P59535	323 aa		12.67	□□□□□ -0.38
SNHG17-208	ENST00000456953	KRTAP10-9	P60411	292 aa		12.67	□□□□□ -0.38
SNHG17-208	ENST00000456953	GNG11	P61952	73 aa		12.67	□□□□□ -0.38
SNHG17-208	ENST00000456953	DEFB110	Q30KQ9	67 aa		12.67	□□□□□ -0.38
SNHG17-208	ENST00000456953	TUBB8	Q3ZCM7	444 aa		12.67	□□□□□ -0.38
SNHG17-208	ENST00000456953	FAM182A	Q5T1J6	154 aa		12.67	□□□□□ -0.38
SNHG17-208	ENST00000456953	LRRC38	Q5VT99	294 aa		12.67	□□□□□ -0.38
SNHG17-208	ENST00000456953	LINC00696	Q6ZRV3	163 aa		12.67	□□□□□ -0.38
SNHG17-208	ENST00000456953	ADGRF3	Q8IZF5	1079 aa		12.67	□□□□□ -0.38
SNHG17-208	ENST00000456953	LILRA3	Q8N6C8	439 aa	Predicted RBP	12.67	□□□□□ -0.38
SNHG17-208	ENST00000456953	UBL4B	Q8N7F7	174 aa		12.67	□□□□□ -0.38
SNHG17-208	ENST00000456953	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	12.67	□□□□□ -0.38	2e-7	■□□□□ 10.2
SNHG17-208	ENST00000456953	OR52E1	Q8NGJ3	308 aa		12.67	□□□□□ -0.38
SNHG17-208	ENST00000456953	HM13	Q8TCT9	377 aa		12.67	□□□□□ -0.38
SNHG17-208	ENST00000456953	C14orf79	Q96F83	325 aa		12.67	□□□□□ -0.38
SNHG17-208	ENST00000456953	RBM41	Q96IZ5	413 aa	Known RBP	12.67	□□□□□ -0.38
SNHG17-208	ENST00000456953	THOC3	Q96J01	351 aa	Known RBP	12.67	□□□□□ -0.38
SNHG17-208	ENST00000456953	VPS50	Q96JG6	964 aa		12.67	□□□□□ -0.38
SNHG17-208	ENST00000456953	TAAR6	Q96RI8	345 aa		12.67	□□□□□ -0.38
SNHG17-208	ENST00000456953	MVB12B	Q9H7P6	319 aa		12.67	□□□□□ -0.38
SNHG17-208	ENST00000456953	GLOD4	Q9HC38	313 aa		12.67	□□□□□ -0.38
SNHG17-208	ENST00000456953	SLC22A11	Q9NSA0	550 aa		12.67	□□□□□ -0.38
SNHG17-208	ENST00000456953	HEY1	Q9Y5J3	304 aa		12.67	□□□□□ -0.38
SNHG17-208	ENST00000456953	TRAV17	A0A0B4J275	112 aa		12.66	□□□□□ -0.38
SNHG17-208	ENST00000456953	LOC285095	A0A1B0GVY8	99 aa		12.66	□□□□□ -0.38
SNHG17-208	ENST00000456953	MIF4GD	A9UHW6	222 aa	Known RBP	12.66	□□□□□ -0.38
SNHG17-208	ENST00000456953	IFRD1	O00458	451 aa	Predicted RBP	12.66	□□□□□ -0.38
SNHG17-208	ENST00000456953	PSTPIP1	O43586	416 aa		12.66	□□□□□ -0.38
SNHG17-208	ENST00000456953	UNC5C	O95185	931 aa		12.66	□□□□□ -0.38
SNHG17-208	ENST00000456953	PRAMEF1	O95521	474 aa		12.66	□□□□□ -0.38
SNHG17-208	ENST00000456953	EPO	P01588	193 aa		12.66	□□□□□ -0.38
SNHG17-208	ENST00000456953	ALB	P02768	609 aa		12.66	□□□□□ -0.38
SNHG17-208	ENST00000456953	KRT1	P04264	644 aa		12.66	□□□□□ -0.38
SNHG17-208	ENST00000456953	CD1E	P15812	388 aa		12.66	□□□□□ -0.38
SNHG17-208	ENST00000456953	TNNT3	P45378	269 aa	Predicted RBP	12.66	□□□□□ -0.38
SNHG17-208	ENST00000456953	PDK1	Q15118	436 aa		12.66	□□□□□ -0.38
SNHG17-208	ENST00000456953	NOMO1	Q15155	1222 aa		12.66	□□□□□ -0.38
SNHG17-208	ENST00000456953	ZIC1	Q15915	447 aa		12.66	□□□□□ -0.38
SNHG17-208	ENST00000456953	SIRPB2	Q5JXA9	342 aa		12.66	□□□□□ -0.38
SNHG17-208	ENST00000456953	OVCH1	Q7RTY7	1134 aa		12.66	□□□□□ -0.38
SNHG17-208	ENST00000456953	GLT6D1	Q7Z4J2	308 aa		12.66	□□□□□ -0.38
SNHG17-208	ENST00000456953	TRIM73	Q86UV7	250 aa		12.66	□□□□□ -0.38
SNHG17-208	ENST00000456953	ZNF398	Q8TD17	642 aa		12.66	□□□□□ -0.38
SNHG17-208	ENST00000456953	RNF157	Q96PX1	679 aa		12.66	□□□□□ -0.38
SNHG17-208	ENST00000456953	NRTN	Q99748	197 aa		12.66	□□□□□ -0.38
SNHG17-208	ENST00000456953	IRAK4	Q9NWZ3	460 aa		12.66	□□□□□ -0.38
SNHG17-208	ENST00000456953	DDX56	Q9NY93	547 aa	Known RBP	12.66	□□□□□ -0.38
SNHG17-208	ENST00000456953	UBP1	Q9NZI7	540 aa		12.66	□□□□□ -0.38
SNHG17-208	ENST00000456953	C17orf113	A0A1B0GUU1	675 aa		12.65	□□□□□ -0.38
SNHG17-208	ENST00000456953	DYTN	A2CJ06	578 aa		12.65	□□□□□ -0.38
SNHG17-208	ENST00000456953	LRRD1	A4D1F6	860 aa		12.65	□□□□□ -0.38
SNHG17-208	ENST00000456953	PPP1R12A	O14974	1030 aa	Predicted RBP	12.65	□□□□□ -0.38
SNHG17-208	ENST00000456953	SGTA	O43765	313 aa		12.65	□□□□□ -0.38
SNHG17-208	ENST00000456953	KLHL18	O94889	574 aa		12.65	□□□□□ -0.38
SNHG17-208	ENST00000456953	CTSB	P07858	339 aa		12.65	□□□□□ -0.38
SNHG17-208	ENST00000456953	PIM1	P11309	404 aa	Predicted RBP	12.65	□□□□□ -0.38

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