RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 CYP4F3Q08477 520 aa27.11■■□□□ 1.93
SMARCC1-203ENST00000454240 EEF1AKMT2Q5JPI9 291 aaKnown RBP27.11■■□□□ 1.93
SMARCC1-203ENST00000454240 CACHD1Q5VU97 1274 aa27.11■■□□□ 1.93
SMARCC1-203ENST00000454240 FOXR1Q6PIV2 292 aa27.11■■□□□ 1.93
SMARCC1-203ENST00000454240 TMEM207Q6UWW9 146 aa27.11■■□□□ 1.93
SMARCC1-203ENST00000454240 LSMEM2Q8N112 164 aa27.11■■□□□ 1.93
SMARCC1-203ENST00000454240 FBXO15Q8NCQ5 510 aaPredicted RBP27.11■■□□□ 1.93
SMARCC1-203ENST00000454240 SLC46A1Q96NT5 459 aa27.11■■□□□ 1.93
SMARCC1-203ENST00000454240 MAP3K3Q99759 626 aa27.11■■□□□ 1.93
SMARCC1-203ENST00000454240 TXLNGYQ9BZA5 131 aa27.11■■□□□ 1.93
SMARCC1-203ENST00000454240 ZNF768Q9H5H4 540 aaKnown RBP27.11■■□□□ 1.93
SMARCC1-203ENST00000454240 TLCD2A6NGC4 264 aa27.1■■□□□ 1.93
SMARCC1-203ENST00000454240 C2orf74A8MZ97 194 aa27.1■■□□□ 1.93
SMARCC1-203ENST00000454240 RASGRF2O14827 1237 aa27.1■■□□□ 1.93
SMARCC1-203ENST00000454240 BRINP1O60477 761 aa27.1■■□□□ 1.93
SMARCC1-203ENST00000454240 RASSF9O75901 435 aa27.1■■□□□ 1.93
SMARCC1-203ENST00000454240 CHRM5P08912 532 aaPredicted RBP27.1■■□□□ 1.93
SMARCC1-203ENST00000454240 MYBL2P10244 700 aa27.1■■□□□ 1.93
SMARCC1-203ENST00000454240 ITIH1P19827 911 aa27.1■■□□□ 1.93
SMARCC1-203ENST00000454240 PRDX3P30048 256 aaKnown RBP27.1■■□□□ 1.93
SMARCC1-203ENST00000454240 CEP97Q8IW35 865 aa27.1■■□□□ 1.93
SMARCC1-203ENST00000454240 CARFQ8N187 725 aa27.1■■□□□ 1.93
SMARCC1-203ENST00000454240 LINC01555Q8NAE3 123 aa27.1■■□□□ 1.93
SMARCC1-203ENST00000454240 MDM1Q8TC05 714 aa27.1■■□□□ 1.93
SMARCC1-203ENST00000454240 UBXN4Q92575 508 aa27.1■■□□□ 1.93
SMARCC1-203ENST00000454240 LINGO1Q96FE5 620 aa27.1■■□□□ 1.93
SMARCC1-203ENST00000454240 IL17FQ96PD4 163 aa27.1■■□□□ 1.93
SMARCC1-203ENST00000454240 POPDC3Q9HBV1 291 aa27.1■■□□□ 1.93
SMARCC1-203ENST00000454240 ACTR10Q9NZ32 417 aa27.1■■□□□ 1.93
SMARCC1-203ENST00000454240 SLC39A10Q9ULF5 831 aa27.1■■□□□ 1.93
SMARCC1-203ENST00000454240 PCM1Q15154 2024 aa27.1■■□□□ 1.93
SMARCC1-203ENST00000454240 ANKRD12Q6UB98 2062 aa27.09■■□□□ 1.93
SMARCC1-203ENST00000454240 IGHV5-51A0A0C4DH38 117 aa27.09■■□□□ 1.93
SMARCC1-203ENST00000454240 PIPSLA2A3N6 862 aa27.09■■□□□ 1.93
SMARCC1-203ENST00000454240 GSAPA4D1B5 854 aa27.09■■□□□ 1.93
SMARCC1-203ENST00000454240 SNRNP200O75643 2136 aaKnown RBP27.09■■□□□ 1.93
SMARCC1-203ENST00000454240 JMJD7P0C870 316 aa27.09■■□□□ 1.93
SMARCC1-203ENST00000454240 FGF3P11487 239 aaPredicted RBP27.09■■□□□ 1.93
SMARCC1-203ENST00000454240 CCL4P13236 92 aa27.09■■□□□ 1.93
SMARCC1-203ENST00000454240 ZNF37AP17032 561 aaPredicted RBP27.09■■□□□ 1.93
SMARCC1-203ENST00000454240 ETV5P41161 510 aa27.09■■□□□ 1.93
SMARCC1-203ENST00000454240 MLLT3P42568 568 aaPredicted RBP27.09■■□□□ 1.93
SMARCC1-203ENST00000454240 TRMT10CQ7L0Y3 403 aaKnown RBP27.09■■□□□ 1.93
SMARCC1-203ENST00000454240 GSPT2Q8IYD1 628 aaKnown RBP27.09■■□□□ 1.93
SMARCC1-203ENST00000454240 MYO1HQ8N1T3 1032 aa27.09■■□□□ 1.93
SMARCC1-203ENST00000454240 BMPERQ8N8U9 685 aa27.09■■□□□ 1.93
SMARCC1-203ENST00000454240 OR9A1PQ8NGU1 263 aa27.09■■□□□ 1.93
SMARCC1-203ENST00000454240 OR2L8Q8NGY9 312 aa27.09■■□□□ 1.93
SMARCC1-203ENST00000454240 DENND1AQ8TEH3 1009 aa27.09■■□□□ 1.93
SMARCC1-203ENST00000454240 PDLIM5Q96HC4 596 aaKnown RBP27.09■■□□□ 1.93
SMARCC1-203ENST00000454240 RAB11FIP5Q9BXF6 653 aa27.09■■□□□ 1.93
SMARCC1-203ENST00000454240 CCDC86Q9H6F5 360 aaKnown RBP27.09■■□□□ 1.93
SMARCC1-203ENST00000454240 ASCL3Q9NQ33 180 aa27.09■■□□□ 1.93
SMARCC1-203ENST00000454240 OCIAD1Q9NX40 245 aa27.09■■□□□ 1.93
SMARCC1-203ENST00000454240 SPHK1Q9NYA1 384 aa27.09■■□□□ 1.93
SMARCC1-203ENST00000454240 PISDQ9UG56 409 aa27.09■■□□□ 1.93
SMARCC1-203ENST00000454240 FREM2Q5SZK8 3169 aa27.09■■□□□ 1.93
SMARCC1-203ENST00000454240 KRT87PA6NCN2 255 aa27.08■■□□□ 1.93
SMARCC1-203ENST00000454240 MYO1CO00159 1063 aa27.08■■□□□ 1.93
SMARCC1-203ENST00000454240 ZBTB14O43829 449 aa27.08■■□□□ 1.93
SMARCC1-203ENST00000454240 TNFSF15O95150 251 aa27.08■■□□□ 1.93
SMARCC1-203ENST00000454240 ITGA2BP08514 1039 aa27.08■■□□□ 1.93
SMARCC1-203ENST00000454240 SEPHS1P49903 392 aa27.08■■□□□ 1.93
SMARCC1-203ENST00000454240 FLVCR1-AS1Q8TAF5 88 aa27.08■■□□□ 1.93
SMARCC1-203ENST00000454240 HMGCLL1Q8TB92 370 aa27.08■■□□□ 1.93
SMARCC1-203ENST00000454240 SLC41A2Q96JW4 573 aa27.08■■□□□ 1.93
SMARCC1-203ENST00000454240 PPM1MQ96MI6 270 aa27.08■■□□□ 1.93
SMARCC1-203ENST00000454240 OR2A14Q96R47 310 aa27.08■■□□□ 1.93
SMARCC1-203ENST00000454240 SYTL2Q9HCH5 934 aa27.08■■□□□ 1.93
SMARCC1-203ENST00000454240 C1GALT1Q9NS00 363 aa27.08■■□□□ 1.93
SMARCC1-203ENST00000454240 SPATA7Q9P0W8 599 aa27.08■■□□□ 1.93
SMARCC1-203ENST00000454240 EFCAB7A8K855 629 aa27.07■■□□□ 1.92
SMARCC1-203ENST00000454240 B4E171 279 aa27.07■■□□□ 1.92
SMARCC1-203ENST00000454240 WISP3O95389 354 aaPredicted RBP27.07■■□□□ 1.92
SMARCC1-203ENST00000454240 C8GP07360 202 aa27.07■■□□□ 1.92
SMARCC1-203ENST00000454240 NELFEP18615 380 aaKnown RBP27.07■■□□□ 1.92
SMARCC1-203ENST00000454240 RBMS1P29558 406 aaKnown RBP27.07■■□□□ 1.92
SMARCC1-203ENST00000454240 PEBP1P30086 187 aaKnown RBP27.07■■□□□ 1.92
SMARCC1-203ENST00000454240 TSPAN7P41732 249 aa27.07■■□□□ 1.92
SMARCC1-203ENST00000454240 PMS2P54278 862 aa27.07■■□□□ 1.92
SMARCC1-203ENST00000454240 ZNF460Q14592 562 aa27.07■■□□□ 1.92
SMARCC1-203ENST00000454240 USP10Q14694 798 aaKnown RBP27.07■■□□□ 1.92
SMARCC1-203ENST00000454240 KIR2DS3Q14952 304 aa27.07■■□□□ 1.92
SMARCC1-203ENST00000454240 UBE2R2Q712K3 238 aaPredicted RBP27.07■■□□□ 1.92
SMARCC1-203ENST00000454240 KMT5CQ86Y97 462 aa27.07■■□□□ 1.92
SMARCC1-203ENST00000454240 RAB42Q8N4Z0 105 aa27.07■■□□□ 1.92
SMARCC1-203ENST00000454240 LMNTD1Q8N9Z9 388 aa27.07■■□□□ 1.92
SMARCC1-203ENST00000454240 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP27.07■■□□□ 1.92
SMARCC1-203ENST00000454240 DLG3Q92796 817 aa27.07■■□□□ 1.92
SMARCC1-203ENST00000454240 PKP4Q99569 1192 aa27.07■■□□□ 1.92
SMARCC1-203ENST00000454240 PITPNM3Q9BZ71 974 aa27.07■■□□□ 1.92
SMARCC1-203ENST00000454240 CAB39LQ9H9S4 337 aa27.07■■□□□ 1.92
SMARCC1-203ENST00000454240 SIDT1Q9NXL6 827 aaKnown RBP27.07■■□□□ 1.92
SMARCC1-203ENST00000454240 ADAMTS6Q9UKP5 1117 aa27.07■■□□□ 1.92
SMARCC1-203ENST00000454240 A0A087WUV0 522 aaPredicted RBP27.06■■□□□ 1.92
SMARCC1-203ENST00000454240 CDRT15L2A8MXV6 281 aa27.06■■□□□ 1.92
SMARCC1-203ENST00000454240 SLC16A5O15375 505 aa27.06■■□□□ 1.92
SMARCC1-203ENST00000454240 ABHD2P08910 425 aa27.06■■□□□ 1.92
SMARCC1-203ENST00000454240 ERGP11308 486 aa27.06■■□□□ 1.92
SMARCC1-203ENST00000454240 UGT2B7P16662 529 aa27.06■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms