RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 B3GNT4Q9C0J1 378 aa19.34■□□□□ 0.69
COL9A3-202ENST00000452372 ZNF768Q9H5H4 540 aaKnown RBP19.34■□□□□ 0.69
COL9A3-202ENST00000452372 XKR8Q9H6D3 395 aa19.34■□□□□ 0.69
COL9A3-202ENST00000452372 CORO1CQ9ULV4 474 aaPredicted RBP19.34■□□□□ 0.69
COL9A3-202ENST00000452372 NFS1Q9Y697 457 aa19.34■□□□□ 0.69
COL9A3-202ENST00000452372 EFCAB7A8K855 629 aa19.33■□□□□ 0.68
COL9A3-202ENST00000452372 NVLO15381 856 aaKnown RBP19.33■□□□□ 0.68
COL9A3-202ENST00000452372 C1orf105O95561 183 aa19.33■□□□□ 0.68
COL9A3-202ENST00000452372 CBSLP0DN79 551 aa19.33■□□□□ 0.68
COL9A3-202ENST00000452372 CBSP35520 551 aa19.33■□□□□ 0.68
COL9A3-202ENST00000452372 MAPK10P53779 464 aa19.33■□□□□ 0.68
COL9A3-202ENST00000452372 GPX6P59796 221 aa19.33■□□□□ 0.68
COL9A3-202ENST00000452372 TIAL1Q01085 375 aaKnown RBP eCLIP19.33■□□□□ 0.68
COL9A3-202ENST00000452372 VAC14Q08AM6 782 aa19.33■□□□□ 0.68
COL9A3-202ENST00000452372 GRB7Q14451 532 aa19.33■□□□□ 0.68
COL9A3-202ENST00000452372 KYNUQ16719 465 aa19.33■□□□□ 0.68
COL9A3-202ENST00000452372 KLHL38Q2WGJ6 581 aa19.33■□□□□ 0.68
COL9A3-202ENST00000452372 RBM20Q5T481 1227 aaKnown RBP19.33■□□□□ 0.68
COL9A3-202ENST00000452372 UGT3A1Q6NUS8 523 aa19.33■□□□□ 0.68
COL9A3-202ENST00000452372 TTC23LQ6PF05 361 aa19.33■□□□□ 0.68
COL9A3-202ENST00000452372 NEK10Q6ZWH5 1172 aa19.33■□□□□ 0.68
COL9A3-202ENST00000452372 CARFQ8N187 725 aa19.33■□□□□ 0.68
COL9A3-202ENST00000452372 BMPERQ8N8U9 685 aa19.33■□□□□ 0.68
COL9A3-202ENST00000452372 CD200R1Q8TD46 325 aa19.33■□□□□ 0.68
COL9A3-202ENST00000452372 UBXN4Q92575 508 aa19.33■□□□□ 0.68
COL9A3-202ENST00000452372 TTC9Q92623 222 aa19.33■□□□□ 0.68
COL9A3-202ENST00000452372 RAD51AP1Q96B01 352 aa19.33■□□□□ 0.68
COL9A3-202ENST00000452372 MAP3K3Q99759 626 aa19.33■□□□□ 0.68
COL9A3-202ENST00000452372 NSMCE4AQ9NXX6 385 aa19.33■□□□□ 0.68
COL9A3-202ENST00000452372 TAS2R13Q9NYV9 303 aa19.33■□□□□ 0.68
COL9A3-202ENST00000452372 OR6C2Q9NZP2 312 aa19.33■□□□□ 0.68
COL9A3-202ENST00000452372 PSAT1Q9Y617 370 aa19.33■□□□□ 0.68
COL9A3-202ENST00000452372 TCRBV9S1A1TA0A576 114 aa19.32■□□□□ 0.68
COL9A3-202ENST00000452372 TLCD2A6NGC4 264 aa19.32■□□□□ 0.68
COL9A3-202ENST00000452372 K7ENP7 123 aa19.32■□□□□ 0.68
COL9A3-202ENST00000452372 ERVH48-1M5A8F1 160 aa19.32■□□□□ 0.68
COL9A3-202ENST00000452372 BTN3A1O00481 513 aa19.32■□□□□ 0.68
COL9A3-202ENST00000452372 ENO3P13929 434 aaPredicted RBP19.32■□□□□ 0.68
COL9A3-202ENST00000452372 SLC5A2P31639 672 aa19.32■□□□□ 0.68
COL9A3-202ENST00000452372 CCNFP41002 786 aa19.32■□□□□ 0.68
COL9A3-202ENST00000452372 SEPHS1P49903 392 aa19.32■□□□□ 0.68
COL9A3-202ENST00000452372 KPNA2P52292 529 aaKnown RBP19.32■□□□□ 0.68
COL9A3-202ENST00000452372 MC2RQ01718 297 aa19.32■□□□□ 0.68
COL9A3-202ENST00000452372 TMEM164Q5U3C3 297 aa19.32■□□□□ 0.68
COL9A3-202ENST00000452372 INO80CQ6PI98 192 aaPredicted RBP19.32■□□□□ 0.68
COL9A3-202ENST00000452372 STRA8Q7Z7C7 330 aa19.32■□□□□ 0.68
COL9A3-202ENST00000452372 FAM129CQ86XR2 697 aa19.32■□□□□ 0.68
COL9A3-202ENST00000452372 USP7Q93009 1102 aa19.32■□□□□ 0.68
COL9A3-202ENST00000452372 TAAR9Q96RI9 348 aa19.32■□□□□ 0.68
COL9A3-202ENST00000452372 MENTQ9BUN1 341 aa19.32■□□□□ 0.68
COL9A3-202ENST00000452372 TWSG1Q9GZX9 223 aa19.32■□□□□ 0.68
COL9A3-202ENST00000452372 L2HGDHQ9H9P8 463 aa19.32■□□□□ 0.68
COL9A3-202ENST00000452372 LRRC4CQ9HCJ2 640 aa19.32■□□□□ 0.68
COL9A3-202ENST00000452372 FBXO8Q9NRD0 319 aa19.32■□□□□ 0.68
COL9A3-202ENST00000452372 SMYD2Q9NRG4 433 aa19.32■□□□□ 0.68
COL9A3-202ENST00000452372 MTRF1LQ9UGC7 380 aaKnown RBP19.32■□□□□ 0.68
COL9A3-202ENST00000452372 TRMT6Q9UJA5 497 aaKnown RBP19.32■□□□□ 0.68
COL9A3-202ENST00000452372 POMT2Q9UKY4 750 aa19.32■□□□□ 0.68
COL9A3-202ENST00000452372 PLAGL1Q9UM63 463 aa19.32■□□□□ 0.68
COL9A3-202ENST00000452372 RUVBL2Q9Y230 463 aaKnown RBP19.32■□□□□ 0.68
COL9A3-202ENST00000452372 VWA7Q9Y334 891 aa19.32■□□□□ 0.68
COL9A3-202ENST00000452372 PCDHGA3Q9Y5H0 932 aa19.32■□□□□ 0.68
COL9A3-202ENST00000452372 IGHV5-51A0A0C4DH38 117 aa19.31■□□□□ 0.68
COL9A3-202ENST00000452372 GSAPA4D1B5 854 aa19.31■□□□□ 0.68
COL9A3-202ENST00000452372 C2orf74A8MZ97 194 aa19.31■□□□□ 0.68
COL9A3-202ENST00000452372 EIF3FO00303 357 aaPredicted RBP19.31■□□□□ 0.68
COL9A3-202ENST00000452372 MPC1LP0DKB6 136 aa19.31■□□□□ 0.68
COL9A3-202ENST00000452372 NELFEP18615 380 aaKnown RBP19.31■□□□□ 0.68
COL9A3-202ENST00000452372 PRDX3P30048 256 aaKnown RBP19.31■□□□□ 0.68
COL9A3-202ENST00000452372 RAB28P51157 221 aa19.31■□□□□ 0.68
COL9A3-202ENST00000452372 CDKN2DP55273 166 aa19.31■□□□□ 0.68
COL9A3-202ENST00000452372 RHDQ02161 417 aa19.31■□□□□ 0.68
COL9A3-202ENST00000452372 CUL1Q13616 776 aa19.31■□□□□ 0.68
COL9A3-202ENST00000452372 HECTD2Q5U5R9 776 aa19.31■□□□□ 0.68
COL9A3-202ENST00000452372 CYHR1Q6ZMK1 362 aa19.31■□□□□ 0.68
COL9A3-202ENST00000452372 CEP128Q6ZU80 1094 aa19.31■□□□□ 0.68
COL9A3-202ENST00000452372 KMT5CQ86Y97 462 aa19.31■□□□□ 0.68
COL9A3-202ENST00000452372 MAGEC3Q8TD91 643 aa19.31■□□□□ 0.68
COL9A3-202ENST00000452372 IFT81Q8WYA0 676 aa19.31■□□□□ 0.68
COL9A3-202ENST00000452372 CDKL2Q92772 493 aa19.31■□□□□ 0.68
COL9A3-202ENST00000452372 WBP1Q96G27 269 aa19.31■□□□□ 0.68
COL9A3-202ENST00000452372 SLC41A2Q96JW4 573 aa19.31■□□□□ 0.68
COL9A3-202ENST00000452372 TSPYL1Q9H0U9 437 aa19.31■□□□□ 0.68
COL9A3-202ENST00000452372 SIDT1Q9NXL6 827 aaKnown RBP19.31■□□□□ 0.68
COL9A3-202ENST00000452372 SLC39A1Q9NY26 324 aa19.31■□□□□ 0.68
COL9A3-202ENST00000452372 TSR3Q9UJK0 312 aaKnown RBP19.31■□□□□ 0.68
COL9A3-202ENST00000452372 ACSL6Q9UKU0 697 aa19.31■□□□□ 0.68
COL9A3-202ENST00000452372 FLNBO75369 2602 aaKnown RBP19.31■□□□□ 0.68
COL9A3-202ENST00000452372 PIPSLA2A3N6 862 aa19.3■□□□□ 0.68
COL9A3-202ENST00000452372 FAM159BA6NKW6 160 aa19.3■□□□□ 0.68
COL9A3-202ENST00000452372 C9orf172C9J069 976 aa19.3■□□□□ 0.68
COL9A3-202ENST00000452372 ZNF500O60304 480 aaPredicted RBP19.3■□□□□ 0.68
COL9A3-202ENST00000452372 PRAMEF10O60809 474 aa19.3■□□□□ 0.68
COL9A3-202ENST00000452372 PSIP1O75475 530 aaKnown RBP19.3■□□□□ 0.68
COL9A3-202ENST00000452372 SPAG6O75602 509 aa19.3■□□□□ 0.68
COL9A3-202ENST00000452372 C1QAP02745 245 aa19.3■□□□□ 0.68
COL9A3-202ENST00000452372 MCM3P25205 808 aa19.3■□□□□ 0.68
COL9A3-202ENST00000452372 PKLRP30613 574 aa19.3■□□□□ 0.68
COL9A3-202ENST00000452372 RAB15P59190 212 aa19.3■□□□□ 0.68
COL9A3-202ENST00000452372 ILF2Q12905 390 aaKnown RBP19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms