RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 RGS11O94810 467 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 PGLSO95336 258 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 SGPL1O95470 568 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 BMP3P12645 472 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 JUPP14923 745 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 FPR1P21462 350 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 PPP2R1BP30154 601 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 MAPK9P45984 424 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 POLR2JP52435 117 aaKnown RBP2.17□□□□□ -2.06
USP53-202ENST00000450251 PLA2G16P53816 162 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 ARSFP54793 590 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 RAP2BP61225 183 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 SKP1P63208 163 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 RPL6Q02878 288 aaKnown RBP2.17□□□□□ -2.06
USP53-202ENST00000450251 TWF1Q12792 350 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 SEMA3BQ13214 749 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 RIN1Q13671 783 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 BMPR2Q13873 1038 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 IDI1Q13907 227 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 NR6A1Q15406 480 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 GRK1Q15835 563 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 FAM189A2Q15884 450 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 SNRNP35Q16560 246 aaKnown RBP2.17□□□□□ -2.06
USP53-202ENST00000450251 PFKFB4Q16877 469 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 IQCCQ4KMZ1 466 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 ZNF484Q5JVG2 852 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 HYIQ5T013 277 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 FBXL19Q6PCT2 694 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 AHSA2Q719I0 299 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 PID1Q7Z2X4 250 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 FAM220AQ7Z4H9 259 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 CD163Q86VB7 1156 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 ABRAQ8N0Z2 381 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 RYBPQ8N488 228 aaPredicted RBP2.17□□□□□ -2.06
USP53-202ENST00000450251 OR52K1Q8NGK4 314 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 OR2L8Q8NGY9 312 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 RPLP0P6Q8NHW5 317 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 COQ8AQ8NI60 647 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 DNAJB14Q8TBM8 379 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 TNFAIP8L1Q8WVP5 186 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 CPNE4Q96A23 557 aaPredicted RBP2.17□□□□□ -2.06
USP53-202ENST00000450251 ACDQ96AP0 544 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 ZNF496Q96IT1 587 aaPredicted RBP2.17□□□□□ -2.06
USP53-202ENST00000450251 FCRL1Q96LA6 429 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 MED18Q9BUE0 208 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 ACE2Q9BYF1 805 aaPredicted RBP2.17□□□□□ -2.06
USP53-202ENST00000450251 B3GNT5Q9BYG0 378 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 SLC39A8Q9C0K1 460 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 LHPPQ9H008 270 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 TNKS2Q9H2K2 1166 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 ADAM7Q9H2U9 754 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 PCIF1Q9H4Z3 704 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 LIN28AQ9H9Z2 209 aaKnown RBP2.17□□□□□ -2.06
USP53-202ENST00000450251 STARD7Q9NQZ5 370 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 NUDT15Q9NV35 164 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 TMEM248Q9NWD8 314 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 PTGFRNQ9P2B2 879 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 PCDH10Q9P2E7 1040 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 FBXL4Q9UKA2 621 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 DNPEPQ9ULA0 475 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 PPIEQ9UNP9 301 aaKnown RBP2.17□□□□□ -2.06
USP53-202ENST00000450251 TRAPPC4Q9Y296 219 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 BTRCQ9Y297 605 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 PTCH2Q9Y6C5 1203 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 XIRP1Q702N8 1843 aaKnown RBP2.17□□□□□ -2.06
USP53-202ENST00000450251 A0A1W2PPL8 197 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 hCG_1642624A0A1W2PR95 340 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 FAM221BA6H8Z2 402 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 F5H6K3 240 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 SLC1A7O00341 560 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 LYRM1O43325 122 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 SMAD6O43541 496 aaKnown RBP2.16□□□□□ -2.06
USP53-202ENST00000450251 B4GALT4O60513 344 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 ADAM23O75077 832 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 NIPSNAP2O75323 286 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 UPP2O95045 317 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 RAB36O95755 333 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 IFNA2P01563 188 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 RLN2P04090 185 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 HRGP04196 525 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 CYP4B1P13584 511 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 DPEP1P16444 411 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 ZNF37AP17032 561 aaPredicted RBP2.16□□□□□ -2.06
USP53-202ENST00000450251 FUT4P22083 530 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 KLRC2P26717 231 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 CHATP28329 748 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 RBMS1P29558 406 aaKnown RBP2.16□□□□□ -2.06
USP53-202ENST00000450251 SERPINF1P36955 418 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 OMPP47874 163 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 SRP9P49458 86 aaKnown RBP2.16□□□□□ -2.06
USP53-202ENST00000450251 TGFB2P61812 414 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 RRAS2P62070 204 aaPredicted RBP2.16□□□□□ -2.06
USP53-202ENST00000450251 RAB1AP62820 205 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 ERVK-25P63136 954 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 OGDHQ02218 1023 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 EN1Q05925 392 aaPredicted RBP2.16□□□□□ -2.06
USP53-202ENST00000450251 BTN1A1Q13410 526 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 CARTPTQ16568 116 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 DPY19L1Q2PZI1 675 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 TTLL9Q3SXZ7 439 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms