RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 RPRD1BQ9NQG5 326 aaKnown RBP3.56□□□□□ -1.84
HMGB3P8-201ENST00000449709 SLC35C2Q9NQQ7 365 aa3.56□□□□□ -1.84
HMGB3P8-201ENST00000449709 FBXO6Q9NRD1 293 aaPredicted RBP3.56□□□□□ -1.84
HMGB3P8-201ENST00000449709 POLR3BQ9NW08 1133 aaPredicted RBP3.56□□□□□ -1.84
HMGB3P8-201ENST00000449709 ADPRHL2Q9NX46 363 aa3.56□□□□□ -1.84
HMGB3P8-201ENST00000449709 FBXL12Q9NXK8 326 aa3.56□□□□□ -1.84
HMGB3P8-201ENST00000449709 MCM9Q9NXL9 1143 aa3.56□□□□□ -1.84
HMGB3P8-201ENST00000449709 NINJ2Q9NZG7 142 aa3.56□□□□□ -1.84
HMGB3P8-201ENST00000449709 MAT2BQ9NZL9 334 aa3.56□□□□□ -1.84
HMGB3P8-201ENST00000449709 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.56□□□□□ -1.84
HMGB3P8-201ENST00000449709 SAE1Q9UBE0 346 aaPredicted RBP3.56□□□□□ -1.84
HMGB3P8-201ENST00000449709 CPA4Q9UI42 421 aa3.56□□□□□ -1.84
HMGB3P8-201ENST00000449709 TRMT6Q9UJA5 497 aaKnown RBP3.56□□□□□ -1.84
HMGB3P8-201ENST00000449709 ZNF112Q9UJU3 913 aa3.56□□□□□ -1.84
HMGB3P8-201ENST00000449709 GJD2Q9UKL4 321 aa3.56□□□□□ -1.84
HMGB3P8-201ENST00000449709 RAB23Q9ULC3 237 aa3.56□□□□□ -1.84
HMGB3P8-201ENST00000449709 PCDHA6Q9UN73 950 aa3.56□□□□□ -1.84
HMGB3P8-201ENST00000449709 MAGED2Q9UNF1 606 aaPredicted RBP3.56□□□□□ -1.84
HMGB3P8-201ENST00000449709 PLA2G2DQ9UNK4 145 aa3.56□□□□□ -1.84
HMGB3P8-201ENST00000449709 LIPT1Q9Y234 373 aa3.56□□□□□ -1.84
HMGB3P8-201ENST00000449709 YBX2Q9Y2T7 364 aaKnown RBP3.56□□□□□ -1.84
HMGB3P8-201ENST00000449709 NR2E1Q9Y466 385 aa3.56□□□□□ -1.84
HMGB3P8-201ENST00000449709 PCDHA1Q9Y5I3 950 aa3.56□□□□□ -1.84
HMGB3P8-201ENST00000449709 COPG1Q9Y678 874 aaKnown RBP3.56□□□□□ -1.84
HMGB3P8-201ENST00000449709 A2ML1A8K2U0 1454 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 CROCCQ5TZA2 2017 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 LOC100653049A0A140TA62 436 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 A0A1W2PRG6 482 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 MROH6A6NGR9 719 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 PCP4L1A6NKN8 68 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 ZNF729A6NN14 1252 aaPredicted RBP3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 MPTX1A8MV57 137 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 PRR5-ARHGAP8B1AHC4 643 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 E7EWF7 191 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 L7N2F9 121 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 WRBO00258 174 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 COPEO14579 308 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 ZNF213O14771 459 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 PPEF2O14830 753 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 TFECO14948 347 aaPredicted RBP3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 ZBTB5O15062 677 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 KIAA0355O15063 1070 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 SEC14L5O43304 696 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 ENTPD3O75355 529 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 KRT34O76011 436 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 NOL4O94818 638 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 RASAL1O95294 804 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 TOP3BO95985 862 aaKnown RBP3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 DHFRP00374 187 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 IFNGP01579 166 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 CRYABP02511 175 aaKnown RBP3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 MMP1P03956 469 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 KRT1P04264 644 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 GLAP06280 429 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 RB1P06400 928 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 CDK1P06493 297 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 FBP1P09467 338 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 FTH1P19P0C7X4 201 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 GAAP10253 952 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 RRASP10301 218 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 CYP2A6P11509 494 aaPredicted RBP3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 PSKH1P11801 424 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 CKBP12277 381 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 IL7P13232 177 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 GNSP15586 552 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 VEGFAP15692 232 aaPredicted RBP3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 CBR1P16152 277 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 HK1P19367 917 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 ITGALP20701 1170 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 FGFR2P21802 821 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 MATN1P21941 496 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 FGFR4P22455 802 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 KELP23276 732 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 PRDX5P30044 214 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 ADSSP30520 456 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 UQCRC1P31930 480 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 SREBF1P36956 1147 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 MAGEA4P43358 317 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 GSTM5P46439 218 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 SLCO1A2P46721 670 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 YAP1P46937 504 aaKnown RBP3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 ATP5OP48047 213 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 GLRBP48167 497 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 RIDAP52758 137 aaKnown RBP3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 ITGA8P53708 1063 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 ARL4CP56559 192 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 CSNK2BP67870 215 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 GAD2Q05329 585 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 SF3A3Q12874 501 aaKnown RBP eCLIP3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 ABRQ12979 859 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 DMP1Q13316 513 aaPredicted RBP3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 PPIL2Q13356 520 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 PLD1Q13393 1074 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 TOMM20Q15388 145 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 SLC1A5Q15758 541 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 CTF1Q16619 201 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 SMTNL2Q2TAL5 461 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 MGAT5BQ3V5L5 792 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 GPR33Q49SQ1 333 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 FLYWCH1Q4VC44 716 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms