RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 CTSCP53634 463 aa12.06□□□□□ -0.48
AC004540.1-204ENST00000449537 TMPRSS15P98073 1019 aa12.06□□□□□ -0.48
AC004540.1-204ENST00000449537 OGDHQ02218 1023 aa12.06□□□□□ -0.48
AC004540.1-204ENST00000449537 NIPAL4Q0D2K0 466 aa12.06□□□□□ -0.48
AC004540.1-204ENST00000449537 ATP13A5Q4VNC0 1218 aa12.06□□□□□ -0.48
AC004540.1-204ENST00000449537 CEP128Q6ZU80 1094 aa12.06□□□□□ -0.48
AC004540.1-204ENST00000449537 LRRC49Q8IUZ0 686 aa12.06□□□□□ -0.48
AC004540.1-204ENST00000449537 PSTKQ8IV42 348 aaKnown RBP12.06□□□□□ -0.48
AC004540.1-204ENST00000449537 NEK11Q8NG66 645 aa12.06□□□□□ -0.48
AC004540.1-204ENST00000449537 GOT1L1Q8NHS2 421 aaPredicted RBP12.06□□□□□ -0.48
AC004540.1-204ENST00000449537 DENND1AQ8TEH3 1009 aa12.06□□□□□ -0.48
AC004540.1-204ENST00000449537 DLG3Q92796 817 aa12.06□□□□□ -0.48
AC004540.1-204ENST00000449537 PEBP4Q96S96 227 aa12.06□□□□□ -0.48
AC004540.1-204ENST00000449537 PCDHB18PQ96TA0 734 aa12.06□□□□□ -0.48
AC004540.1-204ENST00000449537 GPR63Q9BZJ6 419 aa12.06□□□□□ -0.48
AC004540.1-204ENST00000449537 ZCCHC2Q9C0B9 1178 aaKnown RBP12.06□□□□□ -0.48
AC004540.1-204ENST00000449537 CLEC4MQ9H2X3 399 aaPredicted RBP12.06□□□□□ -0.48
AC004540.1-204ENST00000449537 IL17CQ9P0M4 197 aa12.06□□□□□ -0.48
AC004540.1-204ENST00000449537 HEBP2Q9Y5Z4 205 aa12.06□□□□□ -0.48
AC004540.1-204ENST00000449537 NSG1A0A0A6YYJ2 146 aa12.05□□□□□ -0.48
AC004540.1-204ENST00000449537 MGAT4DA6NG13 374 aa12.05□□□□□ -0.48
AC004540.1-204ENST00000449537 OR2AG2A6NM03 316 aa12.05□□□□□ -0.48
AC004540.1-204ENST00000449537 RNF212BA8MTL3 300 aa12.05□□□□□ -0.48
AC004540.1-204ENST00000449537 F8VZ95 297 aa12.05□□□□□ -0.48
AC004540.1-204ENST00000449537 ZNHIT1O43257 154 aa12.05□□□□□ -0.48
AC004540.1-204ENST00000449537 MT-CYBP00156 380 aaPredicted RBP12.05□□□□□ -0.48
AC004540.1-204ENST00000449537 SLC4A1P02730 911 aa12.05□□□□□ -0.48
AC004540.1-204ENST00000449537 PTMAP06454 111 aaKnown RBP12.05□□□□□ -0.48
AC004540.1-204ENST00000449537 CCDC172P0C7W6 258 aa12.05□□□□□ -0.48
AC004540.1-204ENST00000449537 UCHL3P15374 230 aa12.05□□□□□ -0.48
AC004540.1-204ENST00000449537 PSMA2P25787 234 aa12.05□□□□□ -0.48
AC004540.1-204ENST00000449537 CHRNB4P30926 498 aa12.05□□□□□ -0.48
AC004540.1-204ENST00000449537 HOXC12P31275 282 aa12.05□□□□□ -0.48
AC004540.1-204ENST00000449537 ARL4AP40617 200 aa12.05□□□□□ -0.48
AC004540.1-204ENST00000449537 NSG1P42857 185 aa12.05□□□□□ -0.48
AC004540.1-204ENST00000449537 CARSP49589 748 aaKnown RBP12.05□□□□□ -0.48
AC004540.1-204ENST00000449537 ZNF75DP51815 510 aa12.05□□□□□ -0.48
AC004540.1-204ENST00000449537 ARSFP54793 590 aa12.05□□□□□ -0.48
AC004540.1-204ENST00000449537 PPP2R2BQ00005 443 aa12.05□□□□□ -0.48
AC004540.1-204ENST00000449537 TFDP3Q5H9I0 405 aa12.05□□□□□ -0.48
AC004540.1-204ENST00000449537 ZNF766Q5HY98 468 aa12.05□□□□□ -0.48
AC004540.1-204ENST00000449537 ABHD17BQ5VST6 288 aa12.05□□□□□ -0.48
AC004540.1-204ENST00000449537 TXNRD3NBQ6F5E7 133 aa12.05□□□□□ -0.48
AC004540.1-204ENST00000449537 TMEM211Q6ICI0 200 aa12.05□□□□□ -0.48
AC004540.1-204ENST00000449537 HIBCHQ6NVY1 386 aaPredicted RBP12.05□□□□□ -0.48
AC004540.1-204ENST00000449537 TTLL10Q6ZVT0 673 aa12.05□□□□□ -0.48
AC004540.1-204ENST00000449537 NDUFAF7Q7L592 441 aa12.05□□□□□ -0.48
AC004540.1-204ENST00000449537 VSTM4Q8IW00 320 aa12.05□□□□□ -0.48
AC004540.1-204ENST00000449537 GHDCQ8N2G8 530 aa12.05□□□□□ -0.48
AC004540.1-204ENST00000449537 FERD3LQ96RJ6 166 aa12.05□□□□□ -0.48
AC004540.1-204ENST00000449537 MESP1Q9BRJ9 268 aa12.05□□□□□ -0.48
AC004540.1-204ENST00000449537 CHRNA10Q9GZZ6 450 aa12.05□□□□□ -0.48
AC004540.1-204ENST00000449537 MAGEE1Q9HCI5 957 aa12.05□□□□□ -0.48
AC004540.1-204ENST00000449537 NLRC4Q9NPP4 1024 aa12.05□□□□□ -0.48
AC004540.1-204ENST00000449537 ACTR10Q9NZ32 417 aa12.05□□□□□ -0.48
AC004540.1-204ENST00000449537 LRFN1Q9P244 771 aa12.05□□□□□ -0.48
AC004540.1-204ENST00000449537 ADAM21Q9UKJ8 722 aa12.05□□□□□ -0.48
AC004540.1-204ENST00000449537 PLCL2Q9UPR0 1127 aa12.05□□□□□ -0.48
AC004540.1-204ENST00000449537 HIVEP2P31629 2446 aa12.04□□□□□ -0.48
AC004540.1-204ENST00000449537 A0A1B0GX78 115 aa12.04□□□□□ -0.48
AC004540.1-204ENST00000449537 RNF8O76064 485 aa12.04□□□□□ -0.48
AC004540.1-204ENST00000449537 POLBP06746 335 aa12.04□□□□□ -0.48
AC004540.1-204ENST00000449537 PIRTP0C851 137 aa12.04□□□□□ -0.48
AC004540.1-204ENST00000449537 SERPINB6P35237 376 aa12.04□□□□□ -0.48
AC004540.1-204ENST00000449537 RAB28P51157 221 aa12.04□□□□□ -0.48
AC004540.1-204ENST00000449537 ZIC1Q15915 447 aa12.04□□□□□ -0.48
AC004540.1-204ENST00000449537 CLEC16AQ2KHT3 1053 aa12.04□□□□□ -0.48
AC004540.1-204ENST00000449537 DEFB113Q30KQ7 82 aa12.04□□□□□ -0.48
AC004540.1-204ENST00000449537 ATG9BQ674R7 924 aa12.04□□□□□ -0.48
AC004540.1-204ENST00000449537 SPESP1Q6UW49 350 aa12.04□□□□□ -0.48
AC004540.1-204ENST00000449537 NAPRTQ6XQN6 538 aa12.04□□□□□ -0.48
AC004540.1-204ENST00000449537 RIPOR1Q6ZS17 1223 aa12.04□□□□□ -0.48
AC004540.1-204ENST00000449537 MON1BQ7L1V2 547 aa12.04□□□□□ -0.48
AC004540.1-204ENST00000449537 CNGA4Q8IV77 575 aa12.04□□□□□ -0.48
AC004540.1-204ENST00000449537 C8orf44Q96CB5 159 aa12.04□□□□□ -0.48
AC004540.1-204ENST00000449537 NAP1L5Q96NT1 182 aaPredicted RBP12.04□□□□□ -0.48
AC004540.1-204ENST00000449537 GPATCH1Q9BRR8 931 aaKnown RBP12.04□□□□□ -0.48
AC004540.1-204ENST00000449537 CRB3Q9BUF7 120 aa12.04□□□□□ -0.48
AC004540.1-204ENST00000449537 IMPACTQ9P2X3 320 aa12.04□□□□□ -0.48
AC004540.1-204ENST00000449537 AMACRQ9UHK6 382 aa12.04□□□□□ -0.48
AC004540.1-204ENST00000449537 VSTM2BA6NLU5 285 aa12.03□□□□□ -0.48
AC004540.1-204ENST00000449537 MATN3O15232 486 aa12.03□□□□□ -0.48
AC004540.1-204ENST00000449537 MIPP30301 263 aa12.03□□□□□ -0.48
AC004540.1-204ENST00000449537 LDLRAP1Q5SW96 308 aa12.03□□□□□ -0.48
AC004540.1-204ENST00000449537 FNBP1LQ5T0N5 605 aa12.03□□□□□ -0.48
AC004540.1-204ENST00000449537 CHSY3Q70JA7 882 aa12.03□□□□□ -0.48
AC004540.1-204ENST00000449537 COX15Q7KZN9 410 aa12.03□□□□□ -0.48
AC004540.1-204ENST00000449537 AMIGO1Q86WK6 493 aa12.03□□□□□ -0.48
AC004540.1-204ENST00000449537 ADGRF3Q8IZF5 1079 aa12.03□□□□□ -0.48
AC004540.1-204ENST00000449537 DNAJC22Q8N4W6 341 aa12.03□□□□□ -0.48
AC004540.1-204ENST00000449537 MYRIPQ8NFW9 859 aa12.03□□□□□ -0.48
AC004540.1-204ENST00000449537 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.03□□□□□ -0.48
AC004540.1-204ENST00000449537 MAML1Q92585 1016 aa12.03□□□□□ -0.48
AC004540.1-204ENST00000449537 RND1Q92730 232 aa12.03□□□□□ -0.48
AC004540.1-204ENST00000449537 HDAC10Q969S8 669 aa12.03□□□□□ -0.48
AC004540.1-204ENST00000449537 RMDN2Q96LZ7 410 aa12.03□□□□□ -0.48
AC004540.1-204ENST00000449537 NRTNQ99748 197 aa12.03□□□□□ -0.48
AC004540.1-204ENST00000449537 CCM2Q9BSQ5 444 aa12.03□□□□□ -0.48
AC004540.1-204ENST00000449537 GANQ9H2C0 597 aa12.03□□□□□ -0.48
AC004540.1-204ENST00000449537 TFB2MQ9H5Q4 396 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms