RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 KIR3DX1Q9H7L2 352 aa13.66□□□□□ -0.22
SHMT2-203ENST00000449049 PRAMEF33A0A0G2JMD5 474 aa13.66□□□□□ -0.22
SHMT2-203ENST00000449049 ZNF806P0C7X5 589 aa13.66□□□□□ -0.22
SHMT2-203ENST00000449049 ERGP11308 486 aa13.66□□□□□ -0.22
SHMT2-203ENST00000449049 SLC9B2Q86UD5 537 aa13.66□□□□□ -0.22
SHMT2-203ENST00000449049 NUDCD3Q8IVD9 361 aa13.66□□□□□ -0.22
SHMT2-203ENST00000449049 OR2I1PQ8NGU4 316 aa13.66□□□□□ -0.22
SHMT2-203ENST00000449049 MAPK15Q8TD08 544 aa13.66□□□□□ -0.22
SHMT2-203ENST00000449049 PHF21BQ96EK2 531 aa13.66□□□□□ -0.22
SHMT2-203ENST00000449049 L3HYPDHQ96EM0 354 aa13.66□□□□□ -0.22
SHMT2-203ENST00000449049 SLC40A1Q9NP59 571 aa13.66□□□□□ -0.22
SHMT2-203ENST00000449049 PSD3Q9NYI0 1048 aa13.66□□□□□ -0.22
SHMT2-203ENST00000449049 NLGN3Q9NZ94 848 aa13.66□□□□□ -0.22
SHMT2-203ENST00000449049 NCKIPSDQ9NZQ3 722 aa13.66□□□□□ -0.22
SHMT2-203ENST00000449049 SPATA7Q9P0W8 599 aa13.66□□□□□ -0.22
SHMT2-203ENST00000449049 STOX2Q9P2F5 926 aaPredicted RBP13.66□□□□□ -0.22
SHMT2-203ENST00000449049 CPNE7Q9UBL6 633 aa13.66□□□□□ -0.22
SHMT2-203ENST00000449049 TDRD6O60522 2096 aaKnown RBP13.65□□□□□ -0.22
SHMT2-203ENST00000449049 TRBV23OR9-2A0A075B6M9 112 aa13.65□□□□□ -0.22
SHMT2-203ENST00000449049 WDR91A4D1P6 747 aa13.65□□□□□ -0.22
SHMT2-203ENST00000449049 TAPBPO15533 448 aa13.65□□□□□ -0.22
SHMT2-203ENST00000449049 TRIM13O60858 407 aa13.65□□□□□ -0.22
SHMT2-203ENST00000449049 SLC16A8O95907 504 aa13.65□□□□□ -0.22
SHMT2-203ENST00000449049 FGF3P11487 239 aaPredicted RBP13.65□□□□□ -0.22
SHMT2-203ENST00000449049 IMPA1P29218 277 aa13.65□□□□□ -0.22
SHMT2-203ENST00000449049 GGT5P36269 586 aa13.65□□□□□ -0.22
SHMT2-203ENST00000449049 PRKG2Q13237 762 aa13.65□□□□□ -0.22
SHMT2-203ENST00000449049 KRT33BQ14525 404 aa13.65□□□□□ -0.22
SHMT2-203ENST00000449049 ZXDCQ2QGD7 858 aaPredicted RBP13.65□□□□□ -0.22
SHMT2-203ENST00000449049 AVL9Q8NBF6 648 aa13.65□□□□□ -0.22
SHMT2-203ENST00000449049 GPR156Q8NFN8 814 aa13.65□□□□□ -0.22
SHMT2-203ENST00000449049 OR6Y1Q8NGX8 325 aa13.65□□□□□ -0.22
SHMT2-203ENST00000449049 ATL1Q8WXF7 558 aa13.65□□□□□ -0.22
SHMT2-203ENST00000449049 TMEM237Q96Q45 408 aa13.65□□□□□ -0.22
SHMT2-203ENST00000449049 TMEM79Q9BSE2 394 aa13.65□□□□□ -0.22
SHMT2-203ENST00000449049 GTPBP2Q9BX10 602 aaKnown RBP13.65□□□□□ -0.22
SHMT2-203ENST00000449049 C1QTNF3Q9BXJ4 246 aa13.65□□□□□ -0.22
SHMT2-203ENST00000449049 CIDEBQ9UHD4 219 aa13.65□□□□□ -0.22
SHMT2-203ENST00000449049 TDRKHQ9Y2W6 561 aaKnown RBP13.65□□□□□ -0.22
SHMT2-203ENST00000449049 LNP1A1A4G5 178 aa13.64□□□□□ -0.23
SHMT2-203ENST00000449049 PCDHGA12O60330 932 aa13.64□□□□□ -0.23
SHMT2-203ENST00000449049 KDM1AO60341 852 aa13.64□□□□□ -0.23
SHMT2-203ENST00000449049 VIPP01282 170 aa13.64□□□□□ -0.23
SHMT2-203ENST00000449049 ZNF883P0CG24 379 aa13.64□□□□□ -0.23
SHMT2-203ENST00000449049 IMPDH1P20839 514 aa13.64□□□□□ -0.23
SHMT2-203ENST00000449049 MDH1P40925 334 aaKnown RBP13.64□□□□□ -0.23
SHMT2-203ENST00000449049 FASLGP48023 281 aa13.64□□□□□ -0.23
SHMT2-203ENST00000449049 HERVK_113P63132 956 aa13.64□□□□□ -0.23
SHMT2-203ENST00000449049 ASPHQ12797 758 aa13.64□□□□□ -0.23
SHMT2-203ENST00000449049 ARHGAP19Q14CB8 494 aa13.64□□□□□ -0.23
SHMT2-203ENST00000449049 PCBP2Q15366 365 aaKnown RBP eCLIP13.64□□□□□ -0.23
SHMT2-203ENST00000449049 PDK4Q16654 411 aa13.64□□□□□ -0.23
SHMT2-203ENST00000449049 METTL2BQ6P1Q9 378 aaKnown RBP13.64□□□□□ -0.23
SHMT2-203ENST00000449049 RAB44Q7Z6P3 723 aaPredicted RBP13.64□□□□□ -0.23
SHMT2-203ENST00000449049 GATAD2AQ86YP4 633 aa13.64□□□□□ -0.23
SHMT2-203ENST00000449049 TRIM48Q8IWZ4 208 aa13.64□□□□□ -0.23
SHMT2-203ENST00000449049 RBM12BQ8IXT5 1001 aaKnown RBP13.64□□□□□ -0.23
SHMT2-203ENST00000449049 KLHDC8AQ8IYD2 350 aa13.64□□□□□ -0.23
SHMT2-203ENST00000449049 MINDY1Q8N5J2 469 aa13.64□□□□□ -0.23
SHMT2-203ENST00000449049 OR52E1Q8NGJ3 308 aa13.64□□□□□ -0.23
SHMT2-203ENST00000449049 ZNF480Q8WV37 535 aa13.64□□□□□ -0.23
SHMT2-203ENST00000449049 DYDC1Q8WWB3 177 aa13.64□□□□□ -0.23
SHMT2-203ENST00000449049 CKAP2Q8WWK9 683 aa13.64□□□□□ -0.23
SHMT2-203ENST00000449049 DUSP23Q9BVJ7 150 aa13.64□□□□□ -0.23
SHMT2-203ENST00000449049 RAB11FIP5Q9BXF6 653 aa13.64□□□□□ -0.23
SHMT2-203ENST00000449049 ERVK-6Q9BXR3 956 aa13.64□□□□□ -0.23
SHMT2-203ENST00000449049 FAM86C1Q9NVL1 165 aa13.64□□□□□ -0.23
SHMT2-203ENST00000449049 TNPO3Q9Y5L0 923 aaKnown RBP13.64□□□□□ -0.23
SHMT2-203ENST00000449049 RPS17P08708 135 aaKnown RBP13.64□□□□□ -0.23
SHMT2-203ENST00000449049 PKLRP30613 574 aa13.64□□□□□ -0.23
SHMT2-203ENST00000449049 HSD17B2P37059 387 aa13.64□□□□□ -0.23
SHMT2-203ENST00000449049 SLC6A12P48065 614 aa13.64□□□□□ -0.23
SHMT2-203ENST00000449049 AGTR2P50052 363 aa13.64□□□□□ -0.23
SHMT2-203ENST00000449049 MAZP56270 477 aaKnown RBP13.64□□□□□ -0.23
SHMT2-203ENST00000449049 CYP2A13Q16696 494 aa13.64□□□□□ -0.23
SHMT2-203ENST00000449049 C18orf21Q32NC0 220 aaPredicted RBP13.64□□□□□ -0.23
SHMT2-203ENST00000449049 C14orf28Q4W4Y0 310 aa13.64□□□□□ -0.23
SHMT2-203ENST00000449049 ZNF678Q5SXM1 525 aa13.64□□□□□ -0.23
SHMT2-203ENST00000449049 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.64□□□□□ -0.23
SHMT2-203ENST00000449049 AGTRAPQ6RW13 159 aa13.64□□□□□ -0.23
SHMT2-203ENST00000449049 LRRC56Q8IYG6 542 aaPredicted RBP13.64□□□□□ -0.23
SHMT2-203ENST00000449049 ARL14Q8N4G2 192 aa13.64□□□□□ -0.23
SHMT2-203ENST00000449049 ARL10Q8N8L6 244 aa13.64□□□□□ -0.23
SHMT2-203ENST00000449049 KYQ8NBH2 561 aa13.64□□□□□ -0.23
SHMT2-203ENST00000449049 OR4C6Q8NH72 309 aa13.64□□□□□ -0.23
SHMT2-203ENST00000449049 RAB3IL1Q8TBN0 382 aa13.64□□□□□ -0.23
SHMT2-203ENST00000449049 SREK1Q8WXA9 508 aaKnown RBP13.64□□□□□ -0.23
SHMT2-203ENST00000449049 GEMIN8Q9NWZ8 242 aaKnown RBP13.64□□□□□ -0.23
SHMT2-203ENST00000449049 WWOXQ9NZC7 414 aa13.64□□□□□ -0.23
SHMT2-203ENST00000449049 PLAGL1Q9UM63 463 aa13.64□□□□□ -0.23
SHMT2-203ENST00000449049 CACNA1EQ15878 2313 aa13.64□□□□□ -0.23
SHMT2-203ENST00000449049 PI4KAP42356 2102 aa13.63□□□□□ -0.23
SHMT2-203ENST00000449049 LRP3O75074 770 aa13.63□□□□□ -0.23
SHMT2-203ENST00000449049 H2AFYO75367 372 aaKnown RBP13.63□□□□□ -0.23
SHMT2-203ENST00000449049 SIX3O95343 332 aaPredicted RBP13.63□□□□□ -0.23
SHMT2-203ENST00000449049 LMNAP02545 664 aaKnown RBP13.63□□□□□ -0.23
SHMT2-203ENST00000449049 BGNP21810 368 aa13.63□□□□□ -0.23
SHMT2-203ENST00000449049 EEF1DP29692 281 aaKnown RBP13.63□□□□□ -0.23
SHMT2-203ENST00000449049 RAB28P51157 221 aa13.63□□□□□ -0.23
SHMT2-203ENST00000449049 PNLIPRP1P54315 467 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms