RNA–Protein interactions for RNA: ENST00000448192.1

DDX56-207, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-207ENST00000448192 LACTB2Q53H82 288 aaPredicted RBP17.09■□□□□ 0.33
DDX56-207ENST00000448192 IZUMO3Q5VZ72 239 aa17.09■□□□□ 0.33
DDX56-207ENST00000448192 MRNIPQ6NTE8 343 aa17.09■□□□□ 0.33
DDX56-207ENST00000448192 CASC4Q6P4E1 433 aa17.09■□□□□ 0.33
DDX56-207ENST00000448192 UNC5DQ6UXZ4 953 aa17.09■□□□□ 0.33
DDX56-207ENST00000448192 SDCCAG8Q86SQ7 713 aaPredicted RBP17.09■□□□□ 0.33
DDX56-207ENST00000448192 LRRC6Q86X45 466 aa17.09■□□□□ 0.33
DDX56-207ENST00000448192 SYTL1Q8IYJ3 562 aa17.09■□□□□ 0.33
DDX56-207ENST00000448192 C2orf73Q8N5S3 287 aaPredicted RBP17.09■□□□□ 0.33
DDX56-207ENST00000448192 ENDOVQ8N8Q3 282 aaKnown RBP17.09■□□□□ 0.33
DDX56-207ENST00000448192 LMNTD1Q8N9Z9 388 aa17.09■□□□□ 0.33
DDX56-207ENST00000448192 FLVCR1-AS1Q8TAF5 88 aa17.09■□□□□ 0.33
DDX56-207ENST00000448192 SKA2Q8WVK7 121 aaPredicted RBP17.09■□□□□ 0.33
DDX56-207ENST00000448192 MRM3Q9HC36 420 aaKnown RBP17.09■□□□□ 0.33
DDX56-207ENST00000448192 PCMTD2Q9NV79 361 aa17.09■□□□□ 0.33
DDX56-207ENST00000448192 SOX13Q9UN79 622 aa17.09■□□□□ 0.33
DDX56-207ENST00000448192 MKRN2OSH3BPM6 223 aa17.08■□□□□ 0.32
DDX56-207ENST00000448192 KPNA5O15131 536 aa17.08■□□□□ 0.32
DDX56-207ENST00000448192 RFPL1O75677 317 aa17.08■□□□□ 0.32
DDX56-207ENST00000448192 OR2B3O76000 313 aa17.08■□□□□ 0.32
DDX56-207ENST00000448192 SLCO2B1O94956 709 aa17.08■□□□□ 0.32
DDX56-207ENST00000448192 WISP1O95388 367 aa17.08■□□□□ 0.32
DDX56-207ENST00000448192 ARNTP27540 789 aa17.08■□□□□ 0.32
DDX56-207ENST00000448192 PEBP1P30086 187 aaKnown RBP17.08■□□□□ 0.32
DDX56-207ENST00000448192 PKLRP30613 574 aa17.08■□□□□ 0.32
DDX56-207ENST00000448192 PMS2P54278 862 aa17.08■□□□□ 0.32
DDX56-207ENST00000448192 KCNC4Q03721 635 aa17.08■□□□□ 0.32
DDX56-207ENST00000448192 IL10RAQ13651 578 aa17.08■□□□□ 0.32
DDX56-207ENST00000448192 KIR2DS3Q14952 304 aa17.08■□□□□ 0.32
DDX56-207ENST00000448192 KYNUQ16719 465 aa17.08■□□□□ 0.32
DDX56-207ENST00000448192 ANKRD22Q5VYY1 191 aa17.08■□□□□ 0.32
DDX56-207ENST00000448192 OTOAQ7RTW8 1153 aa17.08■□□□□ 0.32
DDX56-207ENST00000448192 TAX1BP1Q86VP1 789 aa17.08■□□□□ 0.32
DDX56-207ENST00000448192 DCUN1D3Q8IWE4 304 aa17.08■□□□□ 0.32
DDX56-207ENST00000448192 FAM20CQ8IXL6 584 aa17.08■□□□□ 0.32
DDX56-207ENST00000448192 RASGEF1CQ8N431 466 aa17.08■□□□□ 0.32
DDX56-207ENST00000448192 IRAK4Q9NWZ3 460 aa17.08■□□□□ 0.32
DDX56-207ENST00000448192 TLK1Q9UKI8 766 aa17.08■□□□□ 0.32
DDX56-207ENST00000448192 SNX7Q9UNH6 387 aa17.08■□□□□ 0.32
DDX56-207ENST00000448192 TP53TG5Q9Y2B4 290 aa17.08■□□□□ 0.32
DDX56-207ENST00000448192 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.07■□□□□ 0.32
DDX56-207ENST00000448192 PFDN6O15212 129 aa17.07■□□□□ 0.32
DDX56-207ENST00000448192 HCRTR1O43613 425 aa17.07■□□□□ 0.32
DDX56-207ENST00000448192 DNAJB5O75953 348 aa17.07■□□□□ 0.32
DDX56-207ENST00000448192 HBQ1P09105 142 aa17.07■□□□□ 0.32
DDX56-207ENST00000448192 RAB40ALP0C0E4 278 aa17.07■□□□□ 0.32
DDX56-207ENST00000448192 ATXN8OSP0DMR3 200 aa17.07■□□□□ 0.32
DDX56-207ENST00000448192 NR1D1P20393 614 aa17.07■□□□□ 0.32
DDX56-207ENST00000448192 CD9P21926 228 aa17.07■□□□□ 0.32
DDX56-207ENST00000448192 RPS3P23396 243 aaKnown RBP eCLIP17.07■□□□□ 0.322e-6■■□□□ 14.1
DDX56-207ENST00000448192 FMO4P31512 558 aa17.07■□□□□ 0.32
DDX56-207ENST00000448192 TLE1Q04724 770 aa17.07■□□□□ 0.32
DDX56-207ENST00000448192 SLC5A12Q1EHB4 618 aa17.07■□□□□ 0.32
DDX56-207ENST00000448192 CTSL3PQ5NE16 218 aa17.07■□□□□ 0.32
DDX56-207ENST00000448192 FAM69BQ5VUD6 431 aa17.07■□□□□ 0.32
DDX56-207ENST00000448192 TTC23LQ6PF05 361 aa17.07■□□□□ 0.32
DDX56-207ENST00000448192 LINC01555Q8NAE3 123 aa17.07■□□□□ 0.32
DDX56-207ENST00000448192 THAP4Q8WY91 577 aa17.07■□□□□ 0.32
DDX56-207ENST00000448192 IL17FQ96PD4 163 aa17.07■□□□□ 0.32
DDX56-207ENST00000448192 NAP1L3Q99457 506 aaPredicted RBP17.07■□□□□ 0.32
DDX56-207ENST00000448192 NLNQ9BYT8 704 aa17.07■□□□□ 0.32
DDX56-207ENST00000448192 SPRTNQ9H040 489 aaPredicted RBP17.07■□□□□ 0.32
DDX56-207ENST00000448192 CLMPQ9H6B4 373 aa17.07■□□□□ 0.32
DDX56-207ENST00000448192 SAMD15Q9P1V8 674 aa17.07■□□□□ 0.32
DDX56-207ENST00000448192 TSR3Q9UJK0 312 aaKnown RBP17.07■□□□□ 0.32
DDX56-207ENST00000448192 SLC39A10Q9ULF5 831 aa17.07■□□□□ 0.32
DDX56-207ENST00000448192 KLHL20Q9Y2M5 609 aa17.07■□□□□ 0.32
DDX56-207ENST00000448192 TNRC6AQ8NDV7 1962 aaKnown RBP17.06■□□□□ 0.32
DDX56-207ENST00000448192 ARGFXA6NJG6 315 aa17.06■□□□□ 0.32
DDX56-207ENST00000448192 GOLGA8MH3BSY2 632 aa17.06■□□□□ 0.32
DDX56-207ENST00000448192 PGRMC1O00264 195 aaKnown RBP17.06■□□□□ 0.32
DDX56-207ENST00000448192 PAMP19021 973 aa17.06■□□□□ 0.32
DDX56-207ENST00000448192 AGXTP21549 392 aa17.06■□□□□ 0.32
DDX56-207ENST00000448192 COILP38432 576 aaPredicted RBP17.06■□□□□ 0.32
DDX56-207ENST00000448192 MAGEA6P43360 314 aa17.06■□□□□ 0.32
DDX56-207ENST00000448192 CHAF1BQ13112 559 aa17.06■□□□□ 0.32
DDX56-207ENST00000448192 GRB7Q14451 532 aa17.06■□□□□ 0.32
DDX56-207ENST00000448192 RNF187Q5TA31 235 aaPredicted RBP17.06■□□□□ 0.32
DDX56-207ENST00000448192 CCDC137Q6PK04 289 aaKnown RBP17.06■□□□□ 0.32
DDX56-207ENST00000448192 CAND1Q86VP6 1230 aaKnown RBP17.06■□□□□ 0.32
DDX56-207ENST00000448192 APLFQ8IW19 511 aaPredicted RBP17.06■□□□□ 0.32
DDX56-207ENST00000448192 SLC35F6Q8N357 371 aa17.06■□□□□ 0.32
DDX56-207ENST00000448192 FAM136AQ96C01 138 aa17.06■□□□□ 0.32
DDX56-207ENST00000448192 BIRC8Q96P09 236 aa17.06■□□□□ 0.32
DDX56-207ENST00000448192 DPH2Q9BQC3 489 aaPredicted RBP17.06■□□□□ 0.32
DDX56-207ENST00000448192 TRIM56Q9BRZ2 755 aaKnown RBP17.06■□□□□ 0.32
DDX56-207ENST00000448192 MENTQ9BUN1 341 aa17.06■□□□□ 0.32
DDX56-207ENST00000448192 TRIM55Q9BYV6 548 aa17.06■□□□□ 0.32
DDX56-207ENST00000448192 CHRNA10Q9GZZ6 450 aa17.06■□□□□ 0.32
DDX56-207ENST00000448192 GRPEL1Q9HAV7 217 aa17.06■□□□□ 0.32
DDX56-207ENST00000448192 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.06■□□□□ 0.32
DDX56-207ENST00000448192 ANAPC2Q9UJX6 822 aa17.06■□□□□ 0.32
DDX56-207ENST00000448192 TCFL5Q9UL49 500 aa17.06■□□□□ 0.32
DDX56-207ENST00000448192 RUVBL2Q9Y230 463 aaKnown RBP17.06■□□□□ 0.32
DDX56-207ENST00000448192 CRYL1Q9Y2S2 319 aa17.06■□□□□ 0.32
DDX56-207ENST00000448192 NFS1Q9Y697 457 aa17.06■□□□□ 0.32
DDX56-207ENST00000448192 AP1M2Q9Y6Q5 423 aa17.06■□□□□ 0.32
DDX56-207ENST00000448192 CCDC88CQ9P219 2028 aa17.06■□□□□ 0.32
DDX56-207ENST00000448192 FER1L5A0AVI2 2057 aa17.05■□□□□ 0.32
DDX56-207ENST00000448192 C9J4A7 227 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms