RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 FBXO15Q8NCQ5 510 aaPredicted RBP8.38□□□□□ -1.07
PTPN3-204ENST00000446349 SMARCD2Q92925 531 aa8.38□□□□□ -1.07
PTPN3-204ENST00000446349 VPS29Q9UBQ0 182 aa8.38□□□□□ -1.07
PTPN3-204ENST00000446349 ELOA3DA6NLF2 546 aaPredicted RBP8.38□□□□□ -1.07
PTPN3-204ENST00000446349 ANKRD66B4E2M5 251 aa8.38□□□□□ -1.07
PTPN3-204ENST00000446349 LEFTY2O00292 366 aa8.38□□□□□ -1.07
PTPN3-204ENST00000446349 UNGP13051 313 aaPredicted RBP8.38□□□□□ -1.07
PTPN3-204ENST00000446349 PSMA1P25786 263 aaKnown RBP8.38□□□□□ -1.07
PTPN3-204ENST00000446349 MAT2AP31153 395 aaKnown RBP8.38□□□□□ -1.07
PTPN3-204ENST00000446349 CTSOP43234 321 aaPredicted RBP8.38□□□□□ -1.07
PTPN3-204ENST00000446349 RIPPLY1Q0D2K3 151 aa8.38□□□□□ -1.07
PTPN3-204ENST00000446349 TEAD2Q15562 447 aa8.38□□□□□ -1.07
PTPN3-204ENST00000446349 ELOA3BQ3SY89 546 aa8.38□□□□□ -1.07
PTPN3-204ENST00000446349 ZC3HC1Q86WB0 502 aaKnown RBP8.38□□□□□ -1.07
PTPN3-204ENST00000446349 ELOA3Q8NG57 546 aa8.38□□□□□ -1.07
PTPN3-204ENST00000446349 OR2T34Q8NGX1 318 aa8.38□□□□□ -1.07
PTPN3-204ENST00000446349 OR2T3Q8NH03 318 aa8.38□□□□□ -1.07
PTPN3-204ENST00000446349 TMEM5Q9Y2B1 443 aa8.38□□□□□ -1.07
PTPN3-204ENST00000446349 B4DGG1 531 aa8.38□□□□□ -1.07
PTPN3-204ENST00000446349 CYP17A1P05093 508 aa8.38□□□□□ -1.07
PTPN3-204ENST00000446349 CXCR1P25024 350 aa8.38□□□□□ -1.07
PTPN3-204ENST00000446349 DNASE1L1P49184 302 aa8.38□□□□□ -1.07
PTPN3-204ENST00000446349 RIPK1Q13546 671 aa8.38□□□□□ -1.07
PTPN3-204ENST00000446349 IL23RQ5VWK5 629 aa8.38□□□□□ -1.07
PTPN3-204ENST00000446349 DAW1Q8N136 415 aa8.38□□□□□ -1.07
PTPN3-204ENST00000446349 OR6C4Q8NGE1 309 aa8.38□□□□□ -1.07
PTPN3-204ENST00000446349 SNX33Q8WV41 574 aa8.38□□□□□ -1.07
PTPN3-204ENST00000446349 FCGR1BQ92637 280 aa8.38□□□□□ -1.07
PTPN3-204ENST00000446349 SCGB3A2Q96PL1 93 aa8.38□□□□□ -1.07
PTPN3-204ENST00000446349 LGALS13Q9UHV8 139 aa8.38□□□□□ -1.07
PTPN3-204ENST00000446349 GSC2O15499 205 aa8.38□□□□□ -1.07
PTPN3-204ENST00000446349 C5AR1P21730 350 aa8.38□□□□□ -1.07
PTPN3-204ENST00000446349 RABIFP47224 123 aa8.38□□□□□ -1.07
PTPN3-204ENST00000446349 RPS14P62263 151 aaKnown RBP8.38□□□□□ -1.07
PTPN3-204ENST00000446349 AMZ1Q400G9 498 aa8.38□□□□□ -1.07
PTPN3-204ENST00000446349 THAP5Q7Z6K1 395 aa8.38□□□□□ -1.07
PTPN3-204ENST00000446349 PLXDC1Q8IUK5 500 aa8.38□□□□□ -1.07
PTPN3-204ENST00000446349 TSSK3Q96PN8 268 aa8.38□□□□□ -1.07
PTPN3-204ENST00000446349 IKZF2Q9UKS7 526 aa8.38□□□□□ -1.07
PTPN3-204ENST00000446349 TNFRSF11BO00300 401 aa8.38□□□□□ -1.07
PTPN3-204ENST00000446349 SNAPC1Q16533 368 aa8.38□□□□□ -1.07
PTPN3-204ENST00000446349 CYP1B1Q16678 543 aa8.38□□□□□ -1.07
PTPN3-204ENST00000446349 LDLRAD1Q5T700 205 aa8.38□□□□□ -1.07
PTPN3-204ENST00000446349 BTN2A1Q7KYR7 527 aa8.38□□□□□ -1.07
PTPN3-204ENST00000446349 PDPRQ8NCN5 879 aa8.38□□□□□ -1.07
PTPN3-204ENST00000446349 LMX1AQ8TE12 382 aa8.38□□□□□ -1.07
PTPN3-204ENST00000446349 JSRP1Q96MG2 331 aaPredicted RBP8.38□□□□□ -1.07
PTPN3-204ENST00000446349 HERPUD2Q9BSE4 406 aa8.38□□□□□ -1.07
PTPN3-204ENST00000446349 MGAT4AQ9UM21 535 aa8.38□□□□□ -1.07
PTPN3-204ENST00000446349 WBP11Q9Y2W2 641 aaKnown RBP8.38□□□□□ -1.07
PTPN3-204ENST00000446349 FAM92AA1XBS5 289 aa8.37□□□□□ -1.07
PTPN3-204ENST00000446349 SLC30A4O14863 429 aa8.37□□□□□ -1.07
PTPN3-204ENST00000446349 ERCC1P07992 297 aaPredicted RBP8.37□□□□□ -1.07
PTPN3-204ENST00000446349 NR1H2P55055 460 aa8.37□□□□□ -1.07
PTPN3-204ENST00000446349 HERVK_113P63132 956 aa8.37□□□□□ -1.07
PTPN3-204ENST00000446349 ERVK-8P63133 956 aa8.37□□□□□ -1.07
PTPN3-204ENST00000446349 RASSF6Q6ZTQ3 369 aa8.37□□□□□ -1.07
PTPN3-204ENST00000446349 TMCO2Q7Z6W1 182 aaPredicted RBP8.37□□□□□ -1.07
PTPN3-204ENST00000446349 GPR151Q8TDV0 419 aa8.37□□□□□ -1.07
PTPN3-204ENST00000446349 ERVK-6Q9BXR3 956 aa8.37□□□□□ -1.07
PTPN3-204ENST00000446349 DPEP3Q9H4B8 488 aa8.37□□□□□ -1.07
PTPN3-204ENST00000446349 RNPEPL1Q9HAU8 725 aa8.37□□□□□ -1.07
PTPN3-204ENST00000446349 RGS17Q9UGC6 210 aaPredicted RBP8.37□□□□□ -1.07
PTPN3-204ENST00000446349 FKBPLQ9UIM3 349 aa8.37□□□□□ -1.07
PTPN3-204ENST00000446349 ITGB1BP2Q9UKP3 347 aa8.37□□□□□ -1.07
PTPN3-204ENST00000446349 DMTF1Q9Y222 760 aa8.37□□□□□ -1.07
PTPN3-204ENST00000446349 SYNGR4O95473 234 aa8.37□□□□□ -1.07
PTPN3-204ENST00000446349 HNRNPLP14866 589 aaKnown RBP eCLIP8.37□□□□□ -1.07
PTPN3-204ENST00000446349 LMO2P25791 158 aa8.37□□□□□ -1.07
PTPN3-204ENST00000446349 BMPR1AP36894 532 aa8.37□□□□□ -1.07
PTPN3-204ENST00000446349 CTSKP43235 329 aa8.37□□□□□ -1.07
PTPN3-204ENST00000446349 ERN2Q76MJ5 926 aaKnown RBP8.37□□□□□ -1.07
PTPN3-204ENST00000446349 IFNLR1Q8IU57 520 aaPredicted RBP8.37□□□□□ -1.07
PTPN3-204ENST00000446349 PNPT1Q8TCS8 783 aaKnown RBP8.37□□□□□ -1.07
PTPN3-204ENST00000446349 GMLQ99445 158 aa8.37□□□□□ -1.07
PTPN3-204ENST00000446349 ASPNQ9BXN1 380 aa8.37□□□□□ -1.07
PTPN3-204ENST00000446349 RGPD2P0DJD1 1756 aa8.37□□□□□ -1.07
PTPN3-204ENST00000446349 MT-CYBP00156 380 aaPredicted RBP8.37□□□□□ -1.07
PTPN3-204ENST00000446349 GALTP07902 379 aa8.37□□□□□ -1.07
PTPN3-204ENST00000446349 ZNF3P17036 446 aa8.37□□□□□ -1.07
PTPN3-204ENST00000446349 RPL17P18621 184 aaKnown RBP8.37□□□□□ -1.07
PTPN3-204ENST00000446349 OR5L2Q8NGL0 311 aa8.37□□□□□ -1.07
PTPN3-204ENST00000446349 OR9A1PQ8NGU1 263 aa8.37□□□□□ -1.07
PTPN3-204ENST00000446349 CHRAC1Q9NRG0 131 aa8.37□□□□□ -1.07
PTPN3-204ENST00000446349 NOCTQ9UK39 431 aaKnown RBP8.37□□□□□ -1.07
PTPN3-204ENST00000446349 H3BNX3 289 aa8.37□□□□□ -1.07
PTPN3-204ENST00000446349 GRID2O43424 1007 aa8.37□□□□□ -1.07
PTPN3-204ENST00000446349 PCDH7O60245 1069 aa8.37□□□□□ -1.07
PTPN3-204ENST00000446349 OR5F1O95221 314 aa8.37□□□□□ -1.07
PTPN3-204ENST00000446349 GSTT2BP0CG30 244 aa8.37□□□□□ -1.07
PTPN3-204ENST00000446349 UGT1A3P35503 534 aa8.37□□□□□ -1.07
PTPN3-204ENST00000446349 CCNHP51946 323 aaPredicted RBP8.37□□□□□ -1.07
PTPN3-204ENST00000446349 SLC44A4Q53GD3 710 aa8.37□□□□□ -1.07
PTPN3-204ENST00000446349 SLCO2A1Q92959 643 aa8.37□□□□□ -1.07
PTPN3-204ENST00000446349 NXPE3Q969Y0 559 aa8.37□□□□□ -1.07
PTPN3-204ENST00000446349 WDR92Q96MX6 357 aa8.37□□□□□ -1.07
PTPN3-204ENST00000446349 OR2M4Q96R27 311 aa8.37□□□□□ -1.07
PTPN3-204ENST00000446349 WDR12Q9GZL7 423 aaKnown RBP8.37□□□□□ -1.07
PTPN3-204ENST00000446349 CLK4Q9HAZ1 481 aaKnown RBP8.37□□□□□ -1.07
PTPN3-204ENST00000446349 DTLQ9NZJ0 730 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms