RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 RHBDF2Q6PJF5 856 aa4.28□□□□□ -1.72
HMGB1P48-201ENST00000446155 SLC36A4Q6YBV0 504 aa4.28□□□□□ -1.72
HMGB1P48-201ENST00000446155 TPRG1Q6ZUI0 275 aa4.28□□□□□ -1.72
HMGB1P48-201ENST00000446155 C16orf82Q7Z2V1 217 aa4.28□□□□□ -1.72
HMGB1P48-201ENST00000446155 MIER3Q7Z3K6 550 aa4.28□□□□□ -1.72
HMGB1P48-201ENST00000446155 ADCK1Q86TW2 530 aa4.28□□□□□ -1.72
HMGB1P48-201ENST00000446155 C4orf19Q8IY42 314 aa4.28□□□□□ -1.72
HMGB1P48-201ENST00000446155 PCDH20Q8N6Y1 951 aaKnown RBP4.28□□□□□ -1.72
HMGB1P48-201ENST00000446155 RBMXL3Q8N7X1 1067 aaKnown RBP4.28□□□□□ -1.72
HMGB1P48-201ENST00000446155 CNNM3Q8NE01 707 aa4.28□□□□□ -1.72
HMGB1P48-201ENST00000446155 NEK11Q8NG66 645 aa4.28□□□□□ -1.72
HMGB1P48-201ENST00000446155 BBS10Q8TAM1 723 aa4.28□□□□□ -1.72
HMGB1P48-201ENST00000446155 NUDCD2Q8WVJ2 157 aa4.28□□□□□ -1.72
HMGB1P48-201ENST00000446155 PRCCQ92733 491 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P48-201ENST00000446155 N4BP2L2Q92802 583 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P48-201ENST00000446155 SYAP1Q96A49 352 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P48-201ENST00000446155 SPDL1Q96EA4 605 aa4.28□□□□□ -1.72
HMGB1P48-201ENST00000446155 FAM111AQ96PZ2 611 aa4.28□□□□□ -1.72
HMGB1P48-201ENST00000446155 SEPHS2Q99611 448 aa4.28□□□□□ -1.72
HMGB1P48-201ENST00000446155 KXD1Q9BQD3 176 aa4.28□□□□□ -1.72
HMGB1P48-201ENST00000446155 KRTAP17-1Q9BYP8 105 aa4.28□□□□□ -1.72
HMGB1P48-201ENST00000446155 TM6SF1Q9BZW5 370 aa4.28□□□□□ -1.72
HMGB1P48-201ENST00000446155 TMEM39BQ9GZU3 492 aa4.28□□□□□ -1.72
HMGB1P48-201ENST00000446155 FN3KQ9H479 309 aa4.28□□□□□ -1.72
HMGB1P48-201ENST00000446155 RAD21L1Q9H4I0 556 aa4.28□□□□□ -1.72
HMGB1P48-201ENST00000446155 SMARCAL1Q9NZC9 954 aa4.28□□□□□ -1.72
HMGB1P48-201ENST00000446155 ZNF224Q9NZL3 707 aa4.28□□□□□ -1.72
HMGB1P48-201ENST00000446155 PADI3Q9ULW8 664 aa4.28□□□□□ -1.72
HMGB1P48-201ENST00000446155 RABL2BQ9UNT1 228 aa4.28□□□□□ -1.72
HMGB1P48-201ENST00000446155 RIMBP3CA6NJZ7 1639 aa4.28□□□□□ -1.72
HMGB1P48-201ENST00000446155 RIMBP3BA6NNM3 1639 aa4.28□□□□□ -1.72
HMGB1P48-201ENST00000446155 RIMBP3Q9UFD9 1639 aa4.28□□□□□ -1.72
HMGB1P48-201ENST00000446155 SDR42E2A6NKP2 422 aa4.27□□□□□ -1.73
HMGB1P48-201ENST00000446155 SMPD2O60906 423 aa4.27□□□□□ -1.73
HMGB1P48-201ENST00000446155 MED24O75448 989 aa4.27□□□□□ -1.73
HMGB1P48-201ENST00000446155 TRIM16O95361 564 aa4.27□□□□□ -1.73
HMGB1P48-201ENST00000446155 ZBTB11O95625 1053 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P48-201ENST00000446155 PMS2P2O95744 297 aa4.27□□□□□ -1.73
HMGB1P48-201ENST00000446155 GH1P01241 217 aa4.27□□□□□ -1.73
HMGB1P48-201ENST00000446155 RAB40ALP0C0E4 278 aa4.27□□□□□ -1.73
HMGB1P48-201ENST00000446155 FERP16591 822 aa4.27□□□□□ -1.73
HMGB1P48-201ENST00000446155 KCNA5P22460 613 aa4.27□□□□□ -1.73
HMGB1P48-201ENST00000446155 ACAT1P24752 427 aaKnown RBP4.27□□□□□ -1.73
HMGB1P48-201ENST00000446155 BDKRB2P30411 391 aa4.27□□□□□ -1.73
HMGB1P48-201ENST00000446155 APOBEC1P41238 236 aaKnown RBP4.27□□□□□ -1.73
HMGB1P48-201ENST00000446155 CAMLGP49069 296 aa4.27□□□□□ -1.73
HMGB1P48-201ENST00000446155 CLCNKAP51800 687 aa4.27□□□□□ -1.73
HMGB1P48-201ENST00000446155 SLC26A5P58743 744 aa4.27□□□□□ -1.73
HMGB1P48-201ENST00000446155 CSNK2A1P68400 391 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P48-201ENST00000446155 CDK3Q00526 305 aa4.27□□□□□ -1.73
HMGB1P48-201ENST00000446155 TRA2AQ13595 282 aaKnown RBP eCLIP4.27□□□□□ -1.73
HMGB1P48-201ENST00000446155 MELKQ14680 651 aa4.27□□□□□ -1.73
HMGB1P48-201ENST00000446155 MVPQ14764 893 aaKnown RBP4.27□□□□□ -1.73
HMGB1P48-201ENST00000446155 CTF1Q16619 201 aa4.27□□□□□ -1.73
HMGB1P48-201ENST00000446155 MEP1AQ16819 746 aa4.27□□□□□ -1.73
HMGB1P48-201ENST00000446155 ANKDD1AQ495B1 522 aa4.27□□□□□ -1.73
HMGB1P48-201ENST00000446155 TXNRD3NBQ6F5E7 133 aa4.27□□□□□ -1.73
HMGB1P48-201ENST00000446155 NADSYN1Q6IA69 706 aa4.27□□□□□ -1.73
HMGB1P48-201ENST00000446155 CASC4Q6P4E1 433 aa4.27□□□□□ -1.73
HMGB1P48-201ENST00000446155 SLC27A1Q6PCB7 646 aa4.27□□□□□ -1.73
HMGB1P48-201ENST00000446155 FIGLAQ6QHK4 219 aa4.27□□□□□ -1.73
HMGB1P48-201ENST00000446155 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.27□□□□□ -1.73
HMGB1P48-201ENST00000446155 CREB3L2Q70SY1 520 aa4.27□□□□□ -1.73
HMGB1P48-201ENST00000446155 ATG9AQ7Z3C6 839 aa4.27□□□□□ -1.73
HMGB1P48-201ENST00000446155 ADHFE1Q8IWW8 467 aa4.27□□□□□ -1.73
HMGB1P48-201ENST00000446155 RASGEF1CQ8N431 466 aa4.27□□□□□ -1.73
HMGB1P48-201ENST00000446155 CSNK2A3Q8NEV1 391 aa4.27□□□□□ -1.73
HMGB1P48-201ENST00000446155 IPMKQ8NFU5 416 aa4.27□□□□□ -1.73
HMGB1P48-201ENST00000446155 TBC1D16Q8TBP0 767 aa4.27□□□□□ -1.73
HMGB1P48-201ENST00000446155 MAGEC3Q8TD91 643 aa4.27□□□□□ -1.73
HMGB1P48-201ENST00000446155 NSMAFQ92636 917 aa4.27□□□□□ -1.73
HMGB1P48-201ENST00000446155 TRIM44Q96DX7 344 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P48-201ENST00000446155 OTUB1Q96FW1 271 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P48-201ENST00000446155 C5orf30Q96GV9 206 aa4.27□□□□□ -1.73
HMGB1P48-201ENST00000446155 RBM18Q96H35 190 aaKnown RBP4.27□□□□□ -1.73
HMGB1P48-201ENST00000446155 IWS1Q96ST2 819 aa4.27□□□□□ -1.73
HMGB1P48-201ENST00000446155 OSBPL8Q9BZF1 889 aa4.27□□□□□ -1.73
HMGB1P48-201ENST00000446155 WNT5BQ9H1J7 359 aa4.27□□□□□ -1.73
HMGB1P48-201ENST00000446155 LMAN1LQ9HAT1 526 aa4.27□□□□□ -1.73
HMGB1P48-201ENST00000446155 PRMT8Q9NR22 394 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P48-201ENST00000446155 DNAJC11Q9NVH1 559 aa4.27□□□□□ -1.73
HMGB1P48-201ENST00000446155 HMG20BQ9P0W2 317 aa4.27□□□□□ -1.73
HMGB1P48-201ENST00000446155 SIX4Q9UIU6 781 aa4.27□□□□□ -1.73
HMGB1P48-201ENST00000446155 FBXL5Q9UKA1 691 aa4.27□□□□□ -1.73
HMGB1P48-201ENST00000446155 AURKCQ9UQB9 309 aa4.27□□□□□ -1.73
HMGB1P48-201ENST00000446155 SNX9Q9Y5X1 595 aa4.27□□□□□ -1.73
HMGB1P48-201ENST00000446155 TEX264Q9Y6I9 313 aa4.27□□□□□ -1.73
HMGB1P48-201ENST00000446155 ARHGEF11O15085 1522 aa4.26□□□□□ -1.73
HMGB1P48-201ENST00000446155 ASTN2O75129 1339 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P48-201ENST00000446155 A0A0A6YYC8 382 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P48-201ENST00000446155 ANKUB1A6NFN9 424 aa4.26□□□□□ -1.73
HMGB1P48-201ENST00000446155 ZNF587BE7ETH6 402 aa4.26□□□□□ -1.73
HMGB1P48-201ENST00000446155 I3L1I5 382 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P48-201ENST00000446155 TTI1O43156 1089 aa4.26□□□□□ -1.73
HMGB1P48-201ENST00000446155 TSPAN1O60635 241 aa4.26□□□□□ -1.73
HMGB1P48-201ENST00000446155 NOL3O60936 208 aaKnown RBP4.26□□□□□ -1.73
HMGB1P48-201ENST00000446155 LETM1O95202 739 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P48-201ENST00000446155 PGLSO95336 258 aa4.26□□□□□ -1.73
HMGB1P48-201ENST00000446155 PAPSS2O95340 614 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P48-201ENST00000446155 EGFP01133 1207 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms