RNA–Protein interactions for RNA: ENST00000445369.2

CLDN9-201, Transcript of claudin 9, humanhuman

APPRIS P1 BASIC

Gene CLDN9, Length 2,050 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9-201ENST00000445369 ABRAXAS1Q6UWZ7 409 aa17.4■□□□□ 0.38
CLDN9-201ENST00000445369 DNAJC14Q6Y2X3 702 aaPredicted RBP17.4■□□□□ 0.38
CLDN9-201ENST00000445369 Q6ZVU0 165 aa17.4■□□□□ 0.38
CLDN9-201ENST00000445369 TMEM25Q86YD3 366 aa17.4■□□□□ 0.38
CLDN9-201ENST00000445369 VRK3Q8IV63 474 aa17.4■□□□□ 0.38
CLDN9-201ENST00000445369 OFCC1Q8IZS5 231 aa17.4■□□□□ 0.38
CLDN9-201ENST00000445369 LEMD2Q8NC56 503 aa17.4■□□□□ 0.38
CLDN9-201ENST00000445369 CLHC1Q8NHS4 586 aa17.4■□□□□ 0.38
CLDN9-201ENST00000445369 FIG4Q92562 907 aa17.4■□□□□ 0.38
CLDN9-201ENST00000445369 OR52E6Q96RD3 313 aa17.4■□□□□ 0.38
CLDN9-201ENST00000445369 THUMPD3Q9BV44 507 aaKnown RBP17.4■□□□□ 0.38
CLDN9-201ENST00000445369 EMILIN2Q9BXX0 1053 aa17.4■□□□□ 0.38
CLDN9-201ENST00000445369 DLGAP4Q9Y2H0 992 aa17.4■□□□□ 0.38
CLDN9-201ENST00000445369 A0A1W2PQ67 120 aa17.39■□□□□ 0.37
CLDN9-201ENST00000445369 SEC24DO94855 1032 aaPredicted RBP17.39■□□□□ 0.37
CLDN9-201ENST00000445369 CLTBP09497 229 aa17.39■□□□□ 0.37
CLDN9-201ENST00000445369 PRPH2P23942 346 aa17.39■□□□□ 0.37
CLDN9-201ENST00000445369 CDK9P50750 372 aaKnown RBP17.39■□□□□ 0.37
CLDN9-201ENST00000445369 CHRNB3Q05901 458 aa17.39■□□□□ 0.37
CLDN9-201ENST00000445369 SP140Q13342 867 aa17.39■□□□□ 0.37
CLDN9-201ENST00000445369 DET1Q7L5Y6 550 aa17.39■□□□□ 0.37
CLDN9-201ENST00000445369 PLPP6Q8IY26 295 aa17.39■□□□□ 0.37
CLDN9-201ENST00000445369 FAM86B1Q8N7N1 296 aa17.39■□□□□ 0.37
CLDN9-201ENST00000445369 KREMEN2Q8NCW0 462 aa17.39■□□□□ 0.37
CLDN9-201ENST00000445369 OR52E4Q8NGH9 312 aa17.39■□□□□ 0.37
CLDN9-201ENST00000445369 SLC22A17Q8WUG5 538 aa17.39■□□□□ 0.37
CLDN9-201ENST00000445369 SELENOMQ8WWX9 145 aa17.39■□□□□ 0.37
CLDN9-201ENST00000445369 SH3GL1Q99961 368 aa17.39■□□□□ 0.37
CLDN9-201ENST00000445369 UGT2B28Q9BY64 529 aa17.39■□□□□ 0.37
CLDN9-201ENST00000445369 CD84Q9UIB8 345 aa17.39■□□□□ 0.37
CLDN9-201ENST00000445369 AP3M1Q9Y2T2 418 aa17.39■□□□□ 0.37
CLDN9-201ENST00000445369 PCDHGA11Q9Y5H2 935 aa17.39■□□□□ 0.37
CLDN9-201ENST00000445369 MTCL1Q9Y4B5 1905 aaKnown RBP17.39■□□□□ 0.37
CLDN9-201ENST00000445369 H0Y858 1186 aa17.38■□□□□ 0.37
CLDN9-201ENST00000445369 H0YAE9 185 aa17.38■□□□□ 0.37
CLDN9-201ENST00000445369 ASLP04424 464 aa17.38■□□□□ 0.37
CLDN9-201ENST00000445369 PABPC1P11940 636 aaKnown RBP17.38■□□□□ 0.37
CLDN9-201ENST00000445369 ATP1B2P14415 290 aaPredicted RBP17.38■□□□□ 0.37
CLDN9-201ENST00000445369 HNMTP50135 292 aa17.38■□□□□ 0.37
CLDN9-201ENST00000445369 ARSFP54793 590 aa17.38■□□□□ 0.37
CLDN9-201ENST00000445369 CLDN8P56748 225 aa17.38■□□□□ 0.37
CLDN9-201ENST00000445369 PHC1P78364 1004 aa17.38■□□□□ 0.37
CLDN9-201ENST00000445369 NKG7Q16617 165 aa17.38■□□□□ 0.37
CLDN9-201ENST00000445369 GTDC1Q4AE62 458 aa17.38■□□□□ 0.37
CLDN9-201ENST00000445369 PLEKHS1Q5SXH7 462 aa17.38■□□□□ 0.37
CLDN9-201ENST00000445369 NEK5Q6P3R8 708 aa17.38■□□□□ 0.37
CLDN9-201ENST00000445369 ENPP6Q6UWR7 440 aa17.38■□□□□ 0.37
CLDN9-201ENST00000445369 L3MBTL4Q8NA19 623 aa17.38■□□□□ 0.37
CLDN9-201ENST00000445369 DNAJB8Q8NHS0 232 aa17.38■□□□□ 0.37
CLDN9-201ENST00000445369 TMBIM1Q969X1 311 aa17.38■□□□□ 0.37
CLDN9-201ENST00000445369 PAIP1Q9H074 479 aaKnown RBP17.38■□□□□ 0.37
CLDN9-201ENST00000445369 SOX17Q9H6I2 414 aaPredicted RBP17.38■□□□□ 0.37
CLDN9-201ENST00000445369 SLC6A13Q9NSD5 602 aa17.38■□□□□ 0.37
CLDN9-201ENST00000445369 PKD2L2Q9NZM6 624 aa17.38■□□□□ 0.37
CLDN9-201ENST00000445369 SNX6Q9UNH7 406 aa17.38■□□□□ 0.37
CLDN9-201ENST00000445369 MAN2B2Q9Y2E5 1009 aa17.38■□□□□ 0.37
CLDN9-201ENST00000445369 ELOVL7A1L3X0 281 aa17.38■□□□□ 0.37
CLDN9-201ENST00000445369 WASH3PC4AMC7 463 aa17.38■□□□□ 0.37
CLDN9-201ENST00000445369 NEDD8-MDP1E9PL57 170 aa17.38■□□□□ 0.37
CLDN9-201ENST00000445369 NPIPB8E9PQR5 432 aa17.38■□□□□ 0.37
CLDN9-201ENST00000445369 GFYI3L273 518 aa17.38■□□□□ 0.37
CLDN9-201ENST00000445369 GSTA4O15217 222 aa17.38■□□□□ 0.37
CLDN9-201ENST00000445369 SLC16A5O15375 505 aa17.38■□□□□ 0.37
CLDN9-201ENST00000445369 CCL16O15467 120 aa17.38■□□□□ 0.37
CLDN9-201ENST00000445369 PRPS2P11908 318 aa17.38■□□□□ 0.37
CLDN9-201ENST00000445369 CSF2RAP15509 400 aa17.38■□□□□ 0.37
CLDN9-201ENST00000445369 ITGB8P26012 769 aa17.38■□□□□ 0.37
CLDN9-201ENST00000445369 ALDH3A2P51648 485 aa17.38■□□□□ 0.37
CLDN9-201ENST00000445369 BOP1Q14137 746 aaKnown RBP17.38■□□□□ 0.37
CLDN9-201ENST00000445369 PTCHD3Q3KNS1 767 aa17.38■□□□□ 0.37
CLDN9-201ENST00000445369 TMEM259Q4ZIN3 620 aa17.38■□□□□ 0.37
CLDN9-201ENST00000445369 SLC44A4Q53GD3 710 aa17.38■□□□□ 0.37
CLDN9-201ENST00000445369 LRIF1Q5T3J3 769 aa17.38■□□□□ 0.37
CLDN9-201ENST00000445369 SERPINA13PQ6UXR4 307 aa17.38■□□□□ 0.37
CLDN9-201ENST00000445369 GDPD4Q6W3E5 623 aa17.38■□□□□ 0.37
CLDN9-201ENST00000445369 LPCAT2Q7L5N7 544 aa17.38■□□□□ 0.37
CLDN9-201ENST00000445369 NECAB2Q7Z6G3 386 aa17.38■□□□□ 0.37
CLDN9-201ENST00000445369 ELOVL6Q9H5J4 265 aa17.38■□□□□ 0.37
CLDN9-201ENST00000445369 KAT8Q9H7Z6 458 aaKnown RBP17.38■□□□□ 0.37
CLDN9-201ENST00000445369 SERHLQ9NQF3 203 aa17.38■□□□□ 0.37
CLDN9-201ENST00000445369 HCFC1R1Q9NWW0 138 aa17.38■□□□□ 0.37
CLDN9-201ENST00000445369 ADGRE2Q9UHX3 823 aa17.38■□□□□ 0.37
CLDN9-201ENST00000445369 ERN1O75460 977 aaKnown RBP17.37■□□□□ 0.37
CLDN9-201ENST00000445369 TRMUO75648 421 aaKnown RBP17.37■□□□□ 0.37
CLDN9-201ENST00000445369 ALPLP05186 524 aa17.37■□□□□ 0.37
CLDN9-201ENST00000445369 ADH1AP07327 375 aa17.37■□□□□ 0.37
CLDN9-201ENST00000445369 HIST1H2AGP0C0S8 130 aaPredicted RBP17.37■□□□□ 0.37
CLDN9-201ENST00000445369 LINC00271P0C7V0 271 aa17.37■□□□□ 0.37
CLDN9-201ENST00000445369 PCNAP12004 261 aa17.37■□□□□ 0.37
CLDN9-201ENST00000445369 HOXB9P17482 250 aaPredicted RBP17.37■□□□□ 0.37
CLDN9-201ENST00000445369 HIST1H2ADP20671 130 aa17.37■□□□□ 0.37
CLDN9-201ENST00000445369 MTHFRP42898 656 aa17.37■□□□□ 0.37
CLDN9-201ENST00000445369 NRIP1P48552 1158 aa17.37■□□□□ 0.37
CLDN9-201ENST00000445369 DAG1Q14118 895 aa17.37■□□□□ 0.37
CLDN9-201ENST00000445369 OTUD3Q5T2D3 398 aaPredicted RBP17.37■□□□□ 0.37
CLDN9-201ENST00000445369 ATG9BQ674R7 924 aa17.37■□□□□ 0.37
CLDN9-201ENST00000445369 OR2A12Q8NGT7 310 aa17.37■□□□□ 0.37
CLDN9-201ENST00000445369 FBXO30Q8TB52 745 aa17.37■□□□□ 0.37
CLDN9-201ENST00000445369 SKA2Q8WVK7 121 aaPredicted RBP17.37■□□□□ 0.37
CLDN9-201ENST00000445369 HIC2Q96JB3 615 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms