RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 CHRM5P08912 532 aaPredicted RBP16.91■□□□□ 0.3
SMARCAL1-209ENST00000444508 TPBGLP0DKB5 382 aa16.91■□□□□ 0.3
SMARCAL1-209ENST00000444508 MPC1LP0DKB6 136 aa16.91■□□□□ 0.3
SMARCAL1-209ENST00000444508 NELFEP18615 380 aaKnown RBP16.91■□□□□ 0.3
SMARCAL1-209ENST00000444508 MCM3P25205 808 aa16.91■□□□□ 0.3
SMARCAL1-209ENST00000444508 CD82P27701 267 aa16.91■□□□□ 0.3
SMARCAL1-209ENST00000444508 PRDX3P30048 256 aaKnown RBP16.91■□□□□ 0.3
SMARCAL1-209ENST00000444508 PKLRP30613 574 aa16.91■□□□□ 0.3
SMARCAL1-209ENST00000444508 EIF2S3P41091 472 aaKnown RBP16.91■□□□□ 0.3
SMARCAL1-209ENST00000444508 RGS4P49798 205 aa16.91■□□□□ 0.3
SMARCAL1-209ENST00000444508 HSD11B2P80365 405 aa16.91■□□□□ 0.3
SMARCAL1-209ENST00000444508 ILF2Q12905 390 aaKnown RBP16.91■□□□□ 0.3
SMARCAL1-209ENST00000444508 RBM20Q5T481 1227 aaKnown RBP16.91■□□□□ 0.3
SMARCAL1-209ENST00000444508 LRRC8EQ6NSJ5 796 aa16.91■□□□□ 0.3
SMARCAL1-209ENST00000444508 FAM45BPQ6NSW5 357 aa16.91■□□□□ 0.3
SMARCAL1-209ENST00000444508 CEACAM20Q6UY09 585 aa16.91■□□□□ 0.3
SMARCAL1-209ENST00000444508 CPNE9Q8IYJ1 553 aa16.91■□□□□ 0.3
SMARCAL1-209ENST00000444508 FAM45AQ8TCE6 357 aa16.91■□□□□ 0.3
SMARCAL1-209ENST00000444508 KCNE4Q8WWG9 221 aa16.91■□□□□ 0.3
SMARCAL1-209ENST00000444508 SLC41A2Q96JW4 573 aa16.91■□□□□ 0.3
SMARCAL1-209ENST00000444508 TSPYL1Q9H0U9 437 aa16.91■□□□□ 0.3
SMARCAL1-209ENST00000444508 C1GALT1Q9NS00 363 aa16.91■□□□□ 0.3
SMARCAL1-209ENST00000444508 SOHLH2Q9NX45 425 aa16.91■□□□□ 0.3
SMARCAL1-209ENST00000444508 SIDT1Q9NXL6 827 aaKnown RBP16.91■□□□□ 0.3
SMARCAL1-209ENST00000444508 ACTR10Q9NZ32 417 aa16.91■□□□□ 0.3
SMARCAL1-209ENST00000444508 CIDEBQ9UHD4 219 aa16.91■□□□□ 0.3
SMARCAL1-209ENST00000444508 VWA7Q9Y334 891 aa16.91■□□□□ 0.3
SMARCAL1-209ENST00000444508 PSAT1Q9Y617 370 aa16.91■□□□□ 0.3
SMARCAL1-209ENST00000444508 URB1O60287 2271 aaKnown RBP16.91■□□□□ 0.3
SMARCAL1-209ENST00000444508 TCRBV9S1A1TA0A576 114 aa16.9■□□□□ 0.3
SMARCAL1-209ENST00000444508 POLR1CO15160 346 aaPredicted RBP16.9■□□□□ 0.3
SMARCAL1-209ENST00000444508 SPAG6O75602 509 aa16.9■□□□□ 0.3
SMARCAL1-209ENST00000444508 CATP04040 527 aaKnown RBP16.9■□□□□ 0.3
SMARCAL1-209ENST00000444508 CD9P21926 228 aa16.9■□□□□ 0.3
SMARCAL1-209ENST00000444508 CDKN2DP55273 166 aa16.9■□□□□ 0.3
SMARCAL1-209ENST00000444508 PDAP1Q13442 181 aaKnown RBP16.9■□□□□ 0.3
SMARCAL1-209ENST00000444508 KIR2DS3Q14952 304 aa16.9■□□□□ 0.3
SMARCAL1-209ENST00000444508 TMTC4Q5T4D3 741 aa16.9■□□□□ 0.3
SMARCAL1-209ENST00000444508 HECTD2Q5U5R9 776 aa16.9■□□□□ 0.3
SMARCAL1-209ENST00000444508 ANKS6Q68DC2 871 aa16.9■□□□□ 0.3
SMARCAL1-209ENST00000444508 SPESP1Q6UW49 350 aa16.9■□□□□ 0.3
SMARCAL1-209ENST00000444508 CYS1Q717R9 158 aa16.9■□□□□ 0.3
SMARCAL1-209ENST00000444508 NAF1Q96HR8 494 aaKnown RBP16.9■□□□□ 0.3
SMARCAL1-209ENST00000444508 CTRCQ99895 268 aa16.9■□□□□ 0.3
SMARCAL1-209ENST00000444508 ZPBPQ9BS86 351 aa16.9■□□□□ 0.3
SMARCAL1-209ENST00000444508 FOXJ2Q9P0K8 574 aa16.9■□□□□ 0.3
SMARCAL1-209ENST00000444508 ACSL6Q9UKU0 697 aa16.9■□□□□ 0.3
SMARCAL1-209ENST00000444508 B3GALT1Q9Y5Z6 326 aa16.9■□□□□ 0.3
SMARCAL1-209ENST00000444508 ISM1B1AKI9 464 aa16.89■□□□□ 0.29
SMARCAL1-209ENST00000444508 PSIP1O75475 530 aaKnown RBP16.89■□□□□ 0.29
SMARCAL1-209ENST00000444508 UGT2B7P16662 529 aa16.89■□□□□ 0.29
SMARCAL1-209ENST00000444508 MAP4P27816 1152 aaKnown RBP16.89■□□□□ 0.29
SMARCAL1-209ENST00000444508 STX2P32856 288 aa16.89■□□□□ 0.29
SMARCAL1-209ENST00000444508 GPX6P59796 221 aa16.89■□□□□ 0.29
SMARCAL1-209ENST00000444508 SH3BP2P78314 561 aa16.89■□□□□ 0.29
SMARCAL1-209ENST00000444508 GRB7Q14451 532 aa16.89■□□□□ 0.29
SMARCAL1-209ENST00000444508 ZC3HC1Q86WB0 502 aaKnown RBP16.89■□□□□ 0.29
SMARCAL1-209ENST00000444508 OR2L8Q8NGY9 312 aa16.89■□□□□ 0.29
SMARCAL1-209ENST00000444508 PMEPA1Q969W9 287 aa16.89■□□□□ 0.29
SMARCAL1-209ENST00000444508 SLC22A18Q96BI1 424 aa16.89■□□□□ 0.29
SMARCAL1-209ENST00000444508 ELMO2Q96JJ3 720 aa16.89■□□□□ 0.29
SMARCAL1-209ENST00000444508 PPM1MQ96MI6 270 aa16.89■□□□□ 0.29
SMARCAL1-209ENST00000444508 IL17FQ96PD4 163 aa16.89■□□□□ 0.29
SMARCAL1-209ENST00000444508 OR6C1Q96RD1 312 aa16.89■□□□□ 0.29
SMARCAL1-209ENST00000444508 PITPNM3Q9BZ71 974 aa16.89■□□□□ 0.29
SMARCAL1-209ENST00000444508 LRRC4CQ9HCJ2 640 aa16.89■□□□□ 0.29
SMARCAL1-209ENST00000444508 PDE7BQ9NP56 450 aa16.89■□□□□ 0.29
SMARCAL1-209ENST00000444508 SPHK1Q9NYA1 384 aa16.89■□□□□ 0.29
SMARCAL1-209ENST00000444508 SPATA7Q9P0W8 599 aa16.89■□□□□ 0.29
SMARCAL1-209ENST00000444508 LNPEPQ9UIQ6 1025 aa16.89■□□□□ 0.29
SMARCAL1-209ENST00000444508 PKD1L2Q7Z442 2459 aa16.89■□□□□ 0.29
SMARCAL1-209ENST00000444508 ZZEF1O43149 2961 aa16.89■□□□□ 0.29
SMARCAL1-209ENST00000444508 A0A087WV48 116 aa16.88■□□□□ 0.29
SMARCAL1-209ENST00000444508 FAM95CA0A1B0GW59 222 aa16.88■□□□□ 0.29
SMARCAL1-209ENST00000444508 SLC9B1P1A6NJY1 282 aa16.88■□□□□ 0.29
SMARCAL1-209ENST00000444508 FAM159BA6NKW6 160 aa16.88■□□□□ 0.29
SMARCAL1-209ENST00000444508 ARHGEF33A8MVX0 844 aa16.88■□□□□ 0.29
SMARCAL1-209ENST00000444508 STMND1H3BQB6 276 aa16.88■□□□□ 0.29
SMARCAL1-209ENST00000444508 SAT1P21673 171 aa16.88■□□□□ 0.29
SMARCAL1-209ENST00000444508 FDXRP22570 491 aa16.88■□□□□ 0.29
SMARCAL1-209ENST00000444508 TIAL1Q01085 375 aaKnown RBP eCLIP16.88■□□□□ 0.29
SMARCAL1-209ENST00000444508 ACY1Q03154 408 aa16.88■□□□□ 0.29
SMARCAL1-209ENST00000444508 TUBB3Q13509 450 aa16.88■□□□□ 0.29
SMARCAL1-209ENST00000444508 IL11RAQ14626 422 aa16.88■□□□□ 0.29
SMARCAL1-209ENST00000444508 CCSMST1Q4G0I0 132 aa16.88■□□□□ 0.29
SMARCAL1-209ENST00000444508 FBXO38Q6PIJ6 1188 aa16.88■□□□□ 0.29
SMARCAL1-209ENST00000444508 PAQR3Q6TCH7 311 aa16.88■□□□□ 0.29
SMARCAL1-209ENST00000444508 PIWIL4Q7Z3Z4 852 aaKnown RBP16.88■□□□□ 0.29
SMARCAL1-209ENST00000444508 CTAGE3PQ8IX95 158 aa16.88■□□□□ 0.29
SMARCAL1-209ENST00000444508 IFT20Q8IY31 132 aa16.88■□□□□ 0.29
SMARCAL1-209ENST00000444508 MYO1HQ8N1T3 1032 aa16.88■□□□□ 0.29
SMARCAL1-209ENST00000444508 D2HGDHQ8N465 521 aa16.88■□□□□ 0.29
SMARCAL1-209ENST00000444508 OR9A1PQ8NGU1 263 aa16.88■□□□□ 0.29
SMARCAL1-209ENST00000444508 ASB11Q8WXH4 323 aa16.88■□□□□ 0.29
SMARCAL1-209ENST00000444508 OR2A14Q96R47 310 aa16.88■□□□□ 0.29
SMARCAL1-209ENST00000444508 FMO2Q99518 471 aa16.88■□□□□ 0.29
SMARCAL1-209ENST00000444508 MENTQ9BUN1 341 aa16.88■□□□□ 0.29
SMARCAL1-209ENST00000444508 DPH1Q9BZG8 443 aa16.88■□□□□ 0.29
SMARCAL1-209ENST00000444508 RHOJQ9H4E5 214 aa16.88■□□□□ 0.29
SMARCAL1-209ENST00000444508 APMAPQ9HDC9 416 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms