RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 TEAD1P28347 426 aa7.9□□□□□ -1.14
CCDC39-201ENST00000442201 CCR10P46092 362 aa7.9□□□□□ -1.14
CCDC39-201ENST00000442201 DGKEP52429 567 aa7.9□□□□□ -1.14
CCDC39-201ENST00000442201 ALDH18A1P54886 795 aaKnown RBP7.9□□□□□ -1.14
CCDC39-201ENST00000442201 ZP2Q05996 745 aa7.9□□□□□ -1.14
CCDC39-201ENST00000442201 FGL2Q14314 439 aa7.9□□□□□ -1.14
CCDC39-201ENST00000442201 BCL7AQ4VC05 210 aa7.9□□□□□ -1.14
CCDC39-201ENST00000442201 ANKS6Q68DC2 871 aa7.9□□□□□ -1.14
CCDC39-201ENST00000442201 FRMD7Q6ZUT3 714 aa7.9□□□□□ -1.14
CCDC39-201ENST00000442201 PGBD3Q8N328 593 aa7.9□□□□□ -1.14
CCDC39-201ENST00000442201 PPFIBP2Q8ND30 876 aa7.9□□□□□ -1.14
CCDC39-201ENST00000442201 OR7G1Q8NGA0 311 aa7.9□□□□□ -1.14
CCDC39-201ENST00000442201 AGR3Q8TD06 166 aa7.9□□□□□ -1.14
CCDC39-201ENST00000442201 HMGB4Q8WW32 186 aa7.9□□□□□ -1.14
CCDC39-201ENST00000442201 SLC7A6OSQ96CW6 309 aaPredicted RBP7.9□□□□□ -1.14
CCDC39-201ENST00000442201 COX14Q96I36 57 aa7.9□□□□□ -1.14
CCDC39-201ENST00000442201 COX4I2Q96KJ9 171 aa7.9□□□□□ -1.14
CCDC39-201ENST00000442201 WWP1Q9H0M0 922 aa7.9□□□□□ -1.14
CCDC39-201ENST00000442201 WDR26Q9H7D7 661 aa7.9□□□□□ -1.14
CCDC39-201ENST00000442201 KCNK13Q9HB14 408 aa7.9□□□□□ -1.14
CCDC39-201ENST00000442201 PRDM6Q9NQX0 595 aa7.9□□□□□ -1.14
CCDC39-201ENST00000442201 FAM8A1Q9UBU6 413 aa7.9□□□□□ -1.14
CCDC39-201ENST00000442201 OARD1Q9Y530 152 aa7.9□□□□□ -1.14
CCDC39-201ENST00000442201 CHURC1-FNTBB4DL54 471 aa7.9□□□□□ -1.14
CCDC39-201ENST00000442201 ARHGAP33O14559 1287 aa7.9□□□□□ -1.14
CCDC39-201ENST00000442201 FFAR2O15552 330 aa7.9□□□□□ -1.14
CCDC39-201ENST00000442201 GPC4O75487 556 aa7.9□□□□□ -1.14
CCDC39-201ENST00000442201 UBTFL6P0CB48 400 aaPredicted RBP7.9□□□□□ -1.14
CCDC39-201ENST00000442201 MPC1LP0DKB6 136 aa7.9□□□□□ -1.14
CCDC39-201ENST00000442201 TARSP26639 723 aaKnown RBP7.9□□□□□ -1.14
CCDC39-201ENST00000442201 RPL14P50914 215 aaKnown RBP7.9□□□□□ -1.14
CCDC39-201ENST00000442201 TPMTP51580 245 aa7.9□□□□□ -1.14
CCDC39-201ENST00000442201 HK2P52789 917 aa7.9□□□□□ -1.14
CCDC39-201ENST00000442201 HK3P52790 923 aa7.9□□□□□ -1.14
CCDC39-201ENST00000442201 NAA20P61599 178 aa7.9□□□□□ -1.14
CCDC39-201ENST00000442201 CDK3Q00526 305 aa7.9□□□□□ -1.14
CCDC39-201ENST00000442201 GALNT1Q10472 559 aaPredicted RBP7.9□□□□□ -1.14
CCDC39-201ENST00000442201 INPP5AQ14642 412 aa7.9□□□□□ -1.14
CCDC39-201ENST00000442201 UBXN2BQ14CS0 331 aa7.9□□□□□ -1.14
CCDC39-201ENST00000442201 IRF4Q15306 451 aa7.9□□□□□ -1.14
CCDC39-201ENST00000442201 PPP1R3AQ16821 1122 aa7.9□□□□□ -1.14
CCDC39-201ENST00000442201 UNC50Q53HI1 259 aa7.9□□□□□ -1.14
CCDC39-201ENST00000442201 SYT13Q7L8C5 426 aa7.9□□□□□ -1.14
CCDC39-201ENST00000442201 CPSF7Q8N684 471 aaKnown RBP7.9□□□□□ -1.14
CCDC39-201ENST00000442201 MAFAQ8NHW3 353 aaPredicted RBP7.9□□□□□ -1.14
CCDC39-201ENST00000442201 ASB2Q96Q27 587 aa7.9□□□□□ -1.14
CCDC39-201ENST00000442201 CTRCQ99895 268 aa7.9□□□□□ -1.14
CCDC39-201ENST00000442201 SHCBP1LQ9BZQ2 653 aa7.9□□□□□ -1.14
CCDC39-201ENST00000442201 BTBD1Q9H0C5 482 aa7.9□□□□□ -1.14
CCDC39-201ENST00000442201 GSTO2Q9H4Y5 243 aa7.9□□□□□ -1.14
CCDC39-201ENST00000442201 MBNL1Q9NR56 388 aaKnown RBP7.9□□□□□ -1.14
CCDC39-201ENST00000442201 PHPT1Q9NRX4 125 aaPredicted RBP7.9□□□□□ -1.14
CCDC39-201ENST00000442201 HAO1Q9UJM8 370 aa7.9□□□□□ -1.14
CCDC39-201ENST00000442201 GPR34Q9UPC5 381 aa7.9□□□□□ -1.14
CCDC39-201ENST00000442201 SPTBN5Q9NRC6 3674 aaKnown RBP7.9□□□□□ -1.15
CCDC39-201ENST00000442201 PABPN1LA6NDY0 278 aaKnown RBP7.9□□□□□ -1.15
CCDC39-201ENST00000442201 SLCO1B7G3V0H7 640 aa7.9□□□□□ -1.15
CCDC39-201ENST00000442201 SLCO2B1O94956 709 aa7.9□□□□□ -1.15
CCDC39-201ENST00000442201 C8GP07360 202 aa7.9□□□□□ -1.15
CCDC39-201ENST00000442201 GSTM1P09488 218 aa7.9□□□□□ -1.15
CCDC39-201ENST00000442201 VCLP18206 1134 aa7.9□□□□□ -1.15
CCDC39-201ENST00000442201 EEF1DP29692 281 aaKnown RBP7.9□□□□□ -1.15
CCDC39-201ENST00000442201 PBLDP30039 288 aaPredicted RBP7.9□□□□□ -1.15
CCDC39-201ENST00000442201 MAT2AP31153 395 aaKnown RBP7.9□□□□□ -1.15
CCDC39-201ENST00000442201 TRIM23P36406 574 aa7.9□□□□□ -1.15
CCDC39-201ENST00000442201 TTC23LQ6PF05 361 aa7.9□□□□□ -1.15
CCDC39-201ENST00000442201 TP53I13Q8NBR0 393 aaPredicted RBP7.9□□□□□ -1.15
CCDC39-201ENST00000442201 ASB12Q8WXK4 309 aa7.9□□□□□ -1.15
CCDC39-201ENST00000442201 GLMNQ92990 594 aa7.9□□□□□ -1.15
CCDC39-201ENST00000442201 NMD3Q96D46 503 aaKnown RBP7.9□□□□□ -1.15
CCDC39-201ENST00000442201 LRRC37BQ96QE4 947 aa7.9□□□□□ -1.15
CCDC39-201ENST00000442201 NELL2Q99435 816 aa7.9□□□□□ -1.15
CCDC39-201ENST00000442201 EGFL8Q99944 293 aa7.9□□□□□ -1.15
CCDC39-201ENST00000442201 TEX101Q9BY14 249 aa7.9□□□□□ -1.15
CCDC39-201ENST00000442201 TRIM54Q9BYV2 358 aa7.9□□□□□ -1.15
CCDC39-201ENST00000442201 STN1Q9H668 368 aaKnown RBP7.9□□□□□ -1.15
CCDC39-201ENST00000442201 RDH14Q9HBH5 336 aa7.9□□□□□ -1.15
CCDC39-201ENST00000442201 AASDHPPTQ9NRN7 309 aa7.9□□□□□ -1.15
CCDC39-201ENST00000442201 ADAMTS6Q9UKP5 1117 aa7.9□□□□□ -1.15
CCDC39-201ENST00000442201 CDYLQ9Y232 598 aa7.9□□□□□ -1.15
CCDC39-201ENST00000442201 TNPO3Q9Y5L0 923 aaKnown RBP7.9□□□□□ -1.15
CCDC39-201ENST00000442201 PLXNA2O75051 1894 aa7.89□□□□□ -1.15
CCDC39-201ENST00000442201 KRBA1A5PL33 1030 aa7.89□□□□□ -1.15
CCDC39-201ENST00000442201 TMEM202A6NGA9 273 aa7.89□□□□□ -1.15
CCDC39-201ENST00000442201 LRRC72A6NJI9 287 aa7.89□□□□□ -1.15
CCDC39-201ENST00000442201 HGSO14964 777 aaPredicted RBP7.89□□□□□ -1.15
CCDC39-201ENST00000442201 HDAC3O15379 428 aa7.89□□□□□ -1.15
CCDC39-201ENST00000442201 SLC31A1O15431 190 aa7.89□□□□□ -1.15
CCDC39-201ENST00000442201 GUCA1CO95843 209 aa7.89□□□□□ -1.15
CCDC39-201ENST00000442201 ZCCHC18P0CG32 403 aa7.89□□□□□ -1.15
CCDC39-201ENST00000442201 ZNF8P17098 575 aaPredicted RBP7.89□□□□□ -1.15
CCDC39-201ENST00000442201 ACSL1P33121 698 aa7.89□□□□□ -1.15
CCDC39-201ENST00000442201 BCAP31P51572 246 aa7.89□□□□□ -1.15
CCDC39-201ENST00000442201 CDH13P55290 713 aa7.89□□□□□ -1.15
CCDC39-201ENST00000442201 PHKG1Q16816 387 aa7.89□□□□□ -1.15
CCDC39-201ENST00000442201 DOK6Q6PKX4 331 aa7.89□□□□□ -1.15
CCDC39-201ENST00000442201 UBE2R2Q712K3 238 aaPredicted RBP7.89□□□□□ -1.15
CCDC39-201ENST00000442201 RPS27LQ71UM5 84 aaKnown RBP7.89□□□□□ -1.15
CCDC39-201ENST00000442201 VRK3Q8IV63 474 aa7.89□□□□□ -1.15
CCDC39-201ENST00000442201 ZNF687Q8N1G0 1237 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms