RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 BFARQ9NZS9 450 aa7.52□□□□□ -1.2
CD44-211ENST00000442151 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.52□□□□□ -1.2
CD44-211ENST00000442151 TCFL5Q9UL49 500 aa7.52□□□□□ -1.2
CD44-211ENST00000442151 SLC39A10Q9ULF5 831 aa7.52□□□□□ -1.2
CD44-211ENST00000442151 BTN3A1O00481 513 aa7.52□□□□□ -1.21
CD44-211ENST00000442151 DDX3YO15523 660 aaKnown RBP7.52□□□□□ -1.21
CD44-211ENST00000442151 OR2B3O76000 313 aa7.52□□□□□ -1.21
CD44-211ENST00000442151 TMEM63AO94886 807 aa7.52□□□□□ -1.21
CD44-211ENST00000442151 IFNB1P01574 187 aa7.52□□□□□ -1.21
CD44-211ENST00000442151 PAMP19021 973 aa7.52□□□□□ -1.21
CD44-211ENST00000442151 CCNFP41002 786 aa7.52□□□□□ -1.21
CD44-211ENST00000442151 CD97P48960 835 aa7.52□□□□□ -1.21
CD44-211ENST00000442151 PRKG2Q13237 762 aa7.52□□□□□ -1.21
CD44-211ENST00000442151 KLF1Q13351 362 aaPredicted RBP7.52□□□□□ -1.21
CD44-211ENST00000442151 CCNG2Q16589 344 aa7.52□□□□□ -1.21
CD44-211ENST00000442151 PCID2Q5JVF3 399 aa7.52□□□□□ -1.21
CD44-211ENST00000442151 COLEC12Q5KU26 742 aa7.52□□□□□ -1.21
CD44-211ENST00000442151 PAPD7Q5XG87 772 aaKnown RBP7.52□□□□□ -1.21
CD44-211ENST00000442151 PTRHD1Q6GMV3 140 aaKnown RBP7.52□□□□□ -1.21
CD44-211ENST00000442151 DUS1LQ6P1R4 473 aaKnown RBP7.52□□□□□ -1.21
CD44-211ENST00000442151 GSTA5Q7RTV2 222 aa7.52□□□□□ -1.21
CD44-211ENST00000442151 SYTL1Q8IYJ3 562 aa7.52□□□□□ -1.21
CD44-211ENST00000442151 ENDOVQ8N8Q3 282 aaKnown RBP7.52□□□□□ -1.21
CD44-211ENST00000442151 C19orf47Q8N9M1 422 aaKnown RBP7.52□□□□□ -1.21
CD44-211ENST00000442151 GLIS1Q8NBF1 620 aa7.52□□□□□ -1.21
CD44-211ENST00000442151 CLEC1AQ8NC01 280 aa7.52□□□□□ -1.21
CD44-211ENST00000442151 GALNT11Q8NCW6 608 aa7.52□□□□□ -1.21
CD44-211ENST00000442151 GABPB2Q8TAK5 448 aaPredicted RBP7.52□□□□□ -1.21
CD44-211ENST00000442151 ALG3Q92685 438 aa7.52□□□□□ -1.21
CD44-211ENST00000442151 HDAC10Q969S8 669 aa7.52□□□□□ -1.21
CD44-211ENST00000442151 ZUFSPQ96AP4 578 aa7.52□□□□□ -1.21
CD44-211ENST00000442151 RAD51AP1Q96B01 352 aa7.52□□□□□ -1.21
CD44-211ENST00000442151 PTERQ96BW5 349 aa7.52□□□□□ -1.21
CD44-211ENST00000442151 KRTAP4-12Q9BQ66 201 aa7.52□□□□□ -1.21
CD44-211ENST00000442151 GORASP1Q9BQQ3 440 aa7.52□□□□□ -1.21
CD44-211ENST00000442151 HGH1Q9BTY7 390 aa7.52□□□□□ -1.21
CD44-211ENST00000442151 ETNK1Q9HBU6 452 aa7.52□□□□□ -1.21
CD44-211ENST00000442151 SLAMF7Q9NQ25 335 aa7.52□□□□□ -1.21
CD44-211ENST00000442151 IFT80Q9P2H3 777 aaPredicted RBP7.52□□□□□ -1.21
CD44-211ENST00000442151 GNPTGQ9UJJ9 305 aa7.52□□□□□ -1.21
CD44-211ENST00000442151 TFR2Q9UP52 801 aa7.52□□□□□ -1.21
CD44-211ENST00000442151 TDRKHQ9Y2W6 561 aaKnown RBP7.52□□□□□ -1.21
CD44-211ENST00000442151 ASH1LQ9NR48 2969 aaKnown RBP7.52□□□□□ -1.21
CD44-211ENST00000442151 SLC5A10A0PJK1 596 aa7.51□□□□□ -1.21
CD44-211ENST00000442151 CCDC162PA2VCL2 907 aa7.51□□□□□ -1.21
CD44-211ENST00000442151 ARGFXA6NJG6 315 aa7.51□□□□□ -1.21
CD44-211ENST00000442151 ZNF839A8K0R7 811 aa7.51□□□□□ -1.21
CD44-211ENST00000442151 BTN3A3O00478 584 aa7.51□□□□□ -1.21
CD44-211ENST00000442151 ZNF749O43361 778 aa7.51□□□□□ -1.21
CD44-211ENST00000442151 LIASO43766 372 aa7.51□□□□□ -1.21
CD44-211ENST00000442151 NDUFS3O75489 264 aa7.51□□□□□ -1.21
CD44-211ENST00000442151 TIAF1O95411 115 aa7.51□□□□□ -1.21
CD44-211ENST00000442151 FTCDO95954 541 aa7.51□□□□□ -1.21
CD44-211ENST00000442151 ALBP02768 609 aa7.51□□□□□ -1.21
CD44-211ENST00000442151 CHRM5P08912 532 aaPredicted RBP7.51□□□□□ -1.21
CD44-211ENST00000442151 ACADLP28330 430 aa7.51□□□□□ -1.21
CD44-211ENST00000442151 RORAP35398 523 aa7.51□□□□□ -1.21
CD44-211ENST00000442151 FOLR3P41439 243 aa7.51□□□□□ -1.21
CD44-211ENST00000442151 ARCN1P48444 511 aaKnown RBP7.51□□□□□ -1.21
CD44-211ENST00000442151 RAB28P51157 221 aa7.51□□□□□ -1.21
CD44-211ENST00000442151 PPP1CAP62136 330 aa7.51□□□□□ -1.21
CD44-211ENST00000442151 GPS2Q13227 327 aa7.51□□□□□ -1.21
CD44-211ENST00000442151 NCF4Q15080 339 aa7.51□□□□□ -1.21
CD44-211ENST00000442151 KYNUQ16719 465 aa7.51□□□□□ -1.21
CD44-211ENST00000442151 RNF187Q5TA31 235 aaPredicted RBP7.51□□□□□ -1.21
CD44-211ENST00000442151 FHL5Q5TD97 284 aa7.51□□□□□ -1.21
CD44-211ENST00000442151 MLIPQ5VWP3 458 aa7.51□□□□□ -1.21
CD44-211ENST00000442151 MRNIPQ6NTE8 343 aa7.51□□□□□ -1.21
CD44-211ENST00000442151 RHBDD2Q6NTF9 364 aa7.51□□□□□ -1.21
CD44-211ENST00000442151 FAM199XQ6PEV8 388 aaPredicted RBP7.51□□□□□ -1.21
CD44-211ENST00000442151 DRICH1Q6PGQ1 229 aaPredicted RBP7.51□□□□□ -1.21
CD44-211ENST00000442151 UNC5AQ6ZN44 842 aa7.51□□□□□ -1.21
CD44-211ENST00000442151 SLC13A5Q86YT5 568 aaPredicted RBP7.51□□□□□ -1.21
CD44-211ENST00000442151 ADGRF3Q8IZF5 1079 aa7.51□□□□□ -1.21
CD44-211ENST00000442151 TTC29Q8NA56 475 aaPredicted RBP7.51□□□□□ -1.21
CD44-211ENST00000442151 ACRBPQ8NEB7 543 aa7.51□□□□□ -1.21
CD44-211ENST00000442151 OR52K1Q8NGK4 314 aa7.51□□□□□ -1.21
CD44-211ENST00000442151 TCF12Q99081 682 aa7.51□□□□□ -1.21
CD44-211ENST00000442151 FAM118BQ9BPY3 351 aa7.51□□□□□ -1.21
CD44-211ENST00000442151 TLR10Q9BXR5 811 aa7.51□□□□□ -1.21
CD44-211ENST00000442151 IL22Q9GZX6 179 aa7.51□□□□□ -1.21
CD44-211ENST00000442151 RBSNQ9H1K0 784 aa7.51□□□□□ -1.21
CD44-211ENST00000442151 PRDM9Q9NQV7 894 aa7.51□□□□□ -1.21
CD44-211ENST00000442151 EIF2B3Q9NR50 452 aaKnown RBP7.51□□□□□ -1.21
CD44-211ENST00000442151 RAB6BQ9NRW1 208 aa7.51□□□□□ -1.21
CD44-211ENST00000442151 CATSPERZQ9NTU4 200 aa7.51□□□□□ -1.21
CD44-211ENST00000442151 PCMTD2Q9NV79 361 aa7.51□□□□□ -1.21
CD44-211ENST00000442151 REXO2Q9Y3B8 237 aaKnown RBP7.51□□□□□ -1.21
CD44-211ENST00000442151 KALRNO60229 2985 aa7.51□□□□□ -1.21
CD44-211ENST00000442151 ZNF106Q9H2Y7 1883 aaKnown RBP7.51□□□□□ -1.21
CD44-211ENST00000442151 MAGEB16A2A368 324 aa7.5□□□□□ -1.21
CD44-211ENST00000442151 TARM1B6A8C7 271 aa7.5□□□□□ -1.21
CD44-211ENST00000442151 PRMT5O14744 637 aaPredicted RBP7.5□□□□□ -1.21
CD44-211ENST00000442151 ZSCAN9O15535 394 aaPredicted RBP7.5□□□□□ -1.21
CD44-211ENST00000442151 GPR39O43194 453 aa7.5□□□□□ -1.21
CD44-211ENST00000442151 SRPX2O60687 465 aaPredicted RBP7.5□□□□□ -1.21
CD44-211ENST00000442151 CEACAM4O75871 244 aa7.5□□□□□ -1.21
CD44-211ENST00000442151 GOT2P00505 430 aaKnown RBP7.5□□□□□ -1.21
CD44-211ENST00000442151 APRTP07741 180 aa7.5□□□□□ -1.21
CD44-211ENST00000442151 ST6GAL1P15907 406 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms