RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 ITM2CQ9NQX7 267 aa12.84□□□□□ -0.35
CPSF4-206ENST00000441580 C1orf109Q9NX04 203 aa12.84□□□□□ -0.35
CPSF4-206ENST00000441580 GPRC5BQ9NZH0 403 aa12.84□□□□□ -0.35
CPSF4-206ENST00000441580 STOX2Q9P2F5 926 aaPredicted RBP12.84□□□□□ -0.35
CPSF4-206ENST00000441580 PSMD13Q9UNM6 376 aa12.84□□□□□ -0.35
CPSF4-206ENST00000441580 TMED5Q9Y3A6 229 aa12.84□□□□□ -0.35
CPSF4-206ENST00000441580 RNF11Q9Y3C5 154 aa12.84□□□□□ -0.35
CPSF4-206ENST00000441580 CCL27Q9Y4X3 112 aa12.84□□□□□ -0.35
CPSF4-206ENST00000441580 TMEM202A6NGA9 273 aa12.83□□□□□ -0.36
CPSF4-206ENST00000441580 FXYD1O00168 92 aa12.83□□□□□ -0.36
CPSF4-206ENST00000441580 MID1O15344 667 aa12.83□□□□□ -0.36
CPSF4-206ENST00000441580 C8BP07358 591 aa12.83□□□□□ -0.36
CPSF4-206ENST00000441580 HSD3B1P14060 373 aa12.83□□□□□ -0.36
CPSF4-206ENST00000441580 HSD17B1P14061 328 aa12.83□□□□□ -0.36
CPSF4-206ENST00000441580 HSD3B2P26439 372 aa12.83□□□□□ -0.36
CPSF4-206ENST00000441580 DRD3P35462 400 aa12.83□□□□□ -0.36
CPSF4-206ENST00000441580 BDKRB1P46663 353 aa12.83□□□□□ -0.36
CPSF4-206ENST00000441580 CLNS1AP54105 237 aaKnown RBP12.83□□□□□ -0.36
CPSF4-206ENST00000441580 HTR4Q13639 388 aa12.83□□□□□ -0.36
CPSF4-206ENST00000441580 TRIM25Q14258 630 aaKnown RBP12.83□□□□□ -0.36
CPSF4-206ENST00000441580 VPS26BQ4G0F5 336 aa12.83□□□□□ -0.36
CPSF4-206ENST00000441580 TIGD2Q4W5G0 525 aa12.83□□□□□ -0.36
CPSF4-206ENST00000441580 IRAK1BP1Q5VVH5 260 aa12.83□□□□□ -0.36
CPSF4-206ENST00000441580 KIAA1161Q6NSJ0 714 aa12.83□□□□□ -0.36
CPSF4-206ENST00000441580 AGTRAPQ6RW13 159 aa12.83□□□□□ -0.36
CPSF4-206ENST00000441580 TDHQ8IZJ6 230 aa12.83□□□□□ -0.36
CPSF4-206ENST00000441580 OXR1Q8N573 874 aa12.83□□□□□ -0.36
CPSF4-206ENST00000441580 DPP10Q8N608 796 aa12.83□□□□□ -0.36
CPSF4-206ENST00000441580 BHLHE22Q8NFJ8 381 aaPredicted RBP12.83□□□□□ -0.36
CPSF4-206ENST00000441580 OR2T3Q8NH03 318 aa12.83□□□□□ -0.36
CPSF4-206ENST00000441580 OR2L2Q8NH16 312 aa12.83□□□□□ -0.36
CPSF4-206ENST00000441580 SELENOMQ8WWX9 145 aa12.83□□□□□ -0.36
CPSF4-206ENST00000441580 PYDC1Q8WXC3 89 aa12.83□□□□□ -0.36
CPSF4-206ENST00000441580 COX14Q96I36 57 aa12.83□□□□□ -0.36
CPSF4-206ENST00000441580 C1QTNF7Q9BXJ2 289 aa12.83□□□□□ -0.36
CPSF4-206ENST00000441580 FAM8A1Q9UBU6 413 aa12.83□□□□□ -0.36
CPSF4-206ENST00000441580 HCN2Q9UL51 889 aa12.83□□□□□ -0.36
CPSF4-206ENST00000441580 ANKRD12Q6UB98 2062 aa12.83□□□□□ -0.36
CPSF4-206ENST00000441580 MGAT4DA6NG13 374 aa12.82□□□□□ -0.36
CPSF4-206ENST00000441580 PLK4O00444 970 aa12.82□□□□□ -0.36
CPSF4-206ENST00000441580 ACOT8O14734 319 aa12.82□□□□□ -0.36
CPSF4-206ENST00000441580 CASQ2O14958 399 aaPredicted RBP12.82□□□□□ -0.36
CPSF4-206ENST00000441580 CLGNO14967 610 aa12.82□□□□□ -0.36
CPSF4-206ENST00000441580 SORBS2O94875 1100 aaKnown RBP12.82□□□□□ -0.36
CPSF4-206ENST00000441580 BAG2O95816 211 aa12.82□□□□□ -0.36
CPSF4-206ENST00000441580 RPN2P04844 631 aa12.82□□□□□ -0.36
CPSF4-206ENST00000441580 G6PDP11413 515 aa12.82□□□□□ -0.36
CPSF4-206ENST00000441580 PRPS2P11908 318 aa12.82□□□□□ -0.36
CPSF4-206ENST00000441580 SLC2A4P14672 509 aa12.82□□□□□ -0.36
CPSF4-206ENST00000441580 ATP6V1C1P21283 382 aa12.82□□□□□ -0.36
CPSF4-206ENST00000441580 ITPKAP23677 461 aa12.82□□□□□ -0.36
CPSF4-206ENST00000441580 VARSP26640 1264 aaKnown RBP12.82□□□□□ -0.36
CPSF4-206ENST00000441580 BMP8BP34820 402 aa12.82□□□□□ -0.36
CPSF4-206ENST00000441580 HNF4AP41235 474 aa12.82□□□□□ -0.36
CPSF4-206ENST00000441580 HALP42357 657 aa12.82□□□□□ -0.36
CPSF4-206ENST00000441580 PFN3P60673 137 aa12.82□□□□□ -0.36
CPSF4-206ENST00000441580 UFM1P61960 85 aa12.82□□□□□ -0.36
CPSF4-206ENST00000441580 IL23RQ5VWK5 629 aa12.82□□□□□ -0.36
CPSF4-206ENST00000441580 SDE2Q6IQ49 451 aa12.82□□□□□ -0.36
CPSF4-206ENST00000441580 GRHL2Q6ISB3 625 aa12.82□□□□□ -0.36
CPSF4-206ENST00000441580 NEK5Q6P3R8 708 aa12.82□□□□□ -0.36
CPSF4-206ENST00000441580 TRIM74Q86UV6 250 aa12.82□□□□□ -0.36
CPSF4-206ENST00000441580 THOC6Q86W42 341 aaKnown RBP12.82□□□□□ -0.36
CPSF4-206ENST00000441580 HEATR4Q86WZ0 1026 aa12.82□□□□□ -0.36
CPSF4-206ENST00000441580 AADATQ8N5Z0 425 aa12.82□□□□□ -0.36
CPSF4-206ENST00000441580 EFCAB3Q8N7B9 438 aa12.82□□□□□ -0.36
CPSF4-206ENST00000441580 GOLM1Q8NBJ4 401 aa12.82□□□□□ -0.36
CPSF4-206ENST00000441580 CATSPER1Q8NEC5 780 aa12.82□□□□□ -0.36
CPSF4-206ENST00000441580 OR56A3Q8NH54 315 aa12.82□□□□□ -0.36
CPSF4-206ENST00000441580 LRRC58Q96CX6 371 aa12.82□□□□□ -0.36
CPSF4-206ENST00000441580 CMTM7Q96FZ5 175 aa12.82□□□□□ -0.36
CPSF4-206ENST00000441580 METTL2AQ96IZ6 378 aaKnown RBP12.82□□□□□ -0.36
CPSF4-206ENST00000441580 ZNF184Q99676 751 aaPredicted RBP12.82□□□□□ -0.36
CPSF4-206ENST00000441580 GABRG3Q99928 467 aa12.82□□□□□ -0.36
CPSF4-206ENST00000441580 ACPTQ9BZG2 426 aa12.82□□□□□ -0.36
CPSF4-206ENST00000441580 SLC52A3Q9NQ40 469 aa12.82□□□□□ -0.36
CPSF4-206ENST00000441580 CLDND1Q9NY35 253 aa12.82□□□□□ -0.36
CPSF4-206ENST00000441580 ATXN10Q9UBB4 475 aa12.82□□□□□ -0.36
CPSF4-206ENST00000441580 CD300AQ9UGN4 299 aa12.82□□□□□ -0.36
CPSF4-206ENST00000441580 LRRC42Q9Y546 428 aa12.82□□□□□ -0.36
CPSF4-206ENST00000441580 ANHXE9PGG2 379 aa12.81□□□□□ -0.36
CPSF4-206ENST00000441580 H3BNX3 289 aa12.81□□□□□ -0.36
CPSF4-206ENST00000441580 K7ESM1 405 aa12.81□□□□□ -0.36
CPSF4-206ENST00000441580 ANKRD28O15084 1053 aa12.81□□□□□ -0.36
CPSF4-206ENST00000441580 C1orf105O95561 183 aa12.81□□□□□ -0.36
CPSF4-206ENST00000441580 PCCBP05166 539 aa12.81□□□□□ -0.36
CPSF4-206ENST00000441580 IMPA1P29218 277 aa12.81□□□□□ -0.36
CPSF4-206ENST00000441580 KIR2DL1P43626 348 aaPredicted RBP12.81□□□□□ -0.36
CPSF4-206ENST00000441580 ZFP36L2P47974 494 aaKnown RBP12.81□□□□□ -0.36
CPSF4-206ENST00000441580 EEFSECP57772 596 aaKnown RBP12.81□□□□□ -0.36
CPSF4-206ENST00000441580 CDK3Q00526 305 aa12.81□□□□□ -0.36
CPSF4-206ENST00000441580 IRF8Q02556 426 aa12.81□□□□□ -0.36
CPSF4-206ENST00000441580 ABRQ12979 859 aa12.81□□□□□ -0.36
CPSF4-206ENST00000441580 CHIT1Q13231 466 aa12.81□□□□□ -0.36
CPSF4-206ENST00000441580 CPSF6Q16630 551 aaKnown RBP eCLIP12.81□□□□□ -0.36
CPSF4-206ENST00000441580 C6orf10Q5SRN2 563 aa12.81□□□□□ -0.36
CPSF4-206ENST00000441580 FRG2Q64ET8 278 aa12.81□□□□□ -0.36
CPSF4-206ENST00000441580 CAPN13Q6MZZ7 669 aaPredicted RBP12.81□□□□□ -0.36
CPSF4-206ENST00000441580 PNCKQ6P2M8 343 aa12.81□□□□□ -0.36
CPSF4-206ENST00000441580 CRTC3Q6UUV7 619 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms