RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 ZSCAN5DPP0CG00 497 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 TMIGD3P0DMS9 266 aaPredicted RBP3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 GHRP10912 638 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 TFEBP19484 476 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 CYP3A5P20815 502 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 TGM2P21980 687 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 SERPINA4P29622 427 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 SDC4P31431 198 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 STX2P32856 288 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 HTR7P34969 479 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 THBS4P35443 961 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 GNL1P36915 607 aaPredicted RBP3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 PNPLA4P41247 253 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 ACADSBP45954 432 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 ATP5OP48047 213 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 IFNAR2P48551 515 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 RGS7P49802 495 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 SLC18A1P54219 525 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 CDH6P55285 790 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 WDR5P61964 334 aaKnown RBP3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 IL9RQ01113 521 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 ROR1Q01973 937 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 RNASELQ05823 741 aaKnown RBP3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 ACTN3Q08043 901 aaPredicted RBP3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 PDIA2Q13087 525 aaKnown RBP3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 DPYSL3Q14195 570 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 ERV3-1Q14264 604 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 RASA2Q15283 850 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 TMED2Q15363 201 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 SMTNL2Q2TAL5 461 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 KLHL38Q2WGJ6 581 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 CCDC14Q49A88 953 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 TTC31Q49AM3 519 aaPredicted RBP3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 LACTB2Q53H82 288 aaPredicted RBP3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 ANKRD20A8PQ5CZ79 823 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 XKR4Q5GH76 650 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 WDR45BQ5MNZ6 344 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 PRAMEF19Q5SWL8 479 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 C9orf57Q5W0N0 161 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 PMF1Q6P1K2 205 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 SCYL2Q6P3W7 929 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 ALKAL1Q6UXT8 129 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 C4orf22Q6V702 233 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 PPP1R21Q6ZMI0 780 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 FAM183BPQ6ZVS7 135 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 KRT77Q7Z794 578 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 GALNT5Q7Z7M9 940 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 ACOT1Q86TX2 421 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 VSIG1Q86XK7 387 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 TDRPQ86YL5 185 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 UNC45BQ8IWX7 931 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 ZBED8Q8IZ13 594 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 CRYBG2Q8N1P7 616 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 NAT8LQ8N9F0 302 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 SPATA18Q8TC71 538 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 MGARPQ8TDB4 240 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 PYROXD1Q8WU10 500 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 SLC35F5Q8WV83 523 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 TEKT4Q8WW24 435 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 CKAP2Q8WWK9 683 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 PIGKQ92643 395 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 USP6NLQ92738 828 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 KAT2BQ92831 832 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 LYZL4Q96KX0 146 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 MAGEB18Q96M61 343 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 ZNF560Q96MR9 790 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 ZMAT2Q96NC0 199 aaKnown RBP3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 RNF157Q96PX1 679 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 PEBP4Q96S96 227 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 CALN1Q9BXU9 219 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 TRIM6Q9C030 488 aaPredicted RBP3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 SNX25Q9H3E2 840 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 ACTR5Q9H9F9 607 aaPredicted RBP3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 CHODLQ9H9P2 273 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 NSMCE4AQ9NXX6 385 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 EURLQ9NYK6 297 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 NDUFAF4Q9P032 175 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 SENP1Q9P0U3 644 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 PAK5Q9P286 719 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 FETUBQ9UGM5 382 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 TBK1Q9UHD2 729 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 IPO11Q9UI26 975 aaKnown RBP3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 SLC24A2Q9UI40 661 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 XPO7Q9UIA9 1087 aaKnown RBP3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 KCND3Q9UK17 655 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 GPR34Q9UPC5 381 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 GINS2Q9Y248 185 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 Q9Y3F1 56 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 CAPN7Q9Y6W3 813 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 DOCK5Q9H7D0 1870 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 LRRC37A2A6NM11 1700 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 KIAA1217Q5T5P2 1943 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 DICER1Q9UPY3 1922 aaKnown RBP3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 OTOFQ9HC10 1997 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 SMIM28A0A1B0GU29 152 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 GXYLT2A0PJZ3 443 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 BCLAF3A2AJT9 711 aaKnown RBP3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms