RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 KIF5CO60282 957 aa19.18■□□□□ 0.66
SHROOM1-204ENST00000440118 RFPL1O75677 317 aa19.18■□□□□ 0.66
SHROOM1-204ENST00000440118 OR2B3O76000 313 aa19.18■□□□□ 0.66
SHROOM1-204ENST00000440118 HBQ1P09105 142 aa19.18■□□□□ 0.66
SHROOM1-204ENST00000440118 MSL3P1P0C860 447 aa19.18■□□□□ 0.66
SHROOM1-204ENST00000440118 ATXN8OSP0DMR3 200 aa19.18■□□□□ 0.66
SHROOM1-204ENST00000440118 AGXTP21549 392 aa19.18■□□□□ 0.66
SHROOM1-204ENST00000440118 PKLRP30613 574 aa19.18■□□□□ 0.66
SHROOM1-204ENST00000440118 LACTB2Q53H82 288 aaPredicted RBP19.18■□□□□ 0.66
SHROOM1-204ENST00000440118 CCDC137Q6PK04 289 aaKnown RBP19.18■□□□□ 0.66
SHROOM1-204ENST00000440118 TMEM135Q86UB9 458 aa19.18■□□□□ 0.66
SHROOM1-204ENST00000440118 SYTL1Q8IYJ3 562 aa19.18■□□□□ 0.66
SHROOM1-204ENST00000440118 OR2A14Q96R47 310 aa19.18■□□□□ 0.66
SHROOM1-204ENST00000440118 AKIRIN1Q9H9L7 192 aaPredicted RBP19.18■□□□□ 0.66
SHROOM1-204ENST00000440118 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.18■□□□□ 0.66
SHROOM1-204ENST00000440118 TSR3Q9UJK0 312 aaKnown RBP19.18■□□□□ 0.66
SHROOM1-204ENST00000440118 FARSAQ9Y285 508 aaKnown RBP19.18■□□□□ 0.66
SHROOM1-204ENST00000440118 MRFAP1Q9Y605 127 aa19.18■□□□□ 0.66
SHROOM1-204ENST00000440118 SEC16AO15027 2179 aa19.17■□□□□ 0.66
SHROOM1-204ENST00000440118 SETXQ7Z333 2677 aaKnown RBP19.17■□□□□ 0.66
SHROOM1-204ENST00000440118 GOLGA8MH3BSY2 632 aa19.17■□□□□ 0.66
SHROOM1-204ENST00000440118 AVILO75366 819 aa19.17■□□□□ 0.66
SHROOM1-204ENST00000440118 ZIC2O95409 532 aaPredicted RBP19.17■□□□□ 0.66
SHROOM1-204ENST00000440118 FURINP09958 794 aa19.17■□□□□ 0.66
SHROOM1-204ENST00000440118 RPS3P23396 243 aaKnown RBP eCLIP19.17■□□□□ 0.663e-7■■■■■ 39.2
SHROOM1-204ENST00000440118 AOAHP28039 575 aa19.17■□□□□ 0.66
SHROOM1-204ENST00000440118 DEKP35659 375 aaKnown RBP19.17■□□□□ 0.66
SHROOM1-204ENST00000440118 KIAA0930Q6ICG6 404 aaPredicted RBP19.17■□□□□ 0.66
SHROOM1-204ENST00000440118 TTC27Q6P3X3 843 aa19.17■□□□□ 0.66
SHROOM1-204ENST00000440118 DSELQ8IZU8 1212 aa19.17■□□□□ 0.66
SHROOM1-204ENST00000440118 SLC35F6Q8N357 371 aa19.17■□□□□ 0.66
SHROOM1-204ENST00000440118 RASGEF1CQ8N431 466 aa19.17■□□□□ 0.66
SHROOM1-204ENST00000440118 ENDOVQ8N8Q3 282 aaKnown RBP19.17■□□□□ 0.66
SHROOM1-204ENST00000440118 SLC38A9Q8NBW4 561 aa19.17■□□□□ 0.66
SHROOM1-204ENST00000440118 GRK7Q8WTQ7 553 aa19.17■□□□□ 0.66
SHROOM1-204ENST00000440118 ANP32BQ92688 251 aaKnown RBP19.17■□□□□ 0.66
SHROOM1-204ENST00000440118 ZNF669Q96BR6 464 aaPredicted RBP19.17■□□□□ 0.66
SHROOM1-204ENST00000440118 ABHD17AQ96GS6 310 aa19.17■□□□□ 0.66
SHROOM1-204ENST00000440118 RAB11FIP5Q9BXF6 653 aa19.17■□□□□ 0.66
SHROOM1-204ENST00000440118 P2RY12Q9H244 342 aa19.17■□□□□ 0.66
SHROOM1-204ENST00000440118 XAB2Q9HCS7 855 aaKnown RBP19.17■□□□□ 0.66
SHROOM1-204ENST00000440118 VPS9D1Q9Y2B5 631 aa19.17■□□□□ 0.66
SHROOM1-204ENST00000440118 PADI2Q9Y2J8 665 aa19.17■□□□□ 0.66
SHROOM1-204ENST00000440118 TENM4Q6N022 2769 aa19.17■□□□□ 0.66
SHROOM1-204ENST00000440118 E5RI56 91 aa19.16■□□□□ 0.66
SHROOM1-204ENST00000440118 H3BMM5 538 aa19.16■□□□□ 0.66
SHROOM1-204ENST00000440118 ZNF749O43361 778 aa19.16■□□□□ 0.66
SHROOM1-204ENST00000440118 GPC4O75487 556 aa19.16■□□□□ 0.66
SHROOM1-204ENST00000440118 SLCO2B1O94956 709 aa19.16■□□□□ 0.66
SHROOM1-204ENST00000440118 FMO4P31512 558 aa19.16■□□□□ 0.66
SHROOM1-204ENST00000440118 COILP38432 576 aaPredicted RBP19.16■□□□□ 0.66
SHROOM1-204ENST00000440118 PMS2P54278 862 aa19.16■□□□□ 0.66
SHROOM1-204ENST00000440118 PPP1R7Q15435 360 aa19.16■□□□□ 0.66
SHROOM1-204ENST00000440118 UGT8Q16880 541 aa19.16■□□□□ 0.66
SHROOM1-204ENST00000440118 SLC5A12Q1EHB4 618 aa19.16■□□□□ 0.66
SHROOM1-204ENST00000440118 PTCHD3Q3KNS1 767 aa19.16■□□□□ 0.66
SHROOM1-204ENST00000440118 PLEKHS1Q5SXH7 462 aa19.16■□□□□ 0.66
SHROOM1-204ENST00000440118 IZUMO3Q5VZ72 239 aa19.16■□□□□ 0.66
SHROOM1-204ENST00000440118 CNSTQ6PJW8 725 aa19.16■□□□□ 0.66
SHROOM1-204ENST00000440118 C2orf73Q8N5S3 287 aaPredicted RBP19.16■□□□□ 0.66
SHROOM1-204ENST00000440118 THAP4Q8WY91 577 aa19.16■□□□□ 0.66
SHROOM1-204ENST00000440118 SLC22A18Q96BI1 424 aa19.16■□□□□ 0.66
SHROOM1-204ENST00000440118 FAM136AQ96C01 138 aa19.16■□□□□ 0.66
SHROOM1-204ENST00000440118 TXLNGQ9NUQ3 528 aa19.16■□□□□ 0.66
SHROOM1-204ENST00000440118 PCMTD2Q9NV79 361 aa19.16■□□□□ 0.66
SHROOM1-204ENST00000440118 INTS7Q9NVH2 962 aaKnown RBP19.16■□□□□ 0.66
SHROOM1-204ENST00000440118 CDYLQ9Y232 598 aa19.16■□□□□ 0.66
SHROOM1-204ENST00000440118 AP1M2Q9Y6Q5 423 aa19.16■□□□□ 0.66
SHROOM1-204ENST00000440118 FLNBO75369 2602 aaKnown RBP19.16■□□□□ 0.66
SHROOM1-204ENST00000440118 CTAGE9A4FU28 777 aa19.15■□□□□ 0.66
SHROOM1-204ENST00000440118 SUV39H1O43463 412 aa19.15■□□□□ 0.66
SHROOM1-204ENST00000440118 PHF2O75151 1096 aa19.15■□□□□ 0.66
SHROOM1-204ENST00000440118 TMEM63AO94886 807 aa19.15■□□□□ 0.66
SHROOM1-204ENST00000440118 RECKO95980 971 aa19.15■□□□□ 0.66
SHROOM1-204ENST00000440118 CHRM3P20309 590 aa19.15■□□□□ 0.66
SHROOM1-204ENST00000440118 OGNP20774 298 aaKnown RBP19.15■□□□□ 0.66
SHROOM1-204ENST00000440118 CD9P21926 228 aa19.15■□□□□ 0.66
SHROOM1-204ENST00000440118 BDKRB1P46663 353 aa19.15■□□□□ 0.66
SHROOM1-204ENST00000440118 IL10RAQ13651 578 aa19.15■□□□□ 0.66
SHROOM1-204ENST00000440118 THOC5Q13769 683 aaKnown RBP19.15■□□□□ 0.66
SHROOM1-204ENST00000440118 DHX34Q14147 1143 aaKnown RBP19.15■□□□□ 0.66
SHROOM1-204ENST00000440118 KYNUQ16719 465 aa19.15■□□□□ 0.66
SHROOM1-204ENST00000440118 ANKRD22Q5VYY1 191 aa19.15■□□□□ 0.66
SHROOM1-204ENST00000440118 ARMC3Q5W041 872 aa19.15■□□□□ 0.66
SHROOM1-204ENST00000440118 RAD51AP1Q96B01 352 aa19.15■□□□□ 0.66
SHROOM1-204ENST00000440118 IL17FQ96PD4 163 aa19.15■□□□□ 0.66
SHROOM1-204ENST00000440118 OSBPL9Q96SU4 736 aa19.15■□□□□ 0.66
SHROOM1-204ENST00000440118 TCF12Q99081 682 aa19.15■□□□□ 0.66
SHROOM1-204ENST00000440118 C17orf62Q9BQA9 187 aa19.15■□□□□ 0.66
SHROOM1-204ENST00000440118 DPH2Q9BQC3 489 aaPredicted RBP19.15■□□□□ 0.66
SHROOM1-204ENST00000440118 CCDC68Q9H2F9 335 aa19.15■□□□□ 0.66
SHROOM1-204ENST00000440118 FAM60AQ9NP50 221 aa19.15■□□□□ 0.66
SHROOM1-204ENST00000440118 TRMT1Q9NXH9 659 aaKnown RBP19.15■□□□□ 0.66
SHROOM1-204ENST00000440118 GPN3Q9UHW5 284 aaPredicted RBP19.15■□□□□ 0.66
SHROOM1-204ENST00000440118 TP53TG5Q9Y2B4 290 aa19.15■□□□□ 0.66
SHROOM1-204ENST00000440118 CRYL1Q9Y2S2 319 aa19.15■□□□□ 0.66
SHROOM1-204ENST00000440118 MAD1L1Q9Y6D9 718 aa19.15■□□□□ 0.66
SHROOM1-204ENST00000440118 MYO18BQ8IUG5 2567 aa19.15■□□□□ 0.66
SHROOM1-204ENST00000440118 FER1L5A0AVI2 2057 aa19.14■□□□□ 0.65
SHROOM1-204ENST00000440118 SDR42E2A6NKP2 422 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms