RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 IER2Q9BTL4 223 aa4.66□□□□□ -1.66
EDEM3-203ENST00000439962 LGR4Q9BXB1 951 aa4.66□□□□□ -1.66
EDEM3-203ENST00000439962 MRPS26Q9BYN8 205 aaKnown RBP4.66□□□□□ -1.66
EDEM3-203ENST00000439962 ATP13A3Q9H7F0 1226 aa4.66□□□□□ -1.66
EDEM3-203ENST00000439962 SPAG4Q9NPE6 437 aa4.66□□□□□ -1.66
EDEM3-203ENST00000439962 ARMC1Q9NVT9 282 aa4.66□□□□□ -1.66
EDEM3-203ENST00000439962 NLE1Q9NVX2 485 aaPredicted RBP4.66□□□□□ -1.66
EDEM3-203ENST00000439962 KLHL42Q9P2K6 505 aa4.66□□□□□ -1.66
EDEM3-203ENST00000439962 SLC17A6Q9P2U8 582 aa4.66□□□□□ -1.66
EDEM3-203ENST00000439962 ABCD2Q9UBJ2 740 aa4.66□□□□□ -1.66
EDEM3-203ENST00000439962 B4GALT6Q9UBX8 382 aa4.66□□□□□ -1.66
EDEM3-203ENST00000439962 SEPT3Q9UH03 358 aa4.66□□□□□ -1.66
EDEM3-203ENST00000439962 KLF15Q9UIH9 416 aa4.66□□□□□ -1.66
EDEM3-203ENST00000439962 ZDHHC2Q9UIJ5 367 aa4.66□□□□□ -1.66
EDEM3-203ENST00000439962 RIMS3Q9UJD0 308 aa4.66□□□□□ -1.66
EDEM3-203ENST00000439962 TSR3Q9UJK0 312 aaKnown RBP4.66□□□□□ -1.66
EDEM3-203ENST00000439962 DTNAQ9Y4J8 743 aa4.66□□□□□ -1.66
EDEM3-203ENST00000439962 RAI2Q9Y5P3 530 aa4.66□□□□□ -1.66
EDEM3-203ENST00000439962 COPG1Q9Y678 874 aaKnown RBP4.66□□□□□ -1.66
EDEM3-203ENST00000439962 ITPR1Q14643 2758 aa4.66□□□□□ -1.66
EDEM3-203ENST00000439962 MYO18BQ8IUG5 2567 aa4.66□□□□□ -1.66
EDEM3-203ENST00000439962 C1orf232A0A0U1RR37 186 aa4.66□□□□□ -1.66
EDEM3-203ENST00000439962 TCRBV3S1A0A5B6 114 aa4.66□□□□□ -1.66
EDEM3-203ENST00000439962 NPIPB15A6NHN6 443 aaPredicted RBP4.66□□□□□ -1.66
EDEM3-203ENST00000439962 PDLIM1O00151 329 aa4.66□□□□□ -1.66
EDEM3-203ENST00000439962 TLR4O00206 839 aa4.66□□□□□ -1.66
EDEM3-203ENST00000439962 PSMD12O00232 456 aaPredicted RBP4.66□□□□□ -1.66
EDEM3-203ENST00000439962 UBDO15205 165 aa4.66□□□□□ -1.66
EDEM3-203ENST00000439962 SPINT1O43278 529 aa4.66□□□□□ -1.66
EDEM3-203ENST00000439962 LDB2O43679 373 aa4.66□□□□□ -1.66
EDEM3-203ENST00000439962 KERAO60938 352 aa4.66□□□□□ -1.66
EDEM3-203ENST00000439962 RECQL5O94762 991 aaPredicted RBP4.66□□□□□ -1.66
EDEM3-203ENST00000439962 RASGRP1O95267 797 aa4.66□□□□□ -1.66
EDEM3-203ENST00000439962 TNFAIP8O95379 198 aa4.66□□□□□ -1.66
EDEM3-203ENST00000439962 MLYCDO95822 493 aa4.66□□□□□ -1.66
EDEM3-203ENST00000439962 PYGLP06737 847 aa4.66□□□□□ -1.66
EDEM3-203ENST00000439962 SYPP08247 313 aa4.66□□□□□ -1.66
EDEM3-203ENST00000439962 SNRPB2P08579 225 aaKnown RBP4.66□□□□□ -1.66
EDEM3-203ENST00000439962 F7P08709 466 aaPredicted RBP4.66□□□□□ -1.66
EDEM3-203ENST00000439962 UMPSP11172 480 aa4.66□□□□□ -1.66
EDEM3-203ENST00000439962 C6P13671 934 aa4.66□□□□□ -1.66
EDEM3-203ENST00000439962 TIMP2P16035 220 aa4.66□□□□□ -1.66
EDEM3-203ENST00000439962 TPH1P17752 444 aa4.66□□□□□ -1.66
EDEM3-203ENST00000439962 VCLP18206 1134 aa4.66□□□□□ -1.66
EDEM3-203ENST00000439962 SLC7A1P30825 629 aa4.66□□□□□ -1.66
EDEM3-203ENST00000439962 PRAMEP78395 509 aa4.66□□□□□ -1.66
EDEM3-203ENST00000439962 DLG1Q12959 904 aa4.66□□□□□ -1.66
EDEM3-203ENST00000439962 BIRC2Q13490 618 aa4.66□□□□□ -1.66
EDEM3-203ENST00000439962 LRP8Q14114 963 aa4.66□□□□□ -1.66
EDEM3-203ENST00000439962 ARHGEF7Q14155 803 aa4.66□□□□□ -1.66
EDEM3-203ENST00000439962 IHHQ14623 411 aa4.66□□□□□ -1.66
EDEM3-203ENST00000439962 POU6F1Q14863 301 aa4.66□□□□□ -1.66
EDEM3-203ENST00000439962 TEAD4Q15561 434 aa4.66□□□□□ -1.66
EDEM3-203ENST00000439962 CNGA3Q16281 694 aa4.66□□□□□ -1.66
EDEM3-203ENST00000439962 CDKL4Q5MAI5 379 aa4.66□□□□□ -1.66
EDEM3-203ENST00000439962 PLA2G2CQ5R387 149 aa4.66□□□□□ -1.66
EDEM3-203ENST00000439962 KANK2Q63ZY3 851 aa4.66□□□□□ -1.66
EDEM3-203ENST00000439962 RAET1GQ6H3X3 334 aa4.66□□□□□ -1.66
EDEM3-203ENST00000439962 UGT3A1Q6NUS8 523 aa4.66□□□□□ -1.66
EDEM3-203ENST00000439962 SLC30A9Q6PML9 568 aa4.66□□□□□ -1.66
EDEM3-203ENST00000439962 CES3Q6UWW8 571 aa4.66□□□□□ -1.66
EDEM3-203ENST00000439962 MAMSTRQ6ZN01 415 aa4.66□□□□□ -1.66
EDEM3-203ENST00000439962 LARP4Q71RC2 724 aaKnown RBP eCLIP4.66□□□□□ -1.66
EDEM3-203ENST00000439962 CUZD1Q86UP6 607 aa4.66□□□□□ -1.66
EDEM3-203ENST00000439962 HORMAD1Q86X24 394 aa4.66□□□□□ -1.66
EDEM3-203ENST00000439962 KBTBD2Q8IY47 623 aa4.66□□□□□ -1.66
EDEM3-203ENST00000439962 SLC22A18ASQ8N1D0 253 aa4.66□□□□□ -1.66
EDEM3-203ENST00000439962 Q8N9G6 341 aaPredicted RBP4.66□□□□□ -1.66
EDEM3-203ENST00000439962 KIAA1191Q96A73 305 aa4.66□□□□□ -1.66
EDEM3-203ENST00000439962 PSKH2Q96QS6 385 aa4.66□□□□□ -1.66
EDEM3-203ENST00000439962 AARSD1Q9BTE6 412 aaKnown RBP4.66□□□□□ -1.66
EDEM3-203ENST00000439962 SCNM1Q9BWG6 230 aa4.66□□□□□ -1.66
EDEM3-203ENST00000439962 DPEP2Q9H4A9 486 aa4.66□□□□□ -1.66
EDEM3-203ENST00000439962 GSTO2Q9H4Y5 243 aa4.66□□□□□ -1.66
EDEM3-203ENST00000439962 CAB39LQ9H9S4 337 aa4.66□□□□□ -1.66
EDEM3-203ENST00000439962 RDH14Q9HBH5 336 aa4.66□□□□□ -1.66
EDEM3-203ENST00000439962 SGK2Q9HBY8 427 aa4.66□□□□□ -1.66
EDEM3-203ENST00000439962 CYP4F12Q9HCS2 524 aa4.66□□□□□ -1.66
EDEM3-203ENST00000439962 ZNF358Q9NW07 568 aa4.66□□□□□ -1.66
EDEM3-203ENST00000439962 GID8Q9NWU2 228 aa4.66□□□□□ -1.66
EDEM3-203ENST00000439962 TUBA8Q9NY65 449 aaPredicted RBP4.66□□□□□ -1.66
EDEM3-203ENST00000439962 TMEM181Q9P2C4 612 aa4.66□□□□□ -1.66
EDEM3-203ENST00000439962 CD300AQ9UGN4 299 aa4.66□□□□□ -1.66
EDEM3-203ENST00000439962 PTBP2Q9UKA9 531 aaKnown RBP4.66□□□□□ -1.66
EDEM3-203ENST00000439962 PNMA8BQ9ULN7 279 aaPredicted RBP4.66□□□□□ -1.66
EDEM3-203ENST00000439962 FADS3Q9Y5Q0 445 aa4.66□□□□□ -1.66
EDEM3-203ENST00000439962 KIAA1549LQ6ZVL6 1849 aa4.65□□□□□ -1.66
EDEM3-203ENST00000439962 TMEM131Q92545 1883 aa4.65□□□□□ -1.66
EDEM3-203ENST00000439962 E9PBE3 544 aa4.65□□□□□ -1.66
EDEM3-203ENST00000439962 AURKAO14965 403 aa4.65□□□□□ -1.66
EDEM3-203ENST00000439962 NPC1O15118 1278 aa4.65□□□□□ -1.66
EDEM3-203ENST00000439962 PLRG1O43660 514 aaKnown RBP4.65□□□□□ -1.66
EDEM3-203ENST00000439962 KLHL41O60662 606 aa4.65□□□□□ -1.66
EDEM3-203ENST00000439962 SNX2O60749 519 aa4.65□□□□□ -1.66
EDEM3-203ENST00000439962 SRP72O76094 671 aaKnown RBP4.65□□□□□ -1.66
EDEM3-203ENST00000439962 KCNK5O95279 499 aa4.65□□□□□ -1.66
EDEM3-203ENST00000439962 CHRNGP07510 517 aa4.65□□□□□ -1.66
EDEM3-203ENST00000439962 PRR35P0CG20 571 aa4.65□□□□□ -1.66
EDEM3-203ENST00000439962 IDO1P14902 403 aa4.65□□□□□ -1.66
EDEM3-203ENST00000439962 CD1DP15813 335 aa4.65□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms