RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 GABREP78334 506 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 GNA12Q03113 381 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 GALNT3Q14435 633 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 ZNF829Q3KNS6 432 aaPredicted RBP6.26□□□□□ -1.41
BDNF-211ENST00000439476 RAB6CQ53S08 254 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 NDUFAF5Q5TEU4 345 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 NIPAL1Q6NVV3 410 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 GCNT7Q6ZNI0 430 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 TRPV1Q8NER1 839 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 OR9I1Q8NGQ6 314 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 SLC47A1Q96FL8 570 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 BTN2A3PQ96KV6 586 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 OR52E6Q96RD3 313 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 SEMA3CQ99985 751 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 FNDC11Q9BVV2 318 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 NFKBIZQ9BYH8 718 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 RAB6CQ9H0N0 254 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 GOLGA2P5Q9HBQ8 144 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 ANKHQ9HCJ1 492 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.26□□□□□ -1.41
BDNF-211ENST00000439476 MRTO4Q9UKD2 239 aaKnown RBP6.26□□□□□ -1.41
BDNF-211ENST00000439476 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.26□□□□□ -1.41
BDNF-211ENST00000439476 ADAMTS7Q9UKP4 1686 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 PEX10O60683 326 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 NDUFS2O75306 463 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 FGF18O76093 207 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 EDN3P14138 238 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 RHOQP17081 205 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 PSMA1P25786 263 aaKnown RBP6.26□□□□□ -1.41
BDNF-211ENST00000439476 LMO2P25791 158 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 ADCYAP1R1P41586 468 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 RPL38P63173 70 aaKnown RBP6.26□□□□□ -1.41
BDNF-211ENST00000439476 FKBP1BP68106 108 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 RGS1Q08116 209 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 SLC39A12Q504Y0 691 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 FBXL19Q6PCT2 694 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 CHSY3Q70JA7 882 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 CYS1Q717R9 158 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 CLIP4Q8N3C7 705 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 C9orf43Q8TAL5 461 aaPredicted RBP6.26□□□□□ -1.41
BDNF-211ENST00000439476 SUSD6Q92537 303 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 ELMO1Q92556 727 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 GPR22Q99680 433 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 HAPLN2Q9GZV7 340 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 THUMPD1Q9NXG2 353 aaKnown RBP6.26□□□□□ -1.41
BDNF-211ENST00000439476 ACTR3BQ9P1U1 418 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 POLR1DQ9Y2S0 133 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 U3KQV3 271 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 ECM29Q5VYK3 1845 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 SMIM35A0A1B0GVV1 85 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 PER2O15055 1255 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 NUPL2O15504 423 aaKnown RBP6.26□□□□□ -1.41
BDNF-211ENST00000439476 AQP9O43315 295 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 BRINP1O60477 761 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 NDST3O95803 873 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 AHSGP02765 367 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 TP53P04637 393 aaPredicted RBP6.26□□□□□ -1.41
BDNF-211ENST00000439476 PKMP14618 531 aaKnown RBP6.26□□□□□ -1.41
BDNF-211ENST00000439476 M6PRP20645 277 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 KELP23276 732 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 TIE1P35590 1138 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 SLC1A2P43004 574 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 EMP3P54852 163 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 MRPS6P82932 125 aaKnown RBP6.26□□□□□ -1.41
BDNF-211ENST00000439476 LCP2Q13094 533 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 IRAK1BP1Q5VVH5 260 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 CNSTQ6PJW8 725 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 USP50Q70EL3 339 aaPredicted RBP6.26□□□□□ -1.41
BDNF-211ENST00000439476 ERMP1Q7Z2K6 904 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 ARFGAP1Q8N6T3 406 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 PPP1R13LQ8WUF5 828 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 TMEM174Q8WUU8 243 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 SLC35F5Q8WV83 523 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 ASZ1Q8WWH4 475 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 ISOC1Q96CN7 298 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 TMCO6Q96DC7 493 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 KIFC1Q9BW19 673 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 TP63Q9H3D4 680 aaPredicted RBP6.26□□□□□ -1.41
BDNF-211ENST00000439476 SNX10Q9Y5X0 201 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 MARF1Q9Y4F3 1742 aaKnown RBP6.25□□□□□ -1.41
BDNF-211ENST00000439476 TAF1P21675 1872 aa6.25□□□□□ -1.41
BDNF-211ENST00000439476 PRSS44E7EML9 344 aa6.25□□□□□ -1.41
BDNF-211ENST00000439476 H3BNH8 94 aa6.25□□□□□ -1.41
BDNF-211ENST00000439476 PDHXO00330 501 aa6.25□□□□□ -1.41
BDNF-211ENST00000439476 CCL22O00626 93 aa6.25□□□□□ -1.41
BDNF-211ENST00000439476 PIP5K1BO14986 540 aa6.25□□□□□ -1.41
BDNF-211ENST00000439476 PCDH8O95206 1070 aa6.25□□□□□ -1.41
BDNF-211ENST00000439476 CLIC3O95833 236 aa6.25□□□□□ -1.41
BDNF-211ENST00000439476 FUCA1P04066 466 aa6.25□□□□□ -1.41
BDNF-211ENST00000439476 SRPRAP08240 638 aaKnown RBP6.25□□□□□ -1.41
BDNF-211ENST00000439476 ATXN8OSP0DMR3 200 aa6.25□□□□□ -1.41
BDNF-211ENST00000439476 NR2F1P10589 423 aa6.25□□□□□ -1.41
BDNF-211ENST00000439476 UROSP10746 265 aa6.25□□□□□ -1.41
BDNF-211ENST00000439476 EPHX2P34913 555 aa6.25□□□□□ -1.41
BDNF-211ENST00000439476 KIR3DL1P43629 444 aa6.25□□□□□ -1.41
BDNF-211ENST00000439476 POLR2JP52435 117 aaKnown RBP6.25□□□□□ -1.41
BDNF-211ENST00000439476 ATP12AP54707 1039 aa6.25□□□□□ -1.41
BDNF-211ENST00000439476 MVKQ03426 396 aa6.25□□□□□ -1.41
BDNF-211ENST00000439476 SLC10A2Q12908 348 aaPredicted RBP6.25□□□□□ -1.41
BDNF-211ENST00000439476 FBXO43Q4G163 708 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms