RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 TCF3P15923 654 aa9.26□□□□□ -0.93
CUX1-206ENST00000437600 ITGALP20701 1170 aa9.26□□□□□ -0.93
CUX1-206ENST00000437600 AP1S1P61966 158 aa9.26□□□□□ -0.93
CUX1-206ENST00000437600 MAP7Q14244 749 aa9.26□□□□□ -0.93
CUX1-206ENST00000437600 GRIN2CQ14957 1233 aa9.26□□□□□ -0.93
CUX1-206ENST00000437600 CDKN3Q16667 212 aa9.26□□□□□ -0.93
CUX1-206ENST00000437600 ADNP2Q6IQ32 1131 aa9.26□□□□□ -0.93
CUX1-206ENST00000437600 ENPP6Q6UWR7 440 aa9.26□□□□□ -0.93
CUX1-206ENST00000437600 ZNF783Q6ZMS7 281 aa9.26□□□□□ -0.93
CUX1-206ENST00000437600 SNX20Q7Z614 316 aa9.26□□□□□ -0.93
CUX1-206ENST00000437600 C12orf40Q86WS4 652 aa9.26□□□□□ -0.93
CUX1-206ENST00000437600 CPXM2Q8N436 756 aa9.26□□□□□ -0.93
CUX1-206ENST00000437600 LIX1Q8N485 282 aa9.26□□□□□ -0.93
CUX1-206ENST00000437600 VOPP1Q96AW1 172 aa9.26□□□□□ -0.93
CUX1-206ENST00000437600 FAM126AQ9BYI3 521 aaPredicted RBP9.26□□□□□ -0.93
CUX1-206ENST00000437600 CARS2Q9HA77 564 aaKnown RBP9.26□□□□□ -0.93
CUX1-206ENST00000437600 ACTR3BQ9P1U1 418 aa9.26□□□□□ -0.93
CUX1-206ENST00000437600 OPTCQ9UBM4 332 aa9.26□□□□□ -0.93
CUX1-206ENST00000437600 COLQQ9Y215 455 aaPredicted RBP9.26□□□□□ -0.93
CUX1-206ENST00000437600 SLC22A14Q9Y267 594 aa9.26□□□□□ -0.93
CUX1-206ENST00000437600 TMEM98Q9Y2Y6 226 aa9.26□□□□□ -0.93
CUX1-206ENST00000437600 RAD51BO15315 384 aa9.25□□□□□ -0.93
CUX1-206ENST00000437600 S100BP04271 92 aaPredicted RBP9.25□□□□□ -0.93
CUX1-206ENST00000437600 HOXB8P17481 243 aaPredicted RBP9.25□□□□□ -0.93
CUX1-206ENST00000437600 ACRV1P26436 265 aa9.25□□□□□ -0.93
CUX1-206ENST00000437600 SERPINA4P29622 427 aa9.25□□□□□ -0.93
CUX1-206ENST00000437600 METAP1P53582 386 aa9.25□□□□□ -0.93
CUX1-206ENST00000437600 IMPG1Q17R60 797 aa9.25□□□□□ -0.93
CUX1-206ENST00000437600 ARHGAP15Q53QZ3 475 aa9.25□□□□□ -0.93
CUX1-206ENST00000437600 AARS2Q5JTZ9 985 aaKnown RBP9.25□□□□□ -0.93
CUX1-206ENST00000437600 GPRC6AQ5T6X5 926 aa9.25□□□□□ -0.93
CUX1-206ENST00000437600 TXNDC11Q6PKC3 985 aa9.25□□□□□ -0.93
CUX1-206ENST00000437600 Q6ZVL8 140 aa9.25□□□□□ -0.93
CUX1-206ENST00000437600 RBFAQ8N0V3 343 aa9.25□□□□□ -0.93
CUX1-206ENST00000437600 CLEC4FQ8N1N0 589 aa9.25□□□□□ -0.93
CUX1-206ENST00000437600 ZBTB2Q8N680 514 aa9.25□□□□□ -0.93
CUX1-206ENST00000437600 SGCDQ92629 289 aa9.25□□□□□ -0.93
CUX1-206ENST00000437600 ABTB1Q969K4 478 aaPredicted RBP9.25□□□□□ -0.93
CUX1-206ENST00000437600 RHBDF1Q96CC6 855 aa9.25□□□□□ -0.93
CUX1-206ENST00000437600 DGCR14Q96DF8 476 aaKnown RBP9.25□□□□□ -0.93
CUX1-206ENST00000437600 ZNF382Q96SR6 550 aa9.25□□□□□ -0.93
CUX1-206ENST00000437600 TTYH1Q9H313 450 aaPredicted RBP9.25□□□□□ -0.93
CUX1-206ENST00000437600 ACTR8Q9H981 624 aa9.25□□□□□ -0.93
CUX1-206ENST00000437600 EXD2Q9NVH0 621 aa9.25□□□□□ -0.93
CUX1-206ENST00000437600 RIC8BQ9NVN3 520 aa9.25□□□□□ -0.93
CUX1-206ENST00000437600 AASSQ9UDR5 926 aa9.25□□□□□ -0.93
CUX1-206ENST00000437600 PTBP2Q9UKA9 531 aaKnown RBP9.25□□□□□ -0.93
CUX1-206ENST00000437600 RIMKLBQ9ULI2 386 aa9.25□□□□□ -0.93
CUX1-206ENST00000437600 DLGAP4Q9Y2H0 992 aa9.25□□□□□ -0.93
CUX1-206ENST00000437600 SOX1O00570 391 aaPredicted RBP9.25□□□□□ -0.93
CUX1-206ENST00000437600 ACOX3O15254 700 aa9.25□□□□□ -0.93
CUX1-206ENST00000437600 HLA-EP13747 358 aa9.25□□□□□ -0.93
CUX1-206ENST00000437600 AKT1P31749 480 aa9.25□□□□□ -0.93
CUX1-206ENST00000437600 SNRPD1P62314 119 aaKnown RBP9.25□□□□□ -0.93
CUX1-206ENST00000437600 PHC1P78364 1004 aa9.25□□□□□ -0.93
CUX1-206ENST00000437600 HYAL1Q12794 435 aa9.25□□□□□ -0.93
CUX1-206ENST00000437600 ABRQ12979 859 aa9.25□□□□□ -0.93
CUX1-206ENST00000437600 RAB30Q15771 203 aa9.25□□□□□ -0.93
CUX1-206ENST00000437600 PGS1Q32NB8 556 aa9.25□□□□□ -0.93
CUX1-206ENST00000437600 ANKRD26P1Q6NSI1 321 aa9.25□□□□□ -0.93
CUX1-206ENST00000437600 ADIPOR2Q86V24 386 aa9.25□□□□□ -0.93
CUX1-206ENST00000437600 CATSPER1Q8NEC5 780 aa9.25□□□□□ -0.93
CUX1-206ENST00000437600 TRPV3Q8NET8 790 aa9.25□□□□□ -0.93
CUX1-206ENST00000437600 TFAP2CQ92754 450 aa9.25□□□□□ -0.93
CUX1-206ENST00000437600 EBPLQ9BY08 206 aa9.25□□□□□ -0.93
CUX1-206ENST00000437600 SLC2A11Q9BYW1 496 aa9.25□□□□□ -0.93
CUX1-206ENST00000437600 MRPL40Q9NQ50 206 aaKnown RBP9.25□□□□□ -0.93
CUX1-206ENST00000437600 AGPAT4Q9NRZ5 378 aa9.25□□□□□ -0.93
CUX1-206ENST00000437600 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.25□□□□□ -0.93
CUX1-206ENST00000437600 LEF1Q9UJU2 399 aaPredicted RBP9.25□□□□□ -0.93
CUX1-206ENST00000437600 TMPRSS11EQ9UL52 423 aa9.25□□□□□ -0.93
CUX1-206ENST00000437600 VPS9D1Q9Y2B5 631 aa9.25□□□□□ -0.93
CUX1-206ENST00000437600 WASH3PC4AMC7 463 aa9.24□□□□□ -0.93
CUX1-206ENST00000437600 H7C0S8 307 aa9.24□□□□□ -0.93
CUX1-206ENST00000437600 ASLP04424 464 aa9.24□□□□□ -0.93
CUX1-206ENST00000437600 MYCLP1P12525 358 aaPredicted RBP9.24□□□□□ -0.93
CUX1-206ENST00000437600 ATP4BP51164 291 aa9.24□□□□□ -0.93
CUX1-206ENST00000437600 SFSWAPQ12872 951 aaKnown RBP9.24□□□□□ -0.93
CUX1-206ENST00000437600 INPP5AQ14642 412 aa9.24□□□□□ -0.93
CUX1-206ENST00000437600 CCDC85BQ15834 202 aaPredicted RBP9.24□□□□□ -0.93
CUX1-206ENST00000437600 NKG7Q16617 165 aa9.24□□□□□ -0.93
CUX1-206ENST00000437600 DUSP6Q16828 381 aa9.24□□□□□ -0.93
CUX1-206ENST00000437600 OGFOD2Q6N063 350 aa9.24□□□□□ -0.93
CUX1-206ENST00000437600 PPP4R4Q6NUP7 873 aa9.24□□□□□ -0.93
CUX1-206ENST00000437600 TTC33Q6PID6 262 aaPredicted RBP9.24□□□□□ -0.93
CUX1-206ENST00000437600 SPATA19Q7Z5L4 167 aa9.24□□□□□ -0.93
CUX1-206ENST00000437600 ADAMTSL2Q86TH1 951 aa9.24□□□□□ -0.93
CUX1-206ENST00000437600 NXPE1Q8N323 547 aa9.24□□□□□ -0.93
CUX1-206ENST00000437600 PNPT1Q8TCS8 783 aaKnown RBP9.24□□□□□ -0.93
CUX1-206ENST00000437600 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.24□□□□□ -0.936e-7■■■■■ 53.4
CUX1-206ENST00000437600 MTERF1Q99551 399 aaKnown RBP9.24□□□□□ -0.93
CUX1-206ENST00000437600 CGREF1Q99674 301 aa9.24□□□□□ -0.93
CUX1-206ENST00000437600 DCUN1D5Q9BTE7 237 aa9.24□□□□□ -0.93
CUX1-206ENST00000437600 CD244Q9BZW8 370 aa9.24□□□□□ -0.93
CUX1-206ENST00000437600 SUV39H2Q9H5I1 410 aa9.24□□□□□ -0.93
CUX1-206ENST00000437600 BRD9Q9H8M2 597 aa9.24□□□□□ -0.93
CUX1-206ENST00000437600 SMURF2Q9HAU4 748 aa9.24□□□□□ -0.93
CUX1-206ENST00000437600 B4GALT6Q9UBX8 382 aa9.24□□□□□ -0.93
CUX1-206ENST00000437600 PDE10AQ9Y233 779 aa9.24□□□□□ -0.93
CUX1-206ENST00000437600 ITM2BQ9Y287 266 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms