RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 PCM1Q15154 2024 aa22.37■■□□□ 1.17
CPSF4-204ENST00000436336 OR5K4A6NMS3 321 aa22.37■■□□□ 1.17
CPSF4-204ENST00000436336 E2F3O00716 465 aa22.37■■□□□ 1.17
CPSF4-204ENST00000436336 LYPLA1O75608 230 aaPredicted RBP22.37■■□□□ 1.17
CPSF4-204ENST00000436336 HSPA4LO95757 839 aa22.37■■□□□ 1.17
CPSF4-204ENST00000436336 SLC16A8O95907 504 aa22.37■■□□□ 1.17
CPSF4-204ENST00000436336 SLC2A4P14672 509 aa22.37■■□□□ 1.17
CPSF4-204ENST00000436336 NDUFS1P28331 727 aa22.37■■□□□ 1.17
CPSF4-204ENST00000436336 IMPA1P29218 277 aa22.37■■□□□ 1.17
CPSF4-204ENST00000436336 ARRB2P32121 409 aa22.37■■□□□ 1.17
CPSF4-204ENST00000436336 GALNT1Q10472 559 aaPredicted RBP22.37■■□□□ 1.17
CPSF4-204ENST00000436336 KRT33BQ14525 404 aa22.37■■□□□ 1.17
CPSF4-204ENST00000436336 DUOXA1Q1HG43 343 aa22.37■■□□□ 1.17
CPSF4-204ENST00000436336 AGTRAPQ6RW13 159 aa22.37■■□□□ 1.17
CPSF4-204ENST00000436336 USP34Q70CQ2 3546 aa22.37■■□□□ 1.17
CPSF4-204ENST00000436336 CEP76Q8TAP6 659 aa22.37■■□□□ 1.17
CPSF4-204ENST00000436336 LMX1AQ8TE12 382 aa22.37■■□□□ 1.17
CPSF4-204ENST00000436336 ZNF483Q8TF39 744 aaPredicted RBP22.37■■□□□ 1.17
CPSF4-204ENST00000436336 ZNF395Q9H8N7 513 aaPredicted RBP22.37■■□□□ 1.17
CPSF4-204ENST00000436336 FGFR1OP2Q9NVK5 253 aa22.37■■□□□ 1.17
CPSF4-204ENST00000436336 TDRKHQ9Y2W6 561 aaKnown RBP22.37■■□□□ 1.17
CPSF4-204ENST00000436336 ASB1Q9Y576 335 aa22.37■■□□□ 1.17
CPSF4-204ENST00000436336 STK16O75716 305 aa22.36■■□□□ 1.17
CPSF4-204ENST00000436336 SLC6A12P48065 614 aa22.36■■□□□ 1.17
CPSF4-204ENST00000436336 BNC1Q01954 994 aa22.36■■□□□ 1.17
CPSF4-204ENST00000436336 CLCQ05315 142 aa22.36■■□□□ 1.17
CPSF4-204ENST00000436336 PRKG2Q13237 762 aa22.36■■□□□ 1.17
CPSF4-204ENST00000436336 ZXDCQ2QGD7 858 aaPredicted RBP22.36■■□□□ 1.17
CPSF4-204ENST00000436336 ARL13AQ5H913 290 aaPredicted RBP22.36■■□□□ 1.17
CPSF4-204ENST00000436336 IYDQ6PHW0 289 aa22.36■■□□□ 1.17
CPSF4-204ENST00000436336 SORT1Q99523 831 aa22.36■■□□□ 1.17
CPSF4-204ENST00000436336 HGH1Q9BTY7 390 aa22.36■■□□□ 1.17
CPSF4-204ENST00000436336 SPATA7Q9P0W8 599 aa22.36■■□□□ 1.17
CPSF4-204ENST00000436336 ZNF624Q9P2J8 865 aaPredicted RBP22.36■■□□□ 1.17
CPSF4-204ENST00000436336 OPTCQ9UBM4 332 aa22.36■■□□□ 1.17
CPSF4-204ENST00000436336 CIDEBQ9UHD4 219 aa22.36■■□□□ 1.17
CPSF4-204ENST00000436336 K7EPI3 171 aa22.35■■□□□ 1.17
CPSF4-204ENST00000436336 AQP9O43315 295 aa22.35■■□□□ 1.17
CPSF4-204ENST00000436336 CCNT2O60583 730 aaKnown RBP22.35■■□□□ 1.17
CPSF4-204ENST00000436336 PIAS2O75928 621 aa22.35■■□□□ 1.17
CPSF4-204ENST00000436336 PRAMEF14Q5SWL7 426 aa22.35■■□□□ 1.17
CPSF4-204ENST00000436336 ATG14Q6ZNE5 492 aa22.35■■□□□ 1.17
CPSF4-204ENST00000436336 RPS27LQ71UM5 84 aaKnown RBP22.35■■□□□ 1.17
CPSF4-204ENST00000436336 LRRC70Q7Z2Q7 622 aa22.35■■□□□ 1.17
CPSF4-204ENST00000436336 KLHDC8AQ8IYD2 350 aa22.35■■□□□ 1.17
CPSF4-204ENST00000436336 LSMEM2Q8N112 164 aa22.35■■□□□ 1.17
CPSF4-204ENST00000436336 ZNF548Q8NEK5 533 aaPredicted RBP22.35■■□□□ 1.17
CPSF4-204ENST00000436336 ZNF480Q8WV37 535 aa22.35■■□□□ 1.17
CPSF4-204ENST00000436336 CXorf40BQ96DE9 158 aa22.35■■□□□ 1.17
CPSF4-204ENST00000436336 CAMK1GQ96NX5 476 aa22.35■■□□□ 1.17
CPSF4-204ENST00000436336 ELF4Q99607 663 aaPredicted RBP22.35■■□□□ 1.17
CPSF4-204ENST00000436336 NSRP1Q9H0G5 558 aaKnown RBP22.35■■□□□ 1.17
CPSF4-204ENST00000436336 SLC32A1Q9H598 525 aa22.35■■□□□ 1.17
CPSF4-204ENST00000436336 EML4Q9HC35 981 aaKnown RBP22.35■■□□□ 1.17
CPSF4-204ENST00000436336 KIR2DS5A0A0G2JLQ3 304 aa22.34■■□□□ 1.17
CPSF4-204ENST00000436336 A0A0G2JNG1 304 aa22.34■■□□□ 1.17
CPSF4-204ENST00000436336 KIR2DS3K7RE56 304 aa22.34■■□□□ 1.17
CPSF4-204ENST00000436336 KDM1AO60341 852 aa22.34■■□□□ 1.17
CPSF4-204ENST00000436336 CHRNGP07510 517 aa22.34■■□□□ 1.17
CPSF4-204ENST00000436336 HSD17B2P37059 387 aa22.34■■□□□ 1.17
CPSF4-204ENST00000436336 CCR10P46092 362 aa22.34■■□□□ 1.17
CPSF4-204ENST00000436336 RXRGP48443 463 aa22.34■■□□□ 1.17
CPSF4-204ENST00000436336 CDH13P55290 713 aa22.34■■□□□ 1.17
CPSF4-204ENST00000436336 KIR2DS5Q14953 304 aa22.34■■□□□ 1.17
CPSF4-204ENST00000436336 ARHGAP19Q14CB8 494 aa22.34■■□□□ 1.17
CPSF4-204ENST00000436336 PTCHD3Q3KNS1 767 aa22.34■■□□□ 1.17
CPSF4-204ENST00000436336 CRLF3Q8IUI8 442 aa22.34■■□□□ 1.17
CPSF4-204ENST00000436336 RAB42Q8N4Z0 105 aa22.34■■□□□ 1.17
CPSF4-204ENST00000436336 FAM46DQ8NEK8 389 aa22.34■■□□□ 1.17
CPSF4-204ENST00000436336 LOXL4Q96JB6 756 aa22.34■■□□□ 1.17
CPSF4-204ENST00000436336 NSUN5Q96P11 429 aaKnown RBP22.34■■□□□ 1.17
CPSF4-204ENST00000436336 ATG10Q9H0Y0 220 aa22.34■■□□□ 1.17
CPSF4-204ENST00000436336 LNPEPQ9UIQ6 1025 aa22.34■■□□□ 1.17
CPSF4-204ENST00000436336 DOLKQ9UPQ8 538 aa22.34■■□□□ 1.17
CPSF4-204ENST00000436336 ERGP11308 486 aa22.34■■□□□ 1.17
CPSF4-204ENST00000436336 XRCC1P18887 633 aaPredicted RBP22.34■■□□□ 1.17
CPSF4-204ENST00000436336 SLC19A1P41440 591 aa22.34■■□□□ 1.17
CPSF4-204ENST00000436336 GDF5P43026 501 aa22.34■■□□□ 1.17
CPSF4-204ENST00000436336 PIK3CGP48736 1102 aa22.34■■□□□ 1.17
CPSF4-204ENST00000436336 ARRB1P49407 418 aaPredicted RBP22.34■■□□□ 1.17
CPSF4-204ENST00000436336 GTF2H2Q13888 395 aa22.34■■□□□ 1.17
CPSF4-204ENST00000436336 GTF2H2CQ6P1K8 395 aa22.34■■□□□ 1.17
CPSF4-204ENST00000436336 ZC3H14Q6PJT7 736 aaKnown RBP22.34■■□□□ 1.17
CPSF4-204ENST00000436336 NAGSQ8N159 534 aa22.34■■□□□ 1.17
CPSF4-204ENST00000436336 OR56A3Q8NH54 315 aa22.34■■□□□ 1.17
CPSF4-204ENST00000436336 ZDHHC1Q8WTX9 485 aa22.34■■□□□ 1.17
CPSF4-204ENST00000436336 MENTQ9BUN1 341 aa22.34■■□□□ 1.17
CPSF4-204ENST00000436336 KIR3DX1Q9H7L2 352 aa22.34■■□□□ 1.17
CPSF4-204ENST00000436336 ZBTB26Q9HCK0 441 aa22.34■■□□□ 1.17
CPSF4-204ENST00000436336 SEMA4BQ9NPR2 832 aaPredicted RBP22.34■■□□□ 1.17
CPSF4-204ENST00000436336 RAP2CQ9Y3L5 183 aa22.34■■□□□ 1.17
CPSF4-204ENST00000436336 PCDH15Q96QU1 1955 aa22.33■■□□□ 1.17
CPSF4-204ENST00000436336 ZNF839A8K0R7 811 aa22.33■■□□□ 1.17
CPSF4-204ENST00000436336 WDR47O94967 919 aa22.33■■□□□ 1.17
CPSF4-204ENST00000436336 MLYCDO95822 493 aa22.33■■□□□ 1.17
CPSF4-204ENST00000436336 DRD4P21917 467 aa22.33■■□□□ 1.17
CPSF4-204ENST00000436336 PNLIPRP1P54315 467 aa22.33■■□□□ 1.17
CPSF4-204ENST00000436336 LCP2Q13094 533 aa22.33■■□□□ 1.17
CPSF4-204ENST00000436336 PRKAA1Q13131 559 aa22.33■■□□□ 1.17
CPSF4-204ENST00000436336 GOLGA7Q7Z5G4 137 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms