RNA–Protein interactions for RNA: ENST00000434046.6

SYNPO2-203, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-203ENST00000434046 CRTAC1Q9NQ79 661 aa7.27□□□□□ -1.25
SYNPO2-203ENST00000434046 DYRK4Q9NR20 520 aa7.27□□□□□ -1.25
SYNPO2-203ENST00000434046 SDR39U1Q9NRG7 319 aaPredicted RBP7.27□□□□□ -1.25
SYNPO2-203ENST00000434046 AASDHPPTQ9NRN7 309 aa7.27□□□□□ -1.25
SYNPO2-203ENST00000434046 UTS2RQ9UKP6 389 aa7.27□□□□□ -1.25
SYNPO2-203ENST00000434046 EIF3LQ9Y262 564 aaKnown RBP7.27□□□□□ -1.25
SYNPO2-203ENST00000434046 ZNF487B1APH4 448 aa7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 AP3D1O14617 1153 aa7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 PTGESO14684 152 aa7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 TSPAN4O14817 238 aa7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 FGF10O15520 208 aaPredicted RBP7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 SSX4O60224 188 aa7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 SH3BP5O60239 455 aa7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 NDUFS3O75489 264 aa7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 BEST1O76090 585 aa7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 NDST3O95803 873 aa7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 DNAJB2P25686 324 aa7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 HNF4AP41235 474 aa7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 ACLYP53396 1101 aa7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 CDK10Q15131 360 aa7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 SOWAHCQ53LP3 525 aaPredicted RBP7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 BRMS1LQ5PSV4 323 aa7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 CCSAPQ6IQ19 270 aaPredicted RBP7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 NRARPQ7Z6K4 114 aa7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 MON1AQ86VX9 555 aa7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 ZDHHC21Q8IVQ6 265 aa7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 NATD1Q8N6N6 113 aa7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 ST13P5Q8NFI4 369 aaPredicted RBP7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 SKA2Q8WVK7 121 aaPredicted RBP7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 PHF21AQ96BD5 680 aa7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 ULK4Q96C45 1275 aa7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 TPD52L3Q96J77 140 aa7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 NPY6RQ99463 290 aa7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 SMOQ99835 787 aa7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 EGFL8Q99944 293 aa7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 ARHGAP39Q9C0H5 1083 aa7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 POLR3BQ9NW08 1133 aaPredicted RBP7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 PCDH10Q9P2E7 1040 aa7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 FBXW11Q9UKB1 542 aa7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 IKZF3Q9UKT9 509 aa7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 MCM3APO60318 1980 aa7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 AXIN1O15169 862 aa7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 DNAJB5O75953 348 aa7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 RPLP0P05388 317 aaKnown RBP7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 ARNTP27540 789 aa7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 DCTP40126 519 aa7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 CD86P42081 329 aa7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 POLD2P49005 469 aa7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 CCL23P55773 120 aa7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 ZNF45Q02386 682 aa7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 RAD51Q06609 339 aa7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 TWF1Q12792 350 aa7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 MRNIPQ6NTE8 343 aa7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 KLHL17Q6TDP4 642 aa7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 AGMOQ6ZNB7 445 aa7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 SLC38A6Q8IZM9 456 aa7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 ZNF784Q8NCA9 323 aaPredicted RBP7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 C2CD4AQ8NCU7 369 aaPredicted RBP7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 OR8H1Q8NGG4 311 aa7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 OR56A4Q8NGH8 313 aa7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 STAG3L4Q8TBR4 150 aa7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 KCTD13Q8WZ19 329 aa7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 SNAPC3Q92966 411 aa7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 SLC38A4Q969I6 547 aa7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 TBATAQ96M53 351 aa7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 GFM1Q96RP9 751 aaKnown RBP7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 MMP28Q9H239 520 aa7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 NTN4Q9HB63 628 aa7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 UCKL1Q9NWZ5 548 aa7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 TRPM5Q9NZQ8 1165 aa7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 GALPQ9UBC7 116 aa7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 PCDHGA10Q9Y5H3 936 aa7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 BRCA1P38398 1863 aaKnown RBP7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 TRIP11Q15643 1979 aa7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 A0A1W2PQH9 124 aa7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 TCRBV5S2A0A599 114 aa7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 FAM234BA2RU67 622 aa7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 SNTNA6NMZ2 147 aa7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 HAT1O14929 419 aa7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 CCNYL3P0C7X3 344 aa7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 POU1F1P28069 291 aa7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 CCND3P30281 292 aaPredicted RBP7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 UQCRC1P31930 480 aa7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 ARCN1P48444 511 aaKnown RBP7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 CDKN2DP55273 166 aa7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 MCCD1P59942 119 aaPredicted RBP7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 MXD1Q05195 221 aa7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 ZNF177Q13360 481 aaPredicted RBP7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 IL18R1Q13478 541 aa7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 TSNQ15631 228 aaKnown RBP7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 UBXN11Q5T124 520 aa7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 PNCKQ6P2M8 343 aa7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 GPRIN3Q6ZVF9 776 aa7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 B3GNT8Q7Z7M8 397 aa7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 ANKRD46Q86W74 232 aa7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 AMIGO1Q86WK6 493 aa7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 LINC01465Q8N7H1 131 aa7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 SPERTQ8NA61 448 aa7.26□□□□□ -1.25
SYNPO2-203ENST00000434046 UBE2FQ969M7 185 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms