RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 KCTD15Q96SI1 283 aaPredicted RBP8.78□□□□□ -1
CTNND1-208ENST00000428599 TMEM121BQ9BXQ6 578 aaPredicted RBP8.78□□□□□ -1
CTNND1-208ENST00000428599 COL1A1P02452 1464 aaPredicted RBP8.78□□□□□ -1
CTNND1-208ENST00000428599 RCCD1A6NED2 376 aa8.78□□□□□ -1
CTNND1-208ENST00000428599 BTNL10A8MVZ5 291 aa8.78□□□□□ -1
CTNND1-208ENST00000428599 LYPLA1O75608 230 aaPredicted RBP8.78□□□□□ -1
CTNND1-208ENST00000428599 CCND3P30281 292 aaPredicted RBP8.78□□□□□ -1
CTNND1-208ENST00000428599 C2orf27AQ580R0 203 aa8.78□□□□□ -1
CTNND1-208ENST00000428599 ARHGAP40Q5TG30 622 aa8.78□□□□□ -1
CTNND1-208ENST00000428599 ARHGAP22Q7Z5H3 698 aa8.78□□□□□ -1
CTNND1-208ENST00000428599 KCT2Q8NC54 265 aa8.78□□□□□ -1
CTNND1-208ENST00000428599 CAMKVQ8NCB2 501 aa8.78□□□□□ -1
CTNND1-208ENST00000428599 OR52J3Q8NH60 311 aa8.78□□□□□ -1
CTNND1-208ENST00000428599 SLC25A51Q9H1U9 297 aa8.78□□□□□ -1
CTNND1-208ENST00000428599 MED28Q9H204 178 aa8.78□□□□□ -1
CTNND1-208ENST00000428599 DPEP3Q9H4B8 488 aa8.78□□□□□ -1
CTNND1-208ENST00000428599 TAS2R7Q9NYW3 318 aa8.78□□□□□ -1
CTNND1-208ENST00000428599 A8MUA0 341 aa8.78□□□□□ -1
CTNND1-208ENST00000428599 CPNE3O75131 537 aaKnown RBP8.78□□□□□ -1
CTNND1-208ENST00000428599 COQ9O75208 318 aa8.78□□□□□ -1
CTNND1-208ENST00000428599 SCELO95171 688 aa8.78□□□□□ -1
CTNND1-208ENST00000428599 GRK5P34947 590 aa8.78□□□□□ -1
CTNND1-208ENST00000428599 RPL5P46777 297 aaKnown RBP8.78□□□□□ -1
CTNND1-208ENST00000428599 DUSP3P51452 185 aaPredicted RBP8.78□□□□□ -1
CTNND1-208ENST00000428599 LILRA4P59901 499 aa8.78□□□□□ -1
CTNND1-208ENST00000428599 JAG1P78504 1218 aa8.78□□□□□ -1
CTNND1-208ENST00000428599 OCLNQ16625 522 aa8.78□□□□□ -1
CTNND1-208ENST00000428599 MLIPQ5VWP3 458 aa8.78□□□□□ -1
CTNND1-208ENST00000428599 TPGS2Q68CL5 300 aa8.78□□□□□ -1
CTNND1-208ENST00000428599 C12orf40Q86WS4 652 aa8.78□□□□□ -1
CTNND1-208ENST00000428599 XYLT1Q86Y38 959 aa8.78□□□□□ -1
CTNND1-208ENST00000428599 GIPC3Q8TF64 312 aa8.78□□□□□ -1
CTNND1-208ENST00000428599 NINJ1Q92982 152 aa8.78□□□□□ -1
CTNND1-208ENST00000428599 PCDHB18PQ96TA0 734 aa8.78□□□□□ -1
CTNND1-208ENST00000428599 MIPEPQ99797 713 aa8.78□□□□□ -1
CTNND1-208ENST00000428599 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.78□□□□□ -15e-10■□□□□ 9.3
CTNND1-208ENST00000428599 OR51V1Q9H2C8 321 aa8.78□□□□□ -1
CTNND1-208ENST00000428599 C12orf4Q9NQ89 552 aa8.78□□□□□ -1
CTNND1-208ENST00000428599 SLC2A4RGQ9NR83 387 aa8.78□□□□□ -1
CTNND1-208ENST00000428599 ABCB8Q9NUT2 735 aa8.78□□□□□ -1
CTNND1-208ENST00000428599 C14orf105Q9NVL8 296 aa8.78□□□□□ -1
CTNND1-208ENST00000428599 ZNF282Q9UDV7 671 aaPredicted RBP8.78□□□□□ -1
CTNND1-208ENST00000428599 PHRF1Q9P1Y6 1649 aaKnown RBP8.78□□□□□ -1
CTNND1-208ENST00000428599 TRIM64BA6NI03 449 aa8.78□□□□□ -1
CTNND1-208ENST00000428599 SCDO00767 359 aa8.78□□□□□ -1
CTNND1-208ENST00000428599 TBX1O43435 398 aa8.78□□□□□ -1
CTNND1-208ENST00000428599 CLCQ05315 142 aa8.78□□□□□ -1
CTNND1-208ENST00000428599 ARFRP1Q13795 201 aa8.78□□□□□ -1
CTNND1-208ENST00000428599 TAF1AQ15573 450 aaPredicted RBP8.78□□□□□ -1
CTNND1-208ENST00000428599 VARS2Q5ST30 1063 aaKnown RBP8.78□□□□□ -1
CTNND1-208ENST00000428599 MBOAT1Q6ZNC8 495 aa8.78□□□□□ -1
CTNND1-208ENST00000428599 GK5Q6ZS86 529 aa8.78□□□□□ -1
CTNND1-208ENST00000428599 RAB11FIP2Q7L804 512 aa8.78□□□□□ -1
CTNND1-208ENST00000428599 ZNF627Q7L945 461 aa8.78□□□□□ -1
CTNND1-208ENST00000428599 TDRPQ86YL5 185 aa8.78□□□□□ -1
CTNND1-208ENST00000428599 ARL10Q8N8L6 244 aa8.78□□□□□ -1
CTNND1-208ENST00000428599 DQX1Q8TE96 717 aaKnown RBP8.78□□□□□ -1
CTNND1-208ENST00000428599 PPM1MQ96MI6 270 aa8.78□□□□□ -1
CTNND1-208ENST00000428599 EBPLQ9BY08 206 aa8.78□□□□□ -1
CTNND1-208ENST00000428599 TPK1Q9H3S4 243 aa8.78□□□□□ -1
CTNND1-208ENST00000428599 METTL7AQ9H8H3 244 aa8.78□□□□□ -1
CTNND1-208ENST00000428599 RGPD2P0DJD1 1756 aa8.78□□□□□ -1
CTNND1-208ENST00000428599 TCRBV9S1A1TA0A576 114 aa8.77□□□□□ -1
CTNND1-208ENST00000428599 KCNU1A8MYU2 1149 aa8.77□□□□□ -1
CTNND1-208ENST00000428599 ARVCFO00192 962 aa8.77□□□□□ -1
CTNND1-208ENST00000428599 ENPP3O14638 875 aa8.77□□□□□ -1
CTNND1-208ENST00000428599 TFECO14948 347 aaPredicted RBP8.77□□□□□ -1
CTNND1-208ENST00000428599 ZNF806P0C7X5 589 aa8.77□□□□□ -1
CTNND1-208ENST00000428599 GNAZP19086 355 aa8.77□□□□□ -1
CTNND1-208ENST00000428599 PTGER3P43115 390 aa8.77□□□□□ -1
CTNND1-208ENST00000428599 AKR1D1P51857 326 aa8.77□□□□□ -1
CTNND1-208ENST00000428599 POU5F1Q01860 360 aaKnown RBP8.77□□□□□ -1
CTNND1-208ENST00000428599 TLE2Q04725 743 aa8.77□□□□□ -1
CTNND1-208ENST00000428599 IL10RBQ08334 325 aa8.77□□□□□ -1
CTNND1-208ENST00000428599 ENPP2Q13822 863 aa8.77□□□□□ -1
CTNND1-208ENST00000428599 CMC1Q7Z7K0 106 aa8.77□□□□□ -1
CTNND1-208ENST00000428599 SLC9B2Q86UD5 537 aa8.77□□□□□ -1
CTNND1-208ENST00000428599 AKAP14Q86UN6 197 aa8.77□□□□□ -1
CTNND1-208ENST00000428599 HMCESQ96FZ2 354 aa8.77□□□□□ -1
CTNND1-208ENST00000428599 CCDC28BQ9BUN5 200 aa8.77□□□□□ -1
CTNND1-208ENST00000428599 B3GNT4Q9C0J1 378 aa8.77□□□□□ -1
CTNND1-208ENST00000428599 C11orf16Q9NQ32 467 aa8.77□□□□□ -1
CTNND1-208ENST00000428599 PCDHB16Q9NRJ7 776 aa8.77□□□□□ -1
CTNND1-208ENST00000428599 PNPOQ9NVS9 261 aa8.77□□□□□ -1
CTNND1-208ENST00000428599 GMEB1Q9Y692 573 aa8.77□□□□□ -1
CTNND1-208ENST00000428599 SYNGR4O95473 234 aa8.77□□□□□ -1.01
CTNND1-208ENST00000428599 CCL5P13501 91 aa8.77□□□□□ -1.01
CTNND1-208ENST00000428599 RPL17P18621 184 aaKnown RBP8.77□□□□□ -1.01
CTNND1-208ENST00000428599 PVALBP20472 110 aaPredicted RBP8.77□□□□□ -1.01
CTNND1-208ENST00000428599 CDH12P55289 794 aa8.77□□□□□ -1.01
CTNND1-208ENST00000428599 LCP2Q13094 533 aa8.77□□□□□ -1.01
CTNND1-208ENST00000428599 IFI44LQ53G44 452 aa8.77□□□□□ -1.01
CTNND1-208ENST00000428599 KLHL22Q53GT1 634 aa8.77□□□□□ -1.01
CTNND1-208ENST00000428599 C1orf189Q5VU69 101 aa8.77□□□□□ -1.01
CTNND1-208ENST00000428599 SLC25A25Q6KCM7 469 aa8.77□□□□□ -1.01
CTNND1-208ENST00000428599 OR6K6Q8NGW6 343 aa8.77□□□□□ -1.01
CTNND1-208ENST00000428599 UFD1Q92890 307 aa8.77□□□□□ -1.01
CTNND1-208ENST00000428599 PCED1BQ96HM7 432 aa8.77□□□□□ -1.01
CTNND1-208ENST00000428599 RNPEPL1Q9HAU8 725 aa8.77□□□□□ -1.01
CTNND1-208ENST00000428599 RUVBL1Q9Y265 456 aaKnown RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms