RNA–Protein interactions for RNA: ENST00000427755.2

DEPDC7-203, Transcript of DEP domain containing 7, humanhuman

TSL 2

Gene DEPDC7, Length 1,212 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-203ENST00000427755 RAPSNQ13702 412 aa12.58□□□□□ -0.4
DEPDC7-203ENST00000427755 OASLQ15646 514 aaKnown RBP12.58□□□□□ -0.4
DEPDC7-203ENST00000427755 TSTD2Q5T7W7 516 aa12.58□□□□□ -0.4
DEPDC7-203ENST00000427755 VWA5B1Q5TIE3 1220 aa12.58□□□□□ -0.4
DEPDC7-203ENST00000427755 MLIPQ5VWP3 458 aa12.58□□□□□ -0.4
DEPDC7-203ENST00000427755 MRPL14Q6P1L8 145 aaKnown RBP12.58□□□□□ -0.4
DEPDC7-203ENST00000427755 KIAA1328Q86T90 577 aa12.58□□□□□ -0.4
DEPDC7-203ENST00000427755 HOOK3Q86VS8 718 aa12.58□□□□□ -0.4
DEPDC7-203ENST00000427755 VRK3Q8IV63 474 aa12.58□□□□□ -0.4
DEPDC7-203ENST00000427755 FAM20CQ8IXL6 584 aa12.58□□□□□ -0.4
DEPDC7-203ENST00000427755 SYCE1Q8N0S2 351 aa12.58□□□□□ -0.4
DEPDC7-203ENST00000427755 ZNF655Q8N720 491 aaPredicted RBP12.58□□□□□ -0.4
DEPDC7-203ENST00000427755 LINC01555Q8NAE3 123 aa12.58□□□□□ -0.4
DEPDC7-203ENST00000427755 LKAAEAR1Q8TD35 194 aa12.58□□□□□ -0.4
DEPDC7-203ENST00000427755 N4BP2L2Q92802 583 aaPredicted RBP12.58□□□□□ -0.4
DEPDC7-203ENST00000427755 PNPLA2Q96AD5 504 aa12.58□□□□□ -0.4
DEPDC7-203ENST00000427755 C17orf62Q9BQA9 187 aa12.58□□□□□ -0.4
DEPDC7-203ENST00000427755 RBSNQ9H1K0 784 aa12.58□□□□□ -0.4
DEPDC7-203ENST00000427755 ETNK1Q9HBU6 452 aa12.58□□□□□ -0.4
DEPDC7-203ENST00000427755 LRRC4CQ9HCJ2 640 aa12.58□□□□□ -0.4
DEPDC7-203ENST00000427755 SLC22A11Q9NSA0 550 aa12.58□□□□□ -0.4
DEPDC7-203ENST00000427755 IMPACTQ9P2X3 320 aa12.58□□□□□ -0.4
DEPDC7-203ENST00000427755 RIMKLBQ9ULI2 386 aa12.58□□□□□ -0.4
DEPDC7-203ENST00000427755 G3BP2Q9UN86 482 aaKnown RBP12.58□□□□□ -0.4
DEPDC7-203ENST00000427755 HEATR9A2RTY3 570 aa12.57□□□□□ -0.4
DEPDC7-203ENST00000427755 LIASO43766 372 aa12.57□□□□□ -0.4
DEPDC7-203ENST00000427755 GPC4O75487 556 aa12.57□□□□□ -0.4
DEPDC7-203ENST00000427755 AGFG2O95081 481 aa12.57□□□□□ -0.4
DEPDC7-203ENST00000427755 PTMAP06454 111 aaKnown RBP12.57□□□□□ -0.4
DEPDC7-203ENST00000427755 UMODP07911 640 aa12.57□□□□□ -0.4
DEPDC7-203ENST00000427755 ITGAXP20702 1163 aa12.57□□□□□ -0.4
DEPDC7-203ENST00000427755 STIP1P31948 543 aaKnown RBP12.57□□□□□ -0.4
DEPDC7-203ENST00000427755 GRB7Q14451 532 aa12.57□□□□□ -0.4
DEPDC7-203ENST00000427755 SEMA3AQ14563 771 aa12.57□□□□□ -0.4
DEPDC7-203ENST00000427755 KIR2DS3Q14952 304 aa12.57□□□□□ -0.4
DEPDC7-203ENST00000427755 KYNUQ16719 465 aa12.57□□□□□ -0.4
DEPDC7-203ENST00000427755 NKAIN1Q4KMZ8 207 aa12.57□□□□□ -0.4
DEPDC7-203ENST00000427755 SYTL3Q4VX76 610 aa12.57□□□□□ -0.4
DEPDC7-203ENST00000427755 DNAJC21Q5F1R6 531 aaKnown RBP12.57□□□□□ -0.4
DEPDC7-203ENST00000427755 DCAF10Q5QP82 559 aa12.57□□□□□ -0.4
DEPDC7-203ENST00000427755 LYPLAL1Q5VWZ2 237 aa12.57□□□□□ -0.4
DEPDC7-203ENST00000427755 HIST2H2BCQ6DN03 193 aa12.57□□□□□ -0.4
DEPDC7-203ENST00000427755 TLDC1Q6P9B6 456 aa12.57□□□□□ -0.4
DEPDC7-203ENST00000427755 AFTPHQ6ULP2 937 aa12.57□□□□□ -0.4
DEPDC7-203ENST00000427755 SLC22A15Q8IZD6 547 aa12.57□□□□□ -0.4
DEPDC7-203ENST00000427755 DNAAF3Q8N9W5 541 aa12.57□□□□□ -0.4
DEPDC7-203ENST00000427755 LMNTD1Q8N9Z9 388 aa12.57□□□□□ -0.4
DEPDC7-203ENST00000427755 OR2Y1Q8NGV0 311 aa12.57□□□□□ -0.4
DEPDC7-203ENST00000427755 SGSM3Q96HU1 749 aa12.57□□□□□ -0.4
DEPDC7-203ENST00000427755 IP6K3Q96PC2 410 aa12.57□□□□□ -0.4
DEPDC7-203ENST00000427755 RANBP9Q96S59 729 aa12.57□□□□□ -0.4
DEPDC7-203ENST00000427755 BAG1Q99933 345 aaPredicted RBP12.57□□□□□ -0.4
DEPDC7-203ENST00000427755 DESI2Q9BSY9 194 aa12.57□□□□□ -0.4
DEPDC7-203ENST00000427755 AP1M1Q9BXS5 423 aa12.57□□□□□ -0.4
DEPDC7-203ENST00000427755 SLAMF7Q9NQ25 335 aa12.57□□□□□ -0.4
DEPDC7-203ENST00000427755 C5AR2Q9P296 337 aa12.57□□□□□ -0.4
DEPDC7-203ENST00000427755 IFT80Q9P2H3 777 aaPredicted RBP12.57□□□□□ -0.4
DEPDC7-203ENST00000427755 SRPK3Q9UPE1 567 aa12.57□□□□□ -0.4
DEPDC7-203ENST00000427755 PLCL2Q9UPR0 1127 aa12.57□□□□□ -0.4
DEPDC7-203ENST00000427755 KLHL20Q9Y2M5 609 aa12.57□□□□□ -0.4
DEPDC7-203ENST00000427755 PTRH2Q9Y3E5 179 aaKnown RBP12.57□□□□□ -0.4
DEPDC7-203ENST00000427755 CAPN6Q9Y6Q1 641 aa12.57□□□□□ -0.4
DEPDC7-203ENST00000427755 MED13Q9UHV7 2174 aa12.57□□□□□ -0.4
DEPDC7-203ENST00000427755 SPTBP11277 2137 aa12.56□□□□□ -0.4
DEPDC7-203ENST00000427755 NBPF19A0A087WUL8 3843 aa12.56□□□□□ -0.4
DEPDC7-203ENST00000427755 IQCF5A8MTL0 148 aa12.56□□□□□ -0.4
DEPDC7-203ENST00000427755 ISM1B1AKI9 464 aa12.56□□□□□ -0.4
DEPDC7-203ENST00000427755 MASP2O00187 686 aa12.56□□□□□ -0.4
DEPDC7-203ENST00000427755 MAGP20916 626 aa12.56□□□□□ -0.4
DEPDC7-203ENST00000427755 ADRA1DP25100 572 aa12.56□□□□□ -0.4
DEPDC7-203ENST00000427755 FDFT1P37268 417 aa12.56□□□□□ -0.4
DEPDC7-203ENST00000427755 FOLR3P41439 243 aa12.56□□□□□ -0.4
DEPDC7-203ENST00000427755 RAB28P51157 221 aa12.56□□□□□ -0.4
DEPDC7-203ENST00000427755 CSE1LP55060 971 aaKnown RBP12.56□□□□□ -0.4
DEPDC7-203ENST00000427755 KIF5AQ12840 1032 aa12.56□□□□□ -0.4
DEPDC7-203ENST00000427755 MRPL49Q13405 166 aaKnown RBP12.56□□□□□ -0.4
DEPDC7-203ENST00000427755 SLC9A5Q14940 896 aa12.56□□□□□ -0.4
DEPDC7-203ENST00000427755 PLEKHN1Q494U1 663 aaPredicted RBP12.56□□□□□ -0.4
DEPDC7-203ENST00000427755 PPP1R32Q7Z5V6 425 aa12.56□□□□□ -0.4
DEPDC7-203ENST00000427755 PRUNE1Q86TP1 453 aa12.56□□□□□ -0.4
DEPDC7-203ENST00000427755 OR4L1Q8NH43 312 aa12.56□□□□□ -0.4
DEPDC7-203ENST00000427755 SSC4DQ8WTU2 575 aa12.56□□□□□ -0.4
DEPDC7-203ENST00000427755 C19orf60Q96EN9 201 aa12.56□□□□□ -0.4
DEPDC7-203ENST00000427755 FER1L6-AS2Q96M78 137 aa12.56□□□□□ -0.4
DEPDC7-203ENST00000427755 ZNF552Q9H707 407 aaPredicted RBP12.56□□□□□ -0.4
DEPDC7-203ENST00000427755 CASS4Q9NQ75 786 aa12.56□□□□□ -0.4
DEPDC7-203ENST00000427755 P4HTMQ9NXG6 502 aa12.56□□□□□ -0.4
DEPDC7-203ENST00000427755 EURLQ9NYK6 297 aa12.56□□□□□ -0.4
DEPDC7-203ENST00000427755 PLEKHB1Q9UF11 243 aaPredicted RBP12.56□□□□□ -0.4
DEPDC7-203ENST00000427755 TCAF1Q9Y4C2 921 aa12.56□□□□□ -0.4
DEPDC7-203ENST00000427755 TNRC6AQ8NDV7 1962 aaKnown RBP12.56□□□□□ -0.4
DEPDC7-203ENST00000427755 KRT86O43790 486 aa12.55□□□□□ -0.4
DEPDC7-203ENST00000427755 ONECUT2O95948 504 aa12.55□□□□□ -0.4
DEPDC7-203ENST00000427755 IFNB1P01574 187 aa12.55□□□□□ -0.4
DEPDC7-203ENST00000427755 CD63P08962 238 aa12.55□□□□□ -0.4
DEPDC7-203ENST00000427755 ETS1P14921 441 aa12.55□□□□□ -0.4
DEPDC7-203ENST00000427755 CD9P21926 228 aa12.55□□□□□ -0.4
DEPDC7-203ENST00000427755 SOX8P57073 446 aa12.55□□□□□ -0.4
DEPDC7-203ENST00000427755 HSPA14Q0VDF9 509 aa12.55□□□□□ -0.4
DEPDC7-203ENST00000427755 MYBPC3Q14896 1274 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms