RNA–Protein interactions for RNA: ENST00000425562.6

LRCH3-203, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LRCH3, Length 2,970 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-203ENST00000425562 SLC14A2Q15849 920 aa13.2□□□□□ -0.3
LRCH3-203ENST00000425562 FAM110CQ1W6H9 321 aa13.2□□□□□ -0.3
LRCH3-203ENST00000425562 TPRG1LQ5T0D9 272 aa13.2□□□□□ -0.3
LRCH3-203ENST00000425562 GPSM1Q86YR5 675 aa13.2□□□□□ -0.3
LRCH3-203ENST00000425562 PIK3C3Q8NEB9 887 aa13.2□□□□□ -0.3
LRCH3-203ENST00000425562 OR4F6Q8NGB9 312 aa13.2□□□□□ -0.3
LRCH3-203ENST00000425562 UPF1Q92900 1129 aaKnown RBP eCLIP13.2□□□□□ -0.33e-7■■■■□ 24.6
LRCH3-203ENST00000425562 YIPF6Q96EC8 236 aa13.2□□□□□ -0.3
LRCH3-203ENST00000425562 BTN2A3PQ96KV6 586 aa13.2□□□□□ -0.3
LRCH3-203ENST00000425562 PARK7Q99497 189 aaKnown RBP13.2□□□□□ -0.3
LRCH3-203ENST00000425562 CLSTN3Q9BQT9 956 aa13.2□□□□□ -0.3
LRCH3-203ENST00000425562 AARSD1Q9BTE6 412 aaKnown RBP13.2□□□□□ -0.3
LRCH3-203ENST00000425562 KAT8Q9H7Z6 458 aaKnown RBP13.2□□□□□ -0.3
LRCH3-203ENST00000425562 C8orf4Q9NR00 106 aa13.2□□□□□ -0.3
LRCH3-203ENST00000425562 TAS2R13Q9NYV9 303 aa13.2□□□□□ -0.3
LRCH3-203ENST00000425562 N6AMT1Q9Y5N5 214 aa13.2□□□□□ -0.3
LRCH3-203ENST00000425562 DNMT3AQ9Y6K1 912 aaPredicted RBP13.2□□□□□ -0.3
LRCH3-203ENST00000425562 XIRP2A4UGR9 3374 aa13.2□□□□□ -0.3
LRCH3-203ENST00000425562 GPR182O15218 404 aa13.2□□□□□ -0.3
LRCH3-203ENST00000425562 B4GALT3O60512 393 aa13.2□□□□□ -0.3
LRCH3-203ENST00000425562 CREG1O75629 220 aa13.2□□□□□ -0.3
LRCH3-203ENST00000425562 FKBP9O95302 570 aa13.2□□□□□ -0.3
LRCH3-203ENST00000425562 WISP3O95389 354 aaPredicted RBP13.2□□□□□ -0.3
LRCH3-203ENST00000425562 HSPA7P48741 367 aa13.2□□□□□ -0.3
LRCH3-203ENST00000425562 DAPP51397 102 aa13.2□□□□□ -0.3
LRCH3-203ENST00000425562 MAP2K5Q13163 448 aa13.2□□□□□ -0.3
LRCH3-203ENST00000425562 ZNF404Q494X3 552 aa13.2□□□□□ -0.3
LRCH3-203ENST00000425562 FKBP9P1Q75LS8 142 aa13.2□□□□□ -0.3
LRCH3-203ENST00000425562 ZDHHC21Q8IVQ6 265 aa13.2□□□□□ -0.3
LRCH3-203ENST00000425562 ADHFE1Q8IWW8 467 aa13.2□□□□□ -0.3
LRCH3-203ENST00000425562 MSRB3Q8IXL7 192 aa13.2□□□□□ -0.3
LRCH3-203ENST00000425562 FAM217AQ8IXS0 508 aa13.2□□□□□ -0.3
LRCH3-203ENST00000425562 PARP16Q8N5Y8 322 aa13.2□□□□□ -0.3
LRCH3-203ENST00000425562 OR56A4Q8NGH8 313 aa13.2□□□□□ -0.3
LRCH3-203ENST00000425562 LILRB4Q8NHJ6 448 aa13.2□□□□□ -0.3
LRCH3-203ENST00000425562 KIAA1191Q96A73 305 aa13.2□□□□□ -0.3
LRCH3-203ENST00000425562 INPP5KQ9BT40 448 aa13.2□□□□□ -0.3
LRCH3-203ENST00000425562 CSNK1G1Q9HCP0 422 aa13.2□□□□□ -0.3
LRCH3-203ENST00000425562 FBXO8Q9NRD0 319 aa13.2□□□□□ -0.3
LRCH3-203ENST00000425562 PRG3Q9Y2Y8 225 aaPredicted RBP13.2□□□□□ -0.3
LRCH3-203ENST00000425562 NEUROG3Q9Y4Z2 214 aa13.2□□□□□ -0.3
LRCH3-203ENST00000425562 SPO11Q9Y5K1 396 aa13.2□□□□□ -0.3
LRCH3-203ENST00000425562 SCAMP3O14828 347 aaKnown RBP13.19□□□□□ -0.3
LRCH3-203ENST00000425562 PER2O15055 1255 aa13.19□□□□□ -0.3
LRCH3-203ENST00000425562 RGS5O15539 181 aa13.19□□□□□ -0.3
LRCH3-203ENST00000425562 DYRK3O43781 588 aa13.19□□□□□ -0.3
LRCH3-203ENST00000425562 ATXN1LP0C7T5 689 aaKnown RBP13.19□□□□□ -0.3
LRCH3-203ENST00000425562 RENBPP51606 427 aa13.19□□□□□ -0.3
LRCH3-203ENST00000425562 SLC35A2P78381 396 aa13.19□□□□□ -0.3
LRCH3-203ENST00000425562 CAMK2BQ13554 666 aa13.19□□□□□ -0.3
LRCH3-203ENST00000425562 PWP1Q13610 501 aa13.19□□□□□ -0.3
LRCH3-203ENST00000425562 XKR7Q5GH72 579 aa13.19□□□□□ -0.3
LRCH3-203ENST00000425562 PSAPL1Q6NUJ1 521 aa13.19□□□□□ -0.3
LRCH3-203ENST00000425562 TCAIMQ8N3R3 496 aa13.19□□□□□ -0.3
LRCH3-203ENST00000425562 LIX1Q8N485 282 aa13.19□□□□□ -0.3
LRCH3-203ENST00000425562 TTC29Q8NA56 475 aaPredicted RBP13.19□□□□□ -0.3
LRCH3-203ENST00000425562 FAM120BQ96EK7 910 aaKnown RBP13.19□□□□□ -0.3
LRCH3-203ENST00000425562 MYEOVQ96EZ4 313 aa13.19□□□□□ -0.3
LRCH3-203ENST00000425562 OR52E6Q96RD3 313 aa13.19□□□□□ -0.3
LRCH3-203ENST00000425562 CITED4Q96RK1 184 aa13.19□□□□□ -0.3
LRCH3-203ENST00000425562 DPH2Q9BQC3 489 aaPredicted RBP13.19□□□□□ -0.3
LRCH3-203ENST00000425562 PADI3Q9ULW8 664 aa13.19□□□□□ -0.3
LRCH3-203ENST00000425562 PRRC2BQ5JSZ5 2229 aaKnown RBP13.19□□□□□ -0.3
LRCH3-203ENST00000425562 DYTNA2CJ06 578 aa13.19□□□□□ -0.3
LRCH3-203ENST00000425562 MROH6A6NGR9 719 aa13.19□□□□□ -0.3
LRCH3-203ENST00000425562 CTDSP2O14595 271 aa13.19□□□□□ -0.3
LRCH3-203ENST00000425562 SEC22BO75396 215 aa13.19□□□□□ -0.3
LRCH3-203ENST00000425562 PEX11BO96011 259 aa13.19□□□□□ -0.3
LRCH3-203ENST00000425562 SLC14A1Q13336 389 aa13.19□□□□□ -0.3
LRCH3-203ENST00000425562 PCBP1Q15365 356 aaKnown RBP eCLIP13.19□□□□□ -0.3
LRCH3-203ENST00000425562 ZRANB3Q5FWF4 1079 aa13.19□□□□□ -0.3
LRCH3-203ENST00000425562 GALNT13Q8IUC8 556 aa13.19□□□□□ -0.3
LRCH3-203ENST00000425562 CACTIN-AS1Q8N1I8 211 aa13.19□□□□□ -0.3
LRCH3-203ENST00000425562 RTL3Q8N8U3 475 aaKnown RBP13.19□□□□□ -0.3
LRCH3-203ENST00000425562 EFHD2Q96C19 240 aaPredicted RBP13.19□□□□□ -0.3
LRCH3-203ENST00000425562 TSSK3Q96PN8 268 aa13.19□□□□□ -0.3
LRCH3-203ENST00000425562 KCNC2Q96PR1 638 aa13.19□□□□□ -0.3
LRCH3-203ENST00000425562 BRINP2Q9C0B6 783 aa13.19□□□□□ -0.3
LRCH3-203ENST00000425562 MUC13Q9H3R2 512 aa13.19□□□□□ -0.3
LRCH3-203ENST00000425562 NSUN3Q9H649 340 aaKnown RBP13.19□□□□□ -0.3
LRCH3-203ENST00000425562 MRM3Q9HC36 420 aaKnown RBP13.19□□□□□ -0.3
LRCH3-203ENST00000425562 TPRKBQ9Y3C4 175 aa13.19□□□□□ -0.3
LRCH3-203ENST00000425562 TESMINQ9Y4I5 508 aa13.19□□□□□ -0.3
LRCH3-203ENST00000425562 PCM1Q15154 2024 aa13.18□□□□□ -0.3
LRCH3-203ENST00000425562 E5RI56 91 aa13.18□□□□□ -0.3
LRCH3-203ENST00000425562 NBNO60934 754 aa13.18□□□□□ -0.3
LRCH3-203ENST00000425562 RPS17P08708 135 aaKnown RBP13.18□□□□□ -0.3
LRCH3-203ENST00000425562 CHRM5P08912 532 aaPredicted RBP13.18□□□□□ -0.3
LRCH3-203ENST00000425562 CXCR2P25025 360 aa13.18□□□□□ -0.3
LRCH3-203ENST00000425562 IDH2P48735 452 aaKnown RBP13.18□□□□□ -0.3
LRCH3-203ENST00000425562 STC1P52823 247 aa13.18□□□□□ -0.3
LRCH3-203ENST00000425562 ZXDBP98169 803 aa13.18□□□□□ -0.3
LRCH3-203ENST00000425562 TIGD7Q6NT04 549 aaPredicted RBP13.18□□□□□ -0.3
LRCH3-203ENST00000425562 FAM171BQ6P995 826 aa13.18□□□□□ -0.3
LRCH3-203ENST00000425562 MBOAT1Q6ZNC8 495 aa13.18□□□□□ -0.3
LRCH3-203ENST00000425562 CYP2U1Q7Z449 544 aa13.18□□□□□ -0.3
LRCH3-203ENST00000425562 CCDC71Q8IV32 467 aaPredicted RBP13.18□□□□□ -0.3
LRCH3-203ENST00000425562 SVOPQ8N4V2 548 aa13.18□□□□□ -0.3
LRCH3-203ENST00000425562 OR5K1Q8NHB7 308 aa13.18□□□□□ -0.3
LRCH3-203ENST00000425562 GTF2H4Q92759 462 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms