RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 SPASTQ9UBP0 616 aa15.27■□□□□ 0.04
SHOX2-202ENST00000425436 E5RI56 91 aa15.27■□□□□ 0.03
SHOX2-202ENST00000425436 CHUKO15111 745 aa15.27■□□□□ 0.03
SHOX2-202ENST00000425436 KERAO60938 352 aa15.27■□□□□ 0.03
SHOX2-202ENST00000425436 ACP5P13686 325 aa15.27■□□□□ 0.03
SHOX2-202ENST00000425436 CD59P13987 128 aa15.27■□□□□ 0.03
SHOX2-202ENST00000425436 AK4P27144 223 aaPredicted RBP15.27■□□□□ 0.03
SHOX2-202ENST00000425436 PGGT1BP53609 377 aa15.27■□□□□ 0.03
SHOX2-202ENST00000425436 HERVK_113P63132 956 aa15.27■□□□□ 0.03
SHOX2-202ENST00000425436 CTBSQ01459 385 aa15.27■□□□□ 0.03
SHOX2-202ENST00000425436 DEFB133Q30KQ1 61 aa15.27■□□□□ 0.03
SHOX2-202ENST00000425436 FBXW10Q5XX13 1052 aa15.27■□□□□ 0.03
SHOX2-202ENST00000425436 PAQR3Q6TCH7 311 aa15.27■□□□□ 0.03
SHOX2-202ENST00000425436 KANSL1Q7Z3B3 1105 aa15.27■□□□□ 0.03
SHOX2-202ENST00000425436 PIM3Q86V86 326 aa15.27■□□□□ 0.03
SHOX2-202ENST00000425436 TRAPPC5Q8IUR0 188 aa15.27■□□□□ 0.03
SHOX2-202ENST00000425436 HOMEZQ8IX15 550 aa15.27■□□□□ 0.03
SHOX2-202ENST00000425436 LSMEM2Q8N112 164 aa15.27■□□□□ 0.03
SHOX2-202ENST00000425436 EID2Q8N6I1 236 aa15.27■□□□□ 0.03
SHOX2-202ENST00000425436 SETD7Q8WTS6 366 aaKnown RBP15.27■□□□□ 0.03
SHOX2-202ENST00000425436 PDLIM5Q96HC4 596 aaKnown RBP15.27■□□□□ 0.03
SHOX2-202ENST00000425436 CAMK1GQ96NX5 476 aa15.27■□□□□ 0.03
SHOX2-202ENST00000425436 OR2M4Q96R27 311 aa15.27■□□□□ 0.03
SHOX2-202ENST00000425436 TBC1D10AQ9BXI6 508 aa15.27■□□□□ 0.03
SHOX2-202ENST00000425436 ERVK-6Q9BXR3 956 aa15.27■□□□□ 0.03
SHOX2-202ENST00000425436 P2RY12Q9H244 342 aa15.27■□□□□ 0.03
SHOX2-202ENST00000425436 C1orf21Q9H246 121 aa15.27■□□□□ 0.03
SHOX2-202ENST00000425436 RMI1Q9H9A7 625 aa15.27■□□□□ 0.03
SHOX2-202ENST00000425436 TCF7L2Q9NQB0 619 aa15.27■□□□□ 0.03
SHOX2-202ENST00000425436 SLC23A2Q9UGH3 650 aa15.27■□□□□ 0.03
SHOX2-202ENST00000425436 GNPTGQ9UJJ9 305 aa15.27■□□□□ 0.03
SHOX2-202ENST00000425436 CDYLQ9Y232 598 aa15.27■□□□□ 0.03
SHOX2-202ENST00000425436 BTBD3Q9Y2F9 522 aa15.27■□□□□ 0.03
SHOX2-202ENST00000425436 PRSS21Q9Y6M0 314 aa15.27■□□□□ 0.03
SHOX2-202ENST00000425436 ARID1BQ8NFD5 2236 aaPredicted RBP15.26■□□□□ 0.03
SHOX2-202ENST00000425436 ZFC3H1O60293 1989 aaKnown RBP15.26■□□□□ 0.03
SHOX2-202ENST00000425436 YY2O15391 372 aa15.26■□□□□ 0.03
SHOX2-202ENST00000425436 YKT6O15498 198 aa15.26■□□□□ 0.03
SHOX2-202ENST00000425436 SGTAO43765 313 aa15.26■□□□□ 0.03
SHOX2-202ENST00000425436 ZBTB14O43829 449 aa15.26■□□□□ 0.03
SHOX2-202ENST00000425436 PCDHGA12O60330 932 aa15.26■□□□□ 0.03
SHOX2-202ENST00000425436 CHRNGP07510 517 aa15.26■□□□□ 0.03
SHOX2-202ENST00000425436 ZNF883P0CG24 379 aa15.26■□□□□ 0.03
SHOX2-202ENST00000425436 ATP1B2P14415 290 aaPredicted RBP15.26■□□□□ 0.03
SHOX2-202ENST00000425436 CHRM3P20309 590 aa15.26■□□□□ 0.03
SHOX2-202ENST00000425436 MPSTP25325 297 aa15.26■□□□□ 0.03
SHOX2-202ENST00000425436 SUZ12Q15022 739 aaKnown RBP15.26■□□□□ 0.03
SHOX2-202ENST00000425436 ELOCQ15369 112 aa15.26■□□□□ 0.03
SHOX2-202ENST00000425436 ZRSR2Q15696 482 aaKnown RBP15.26■□□□□ 0.03
SHOX2-202ENST00000425436 DNAL1Q4LDG9 190 aa15.26■□□□□ 0.03
SHOX2-202ENST00000425436 ZNF678Q5SXM1 525 aa15.26■□□□□ 0.03
SHOX2-202ENST00000425436 ATG14Q6ZNE5 492 aa15.26■□□□□ 0.03
SHOX2-202ENST00000425436 FRMD7Q6ZUT3 714 aa15.26■□□□□ 0.03
SHOX2-202ENST00000425436 MAVSQ7Z434 540 aa15.26■□□□□ 0.03
SHOX2-202ENST00000425436 TAF8Q7Z7C8 310 aa15.26■□□□□ 0.03
SHOX2-202ENST00000425436 LRRTM4Q86VH4 590 aa15.26■□□□□ 0.03
SHOX2-202ENST00000425436 NRROSQ86YC3 692 aa15.26■□□□□ 0.03
SHOX2-202ENST00000425436 KIF2BQ8N4N8 673 aa15.26■□□□□ 0.03
SHOX2-202ENST00000425436 GPR21Q99679 349 aa15.26■□□□□ 0.03
SHOX2-202ENST00000425436 ZCCHC2Q9C0B9 1178 aaKnown RBP15.26■□□□□ 0.03
SHOX2-202ENST00000425436 KLHL42Q9P2K6 505 aa15.26■□□□□ 0.03
SHOX2-202ENST00000425436 ZDHHC2Q9UIJ5 367 aa15.26■□□□□ 0.03
SHOX2-202ENST00000425436 DHRS7Q9Y394 339 aa15.26■□□□□ 0.03
SHOX2-202ENST00000425436 PIKFYVEQ9Y2I7 2098 aa15.26■□□□□ 0.03
SHOX2-202ENST00000425436 IGLV3-16A0A075B6K0 115 aa15.25■□□□□ 0.03
SHOX2-202ENST00000425436 KMOO15229 486 aa15.25■□□□□ 0.03
SHOX2-202ENST00000425436 SH3BP5O60239 455 aa15.25■□□□□ 0.03
SHOX2-202ENST00000425436 POP7O75817 140 aaKnown RBP15.25■□□□□ 0.03
SHOX2-202ENST00000425436 KRT16P08779 473 aa15.25■□□□□ 0.03
SHOX2-202ENST00000425436 GIMD1P0DJR0 217 aa15.25■□□□□ 0.03
SHOX2-202ENST00000425436 EZRP15311 586 aaKnown RBP15.25■□□□□ 0.03
SHOX2-202ENST00000425436 PBLDP30039 288 aaPredicted RBP15.25■□□□□ 0.03
SHOX2-202ENST00000425436 SLC14A1Q13336 389 aa15.25■□□□□ 0.03
SHOX2-202ENST00000425436 SH2D4BQ5SQS7 431 aa15.25■□□□□ 0.03
SHOX2-202ENST00000425436 PTRHD1Q6GMV3 140 aaKnown RBP15.25■□□□□ 0.03
SHOX2-202ENST00000425436 SLC30A9Q6PML9 568 aa15.25■□□□□ 0.03
SHOX2-202ENST00000425436 DBX2Q6ZNG2 339 aa15.25■□□□□ 0.03
SHOX2-202ENST00000425436 C11orf96Q7Z7L8 435 aa15.25■□□□□ 0.03
SHOX2-202ENST00000425436 GPBAR1Q8TDU6 330 aa15.25■□□□□ 0.03
SHOX2-202ENST00000425436 ATOH8Q96SQ7 321 aa15.25■□□□□ 0.03
SHOX2-202ENST00000425436 TRNAU1APQ9NX07 287 aaKnown RBP15.25■□□□□ 0.03
SHOX2-202ENST00000425436 ARMCX1Q9P291 453 aa15.25■□□□□ 0.03
SHOX2-202ENST00000425436 RNF112Q9ULX5 631 aa15.25■□□□□ 0.03
SHOX2-202ENST00000425436 DOLKQ9UPQ8 538 aa15.25■□□□□ 0.03
SHOX2-202ENST00000425436 KCNK6Q9Y257 313 aa15.25■□□□□ 0.03
SHOX2-202ENST00000425436 MED16Q9Y2X0 877 aa15.25■□□□□ 0.03
SHOX2-202ENST00000425436 ARHGEF17Q96PE2 2063 aaPredicted RBP15.25■□□□□ 0.03
SHOX2-202ENST00000425436 NEMP2A6NFY4 417 aa15.24■□□□□ 0.03
SHOX2-202ENST00000425436 GPR89AB7ZAQ6 455 aa15.24■□□□□ 0.03
SHOX2-202ENST00000425436 CFAP99D6REC4 459 aa15.24■□□□□ 0.03
SHOX2-202ENST00000425436 STX16-NPEPL1H3BU86 382 aa15.24■□□□□ 0.03
SHOX2-202ENST00000425436 TRIM38O00635 465 aa15.24■□□□□ 0.03
SHOX2-202ENST00000425436 STX16O14662 325 aa15.24■□□□□ 0.03
SHOX2-202ENST00000425436 WFS1O76024 890 aa15.24■□□□□ 0.03
SHOX2-202ENST00000425436 ANXA6P08133 673 aa15.24■□□□□ 0.03
SHOX2-202ENST00000425436 GPR89BP0CG08 455 aa15.24■□□□□ 0.03
SHOX2-202ENST00000425436 MYF5P13349 255 aa15.24■□□□□ 0.03
SHOX2-202ENST00000425436 NCF2P19878 526 aaPredicted RBP15.24■□□□□ 0.03
SHOX2-202ENST00000425436 HNRNPH1P31943 449 aaKnown RBP15.24■□□□□ 0.03
SHOX2-202ENST00000425436 NSG1P42857 185 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms