RNA–Protein interactions for RNA: ENST00000425428.6

CD44-207, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,768 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-207ENST00000425428 SLC37A2Q8TED4 501 aa9.83□□□□□ -0.84
CD44-207ENST00000425428 CAMK1GQ96NX5 476 aa9.83□□□□□ -0.84
CD44-207ENST00000425428 CAPS2Q9BXY5 557 aa9.83□□□□□ -0.84
CD44-207ENST00000425428 KIR3DX1Q9H7L2 352 aa9.83□□□□□ -0.84
CD44-207ENST00000425428 INTS9Q9NV88 658 aaKnown RBP9.83□□□□□ -0.84
CD44-207ENST00000425428 UCKL1Q9NWZ5 548 aa9.83□□□□□ -0.84
CD44-207ENST00000425428 PDE10AQ9Y233 779 aa9.83□□□□□ -0.84
CD44-207ENST00000425428 STK38LQ9Y2H1 464 aa9.83□□□□□ -0.84
CD44-207ENST00000425428 WDR37Q9Y2I8 494 aa9.83□□□□□ -0.84
CD44-207ENST00000425428 PCDH15Q96QU1 1955 aa9.82□□□□□ -0.84
CD44-207ENST00000425428 FAM221BA6H8Z2 402 aa9.82□□□□□ -0.84
CD44-207ENST00000425428 ARHGEF33A8MVX0 844 aa9.82□□□□□ -0.84
CD44-207ENST00000425428 FOXO6A8MYZ6 492 aa9.82□□□□□ -0.84
CD44-207ENST00000425428 PROB1E7EW31 1015 aa9.82□□□□□ -0.84
CD44-207ENST00000425428 BIRC5O15392 142 aa9.82□□□□□ -0.84
CD44-207ENST00000425428 NUDT21O43809 227 aaKnown RBP9.82□□□□□ -0.84
CD44-207ENST00000425428 TYROBPO43914 113 aa9.82□□□□□ -0.84
CD44-207ENST00000425428 PLIN3O60664 434 aa9.82□□□□□ -0.84
CD44-207ENST00000425428 KATNA1O75449 491 aa9.82□□□□□ -0.84
CD44-207ENST00000425428 CCNDBP1O95273 360 aa9.82□□□□□ -0.84
CD44-207ENST00000425428 WISP3O95389 354 aaPredicted RBP9.82□□□□□ -0.84
CD44-207ENST00000425428 CELA2BP08218 269 aaPredicted RBP9.82□□□□□ -0.84
CD44-207ENST00000425428 GLB1P16278 677 aa9.82□□□□□ -0.84
CD44-207ENST00000425428 SLC19A1P41440 591 aa9.82□□□□□ -0.84
CD44-207ENST00000425428 FASLGP48023 281 aa9.82□□□□□ -0.84
CD44-207ENST00000425428 CSRP3P50461 194 aa9.82□□□□□ -0.84
CD44-207ENST00000425428 RAB28P51157 221 aa9.82□□□□□ -0.84
CD44-207ENST00000425428 DLG1Q12959 904 aa9.82□□□□□ -0.84
CD44-207ENST00000425428 NAA25Q14CX7 972 aa9.82□□□□□ -0.84
CD44-207ENST00000425428 SF3A2Q15428 464 aaKnown RBP9.82□□□□□ -0.84
CD44-207ENST00000425428 OR4D1Q15615 310 aa9.82□□□□□ -0.84
CD44-207ENST00000425428 PFKFB4Q16877 469 aa9.82□□□□□ -0.84
CD44-207ENST00000425428 ATG16L1Q676U5 607 aa9.82□□□□□ -0.84
CD44-207ENST00000425428 TCEAL6Q6IPX3 200 aa9.82□□□□□ -0.84
CD44-207ENST00000425428 CAPN13Q6MZZ7 669 aaPredicted RBP9.82□□□□□ -0.84
CD44-207ENST00000425428 METTL2BQ6P1Q9 378 aaKnown RBP9.82□□□□□ -0.84
CD44-207ENST00000425428 C16orf46Q6P387 395 aa9.82□□□□□ -0.84
CD44-207ENST00000425428 OGFOD3Q6PK18 319 aa9.82□□□□□ -0.84
CD44-207ENST00000425428 OOSP2Q86WS3 158 aa9.82□□□□□ -0.84
CD44-207ENST00000425428 NAGSQ8N159 534 aa9.82□□□□□ -0.84
CD44-207ENST00000425428 SLC25A45Q8N413 288 aa9.82□□□□□ -0.84
CD44-207ENST00000425428 ARL14Q8N4G2 192 aa9.82□□□□□ -0.84
CD44-207ENST00000425428 OR10G6Q8NH81 332 aa9.82□□□□□ -0.84
CD44-207ENST00000425428 TCEAL3Q969E4 200 aa9.82□□□□□ -0.84
CD44-207ENST00000425428 ATP6V1E2Q96A05 226 aa9.82□□□□□ -0.84
CD44-207ENST00000425428 PTERQ96BW5 349 aa9.82□□□□□ -0.84
CD44-207ENST00000425428 MED8Q96G25 268 aa9.82□□□□□ -0.84
CD44-207ENST00000425428 CDC6Q99741 560 aa9.82□□□□□ -0.84
CD44-207ENST00000425428 UCK1Q9HA47 277 aa9.82□□□□□ -0.84
CD44-207ENST00000425428 IL21RQ9HBE5 538 aa9.82□□□□□ -0.84
CD44-207ENST00000425428 ZNF358Q9NW07 568 aa9.82□□□□□ -0.84
CD44-207ENST00000425428 OR6C2Q9NZP2 312 aa9.82□□□□□ -0.84
CD44-207ENST00000425428 LRIT1Q9P2V4 623 aa9.82□□□□□ -0.84
CD44-207ENST00000425428 COPG2Q9UBF2 871 aa9.82□□□□□ -0.84
CD44-207ENST00000425428 OPTCQ9UBM4 332 aa9.82□□□□□ -0.84
CD44-207ENST00000425428 FTSJ1Q9UET6 329 aa9.82□□□□□ -0.84
CD44-207ENST00000425428 PADI4Q9UM07 663 aa9.82□□□□□ -0.84
CD44-207ENST00000425428 DYRK1BQ9Y463 629 aa9.82□□□□□ -0.84
CD44-207ENST00000425428 PRR19A6NJB7 356 aa9.81□□□□□ -0.84
CD44-207ENST00000425428 STX16-NPEPL1H3BU86 382 aa9.81□□□□□ -0.84
CD44-207ENST00000425428 UBXN8O00124 270 aa9.81□□□□□ -0.84
CD44-207ENST00000425428 TK2O00142 265 aa9.81□□□□□ -0.84
CD44-207ENST00000425428 MYO1CO00159 1063 aa9.81□□□□□ -0.84
CD44-207ENST00000425428 STX16O14662 325 aa9.81□□□□□ -0.84
CD44-207ENST00000425428 TRIM13O60858 407 aa9.81□□□□□ -0.84
CD44-207ENST00000425428 STK16O75716 305 aa9.81□□□□□ -0.84
CD44-207ENST00000425428 LDOC1O95751 146 aaPredicted RBP9.81□□□□□ -0.84
CD44-207ENST00000425428 PROCP04070 461 aa9.81□□□□□ -0.84
CD44-207ENST00000425428 GPR3P46089 330 aa9.81□□□□□ -0.84
CD44-207ENST00000425428 PNLIPRP1P54315 467 aa9.81□□□□□ -0.84
CD44-207ENST00000425428 EPHA4P54764 986 aa9.81□□□□□ -0.84
CD44-207ENST00000425428 TUBB8Q3ZCM7 444 aa9.81□□□□□ -0.84
CD44-207ENST00000425428 LIPMQ5VYY2 423 aa9.81□□□□□ -0.84
CD44-207ENST00000425428 SBSNQ6UWP8 590 aa9.81□□□□□ -0.84
CD44-207ENST00000425428 ZYG11AQ6WRX3 759 aa9.81□□□□□ -0.84
CD44-207ENST00000425428 TMEM26Q6ZUK4 368 aa9.81□□□□□ -0.84
CD44-207ENST00000425428 SH2D5Q6ZV89 423 aa9.81□□□□□ -0.84
CD44-207ENST00000425428 AMIGO1Q86WK6 493 aa9.81□□□□□ -0.84
CD44-207ENST00000425428 KIRREL3Q8IZU9 778 aa9.81□□□□□ -0.84
CD44-207ENST00000425428 TBC1D19Q8N5T2 526 aa9.81□□□□□ -0.84
CD44-207ENST00000425428 FAM181AQ8N9Y4 354 aa9.81□□□□□ -0.84
CD44-207ENST00000425428 SMPDL3AQ92484 453 aa9.81□□□□□ -0.84
CD44-207ENST00000425428 FBXL8Q96CD0 374 aa9.81□□□□□ -0.84
CD44-207ENST00000425428 PHF21BQ96EK2 531 aa9.81□□□□□ -0.84
CD44-207ENST00000425428 ATOH8Q96SQ7 321 aa9.81□□□□□ -0.84
CD44-207ENST00000425428 MIPEPQ99797 713 aa9.81□□□□□ -0.84
CD44-207ENST00000425428 HAUS8Q9BT25 410 aa9.81□□□□□ -0.84
CD44-207ENST00000425428 SLC32A1Q9H598 525 aa9.81□□□□□ -0.84
CD44-207ENST00000425428 EML4Q9HC35 981 aaKnown RBP9.81□□□□□ -0.84
CD44-207ENST00000425428 SLC40A1Q9NP59 571 aa9.81□□□□□ -0.84
CD44-207ENST00000425428 CCDC177Q9NQR7 707 aaPredicted RBP9.81□□□□□ -0.84
CD44-207ENST00000425428 INTS7Q9NVH2 962 aaKnown RBP9.81□□□□□ -0.84
CD44-207ENST00000425428 KCNK4Q9NYG8 393 aa9.81□□□□□ -0.84
CD44-207ENST00000425428 ZNF624Q9P2J8 865 aaPredicted RBP9.81□□□□□ -0.84
CD44-207ENST00000425428 ADAMTS6Q9UKP5 1117 aa9.81□□□□□ -0.84
CD44-207ENST00000425428 ENTPD2Q9Y5L3 495 aa9.81□□□□□ -0.84
CD44-207ENST00000425428 CPED1A4D0V7 1026 aa9.8□□□□□ -0.84
CD44-207ENST00000425428 A6NCN8 305 aa9.8□□□□□ -0.84
CD44-207ENST00000425428 CLGNO14967 610 aa9.8□□□□□ -0.84
CD44-207ENST00000425428 SIGLEC6O43699 453 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms