RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 KIAA1958Q8N8K9 716 aa11.06□□□□□ -0.64
SEC61A1-202ENST00000424880 TTC29Q8NA56 475 aaPredicted RBP11.06□□□□□ -0.64
SEC61A1-202ENST00000424880 REXO5Q96IC2 774 aaKnown RBP11.06□□□□□ -0.64
SEC61A1-202ENST00000424880 RNF170Q96K19 258 aa11.06□□□□□ -0.64
SEC61A1-202ENST00000424880 TSEN34Q9BSV6 310 aaKnown RBP11.06□□□□□ -0.64
SEC61A1-202ENST00000424880 ITPAQ9BY32 194 aa11.06□□□□□ -0.64
SEC61A1-202ENST00000424880 NSMCE4AQ9NXX6 385 aa11.06□□□□□ -0.64
SEC61A1-202ENST00000424880 USE1Q9NZ43 259 aa11.06□□□□□ -0.64
SEC61A1-202ENST00000424880 ZMYM5Q9UJ78 669 aa11.06□□□□□ -0.64
SEC61A1-202ENST00000424880 HSPB11Q9Y547 144 aa11.06□□□□□ -0.64
SEC61A1-202ENST00000424880 ZBTB42B2RXF5 422 aa11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 TRIM77I1YAP6 450 aa11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 CDC7O00311 574 aa11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 TNFRSF21O75509 655 aa11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 MATN4O95460 622 aa11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 USP17L7P0C7H9 530 aa11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 AKAP5P24588 427 aa11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 SLC26A3P40879 764 aa11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 CTSKP43235 329 aa11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 TOP3AQ13472 1001 aaPredicted RBP11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 PON2Q15165 354 aa11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 TSNQ15631 228 aaKnown RBP11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 TYSND1Q2T9J0 566 aa11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 RIOX2Q8IUF8 465 aa11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 CAMKK1Q8N5S9 505 aa11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 ATG16L2Q8NAA4 619 aa11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 ZNF784Q8NCA9 323 aaPredicted RBP11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 C7orf57Q8NEG2 295 aa11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 GPR151Q8TDV0 419 aa11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 DEDD2Q8WXF8 326 aa11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 TBATAQ96M53 351 aa11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 COPS4Q9BT78 406 aa11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 TKTL2Q9H0I9 626 aa11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 ABI2Q9NYB9 513 aaPredicted RBP11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 AKT3Q9Y243 479 aa11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 POLR3HQ9Y535 204 aaPredicted RBP11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 A0A0B4J293 547 aa11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 GAS2O43903 313 aaKnown RBP11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 ZNF780AO75290 641 aaPredicted RBP11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 GSTM1P09488 218 aa11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 TNFSF8P32971 234 aa11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 SLC19A1P41440 591 aa11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 IDH2P48735 452 aaKnown RBP11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 PRKG2Q13237 762 aa11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 MFSD10Q14728 455 aa11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 STARD3Q14849 445 aa11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 BTBD16Q32M84 506 aa11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 RFTN2Q52LD8 501 aaPredicted RBP11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 C6orf136Q5SQH8 315 aa11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 NDUFAF5Q5TEU4 345 aa11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 IER5Q5VY09 327 aa11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 KANK2Q63ZY3 851 aa11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 VTCN1Q7Z7D3 282 aa11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 KRTCAP2Q8N6L1 136 aa11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 FLCNQ8NFG4 579 aa11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 SLC38A4Q969I6 547 aa11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 RNF31Q96EP0 1072 aa11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 SLC39A13Q96H72 371 aa11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 KCNC2Q96PR1 638 aa11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 TTPALQ9BTX7 342 aa11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 UGT2B28Q9BY64 529 aa11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 MUC13Q9H3R2 512 aa11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 TM9SF3Q9HD45 589 aa11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 AIG1Q9NVV5 245 aa11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 PDP1Q9P0J1 537 aaPredicted RBP11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 SLC6A14Q9UN76 642 aa11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 CXCR6O00574 342 aa11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 SCAMP3O14828 347 aaKnown RBP11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 KIAA0513O60268 411 aa11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 NOS1APO75052 506 aaPredicted RBP11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 TULP3O75386 442 aa11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 STSP08842 583 aa11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 CNPP09543 421 aaKnown RBP11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 CD1DP15813 335 aa11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 PIK3CBP42338 1070 aa11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 ATN1P54259 1190 aaPredicted RBP11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 SNTA1Q13424 505 aa11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 EFR3AQ14156 821 aa11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 DOC2BQ14184 412 aa11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 PARP15Q460N3 678 aa11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 SPDYE7PQ495Y7 208 aa11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 GPAT3Q53EU6 434 aa11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 TOR2AQ5JU69 321 aa11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 CATSPERGQ6ZRH7 1159 aa11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 OTOP2Q7RTS6 562 aa11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 LAX1Q8IWV1 398 aa11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 YIPF7Q8N8F6 280 aa11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 PJA1Q8NG27 643 aa11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 COQ8BQ96D53 544 aa11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 C8orf48Q96LL4 319 aa11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 KLHL5Q96PQ7 755 aa11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 FZD8Q9H461 694 aa11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 ACOXLQ9NUZ1 547 aa11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 RBM22Q9NW64 420 aaKnown RBP eCLIP11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 MIOSQ9NXC5 875 aa11.05□□□□□ -0.64
SEC61A1-202ENST00000424880 PNMA8CA0A1B0GUJ8 204 aa11.04□□□□□ -0.64
SEC61A1-202ENST00000424880 A0A1W2PQ09 198 aa11.04□□□□□ -0.64
SEC61A1-202ENST00000424880 ADM5C9JUS6 153 aa11.04□□□□□ -0.64
SEC61A1-202ENST00000424880 WBP4O75554 376 aaKnown RBP11.04□□□□□ -0.64
SEC61A1-202ENST00000424880 ARIH2O95376 493 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms