RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 EPN2O95208 641 aa13.06□□□□□ -0.32
PRPF39-202ENST00000424478 TYRP1P17643 537 aa13.06□□□□□ -0.32
PRPF39-202ENST00000424478 MAPK9P45984 424 aa13.06□□□□□ -0.32
PRPF39-202ENST00000424478 PPP1CAP62136 330 aa13.06□□□□□ -0.32
PRPF39-202ENST00000424478 PEAR1Q5VY43 1037 aaPredicted RBP13.06□□□□□ -0.32
PRPF39-202ENST00000424478 ZNF438Q7Z4V0 828 aa13.06□□□□□ -0.32
PRPF39-202ENST00000424478 TRIM48Q8IWZ4 208 aa13.06□□□□□ -0.32
PRPF39-202ENST00000424478 SYTL1Q8IYJ3 562 aa13.06□□□□□ -0.32
PRPF39-202ENST00000424478 OR5K2Q8NHB8 316 aa13.06□□□□□ -0.32
PRPF39-202ENST00000424478 ZNF480Q8WV37 535 aa13.06□□□□□ -0.32
PRPF39-202ENST00000424478 PPM1MQ96MI6 270 aa13.06□□□□□ -0.32
PRPF39-202ENST00000424478 GATA5Q9BWX5 397 aaPredicted RBP13.06□□□□□ -0.32
PRPF39-202ENST00000424478 TNFRSF12AQ9NP84 129 aa13.06□□□□□ -0.32
PRPF39-202ENST00000424478 SEMA4BQ9NPR2 832 aaPredicted RBP13.06□□□□□ -0.32
PRPF39-202ENST00000424478 CPNE7Q9UBL6 633 aa13.06□□□□□ -0.32
PRPF39-202ENST00000424478 KLHL20Q9Y2M5 609 aa13.06□□□□□ -0.32
PRPF39-202ENST00000424478 FIS1Q9Y3D6 152 aa13.06□□□□□ -0.32
PRPF39-202ENST00000424478 CEP250Q9BV73 2442 aa13.06□□□□□ -0.32
PRPF39-202ENST00000424478 NRP2O60462 931 aa13.06□□□□□ -0.32
PRPF39-202ENST00000424478 SUPT7LO94864 414 aa13.06□□□□□ -0.32
PRPF39-202ENST00000424478 ANXA6P08133 673 aa13.06□□□□□ -0.32
PRPF39-202ENST00000424478 HIST1H2AGP0C0S8 130 aaPredicted RBP13.06□□□□□ -0.32
PRPF39-202ENST00000424478 HIST1H2ADP20671 130 aa13.06□□□□□ -0.32
PRPF39-202ENST00000424478 CYP2A7P20853 494 aa13.06□□□□□ -0.32
PRPF39-202ENST00000424478 IMPA1P29218 277 aa13.06□□□□□ -0.32
PRPF39-202ENST00000424478 EPHA8P29322 1005 aaPredicted RBP13.06□□□□□ -0.32
PRPF39-202ENST00000424478 RPA4Q13156 261 aa13.06□□□□□ -0.32
PRPF39-202ENST00000424478 NAE1Q13564 534 aa13.06□□□□□ -0.32
PRPF39-202ENST00000424478 PLCL1Q15111 1095 aa13.06□□□□□ -0.32
PRPF39-202ENST00000424478 SLC23A3Q6PIS1 610 aa13.06□□□□□ -0.32
PRPF39-202ENST00000424478 ABRAXAS1Q6UWZ7 409 aa13.06□□□□□ -0.32
PRPF39-202ENST00000424478 EID2Q8N6I1 236 aa13.06□□□□□ -0.32
PRPF39-202ENST00000424478 OR10G6Q8NH81 332 aa13.06□□□□□ -0.32
PRPF39-202ENST00000424478 MCOLN3Q8TDD5 553 aa13.06□□□□□ -0.32
PRPF39-202ENST00000424478 RHBDF1Q96CC6 855 aa13.06□□□□□ -0.32
PRPF39-202ENST00000424478 HIST1H2AHQ96KK5 128 aa13.06□□□□□ -0.32
PRPF39-202ENST00000424478 HIST1H2AJQ99878 128 aa13.06□□□□□ -0.32
PRPF39-202ENST00000424478 H2AFJQ9BTM1 129 aa13.06□□□□□ -0.32
PRPF39-202ENST00000424478 KLHL25Q9H0H3 589 aa13.06□□□□□ -0.32
PRPF39-202ENST00000424478 OXSMQ9NWU1 459 aa13.06□□□□□ -0.32
PRPF39-202ENST00000424478 STOX2Q9P2F5 926 aaPredicted RBP13.06□□□□□ -0.32
PRPF39-202ENST00000424478 A0A1B0GTQ1 180 aa13.05□□□□□ -0.32
PRPF39-202ENST00000424478 C8GP07360 202 aa13.05□□□□□ -0.32
PRPF39-202ENST00000424478 PRDX3P30048 256 aaKnown RBP13.05□□□□□ -0.32
PRPF39-202ENST00000424478 ARL1P40616 181 aaPredicted RBP13.05□□□□□ -0.32
PRPF39-202ENST00000424478 SEC24CP53992 1094 aa13.05□□□□□ -0.32
PRPF39-202ENST00000424478 PTCHD3Q3KNS1 767 aa13.05□□□□□ -0.32
PRPF39-202ENST00000424478 LINC01555Q8NAE3 123 aa13.05□□□□□ -0.32
PRPF39-202ENST00000424478 PPP1R14CQ8TAE6 165 aa13.05□□□□□ -0.32
PRPF39-202ENST00000424478 RHEBL1Q8TAI7 183 aa13.05□□□□□ -0.32
PRPF39-202ENST00000424478 CAMK1GQ96NX5 476 aa13.05□□□□□ -0.32
PRPF39-202ENST00000424478 PITPNM3Q9BZ71 974 aa13.05□□□□□ -0.32
PRPF39-202ENST00000424478 FAM107BQ9H098 131 aa13.05□□□□□ -0.32
PRPF39-202ENST00000424478 TRIT1Q9H3H1 467 aaKnown RBP13.05□□□□□ -0.32
PRPF39-202ENST00000424478 PARD6AQ9NPB6 346 aa13.05□□□□□ -0.32
PRPF39-202ENST00000424478 INTS7Q9NVH2 962 aaKnown RBP13.05□□□□□ -0.32
PRPF39-202ENST00000424478 KLHL42Q9P2K6 505 aa13.05□□□□□ -0.32
PRPF39-202ENST00000424478 MARCOQ9UEW3 520 aaPredicted RBP13.05□□□□□ -0.32
PRPF39-202ENST00000424478 SLC22A14Q9Y267 594 aa13.05□□□□□ -0.32
PRPF39-202ENST00000424478 LMO7DNF2Z398 122 aa13.05□□□□□ -0.32
PRPF39-202ENST00000424478 KHNYNO15037 678 aaKnown RBP13.05□□□□□ -0.32
PRPF39-202ENST00000424478 NOBOXO60393 691 aa13.05□□□□□ -0.32
PRPF39-202ENST00000424478 SMIM24O75264 130 aa13.05□□□□□ -0.32
PRPF39-202ENST00000424478 IPO13O94829 963 aaKnown RBP13.05□□□□□ -0.32
PRPF39-202ENST00000424478 ATXN3P54252 364 aaPredicted RBP13.05□□□□□ -0.32
PRPF39-202ENST00000424478 CBX1P83916 185 aa13.05□□□□□ -0.32
PRPF39-202ENST00000424478 SLC35F3Q8IY50 421 aa13.05□□□□□ -0.32
PRPF39-202ENST00000424478 FAM174AQ8TBP5 190 aa13.05□□□□□ -0.32
PRPF39-202ENST00000424478 NUSAP1Q9BXS6 441 aaKnown RBP13.05□□□□□ -0.32
PRPF39-202ENST00000424478 SPHK1Q9NYA1 384 aa13.05□□□□□ -0.32
PRPF39-202ENST00000424478 SPTBN2O15020 2390 aa13.05□□□□□ -0.32
PRPF39-202ENST00000424478 TMEM233B4DJY2 109 aa13.04□□□□□ -0.32
PRPF39-202ENST00000424478 VIPP01282 170 aa13.04□□□□□ -0.32
PRPF39-202ENST00000424478 ATP5F1P24539 256 aaPredicted RBP13.04□□□□□ -0.32
PRPF39-202ENST00000424478 MDH1P40925 334 aaKnown RBP13.04□□□□□ -0.32
PRPF39-202ENST00000424478 HHEXQ03014 270 aa13.04□□□□□ -0.32
PRPF39-202ENST00000424478 BST1Q10588 318 aa13.04□□□□□ -0.32
PRPF39-202ENST00000424478 NKAIN2Q5VXU1 208 aa13.04□□□□□ -0.32
PRPF39-202ENST00000424478 AGTRAPQ6RW13 159 aa13.04□□□□□ -0.32
PRPF39-202ENST00000424478 GKN2Q86XP6 184 aa13.04□□□□□ -0.32
PRPF39-202ENST00000424478 SFRP1Q8N474 314 aa13.04□□□□□ -0.32
PRPF39-202ENST00000424478 ARL14Q8N4G2 192 aa13.04□□□□□ -0.32
PRPF39-202ENST00000424478 SAP25Q8TEE9 199 aa13.04□□□□□ -0.32
PRPF39-202ENST00000424478 ZBTB26Q9HCK0 441 aa13.04□□□□□ -0.32
PRPF39-202ENST00000424478 ICKQ9UPZ9 632 aa13.04□□□□□ -0.32
PRPF39-202ENST00000424478 TCP11X1B4DZS4 312 aa13.04□□□□□ -0.32
PRPF39-202ENST00000424478 KATNA1O75449 491 aa13.04□□□□□ -0.32
PRPF39-202ENST00000424478 KITP10721 976 aa13.04□□□□□ -0.32
PRPF39-202ENST00000424478 PIK3CGP48736 1102 aa13.04□□□□□ -0.32
PRPF39-202ENST00000424478 KPNA2P52292 529 aaKnown RBP13.04□□□□□ -0.32
PRPF39-202ENST00000424478 UNC50Q53HI1 259 aa13.04□□□□□ -0.32
PRPF39-202ENST00000424478 RASGRP3Q8IV61 690 aa13.04□□□□□ -0.32
PRPF39-202ENST00000424478 DCUN1D3Q8IWE4 304 aa13.04□□□□□ -0.32
PRPF39-202ENST00000424478 Q8N9G6 341 aaPredicted RBP13.04□□□□□ -0.32
PRPF39-202ENST00000424478 OR52B6Q8NGF0 335 aa13.04□□□□□ -0.32
PRPF39-202ENST00000424478 OR9A1PQ8NGU1 263 aa13.04□□□□□ -0.32
PRPF39-202ENST00000424478 TRPC4APQ8TEL6 797 aa13.04□□□□□ -0.32
PRPF39-202ENST00000424478 PPP1R36Q96LQ0 422 aa13.04□□□□□ -0.32
PRPF39-202ENST00000424478 MENTQ9BUN1 341 aa13.04□□□□□ -0.32
PRPF39-202ENST00000424478 SLC40A1Q9NP59 571 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms